FFCP PHASE1:Mm9::chr10:127080230..127080241,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20852|HGNC=|UniProt=D3YU28|association_with_transcript=172bp_to_ENSMUST00000120279_5end|description=CAGE_peak_6_at_Stat6_5end|id=chr10:127080230..127080241,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,1.36e-24,6;CL:0000187,1.36e-24,6;CL:0000056,1.36e-24,6;CL:0000222,5.10e-21,7;CL:0000355,3.02e-16,9;CL:0000192,9.26e-14,3;CL:0000359,9.26e-14,3;CL:0002539,9.26e-14,3;CL:0000514,9.26e-14,3;CL:0002494,1.70e-12,3;CL:0000737,1.70e-12,3;CL:0000746,1.70e-12,3;CL:0000513,1.70e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.02e-16,9;UBERON:0002036,3.02e-16,9;UBERON:0002385,3.02e-16,9;UBERON:0000486,3.02e-16,9;UBERON:0007503,3.02e-16,9;UBERON:0001015,3.02e-16,9;UBERON:0002329,3.02e-16,9;UBERON:0003082,3.02e-16,9;UBERON:0003059,3.02e-16,9;UBERON:0007282,3.02e-16,9;UBERON:0004290,3.02e-16,9;UBERON:0009618,3.02e-16,9;UBERON:0000383,1.42e-14,10;UBERON:0001135,9.26e-14,3;UBERON:0004237,9.26e-14,3;UBERON:0004695,9.26e-14,3;UBERON:0002111,9.26e-14,3;UBERON:0004178,9.26e-14,3;UBERON:0007524,3.33e-13,11;UBERON:0003077,3.33e-13,11;UBERON:0007285,3.33e-13,11;UBERON:0000947,1.94e-10,4;UBERON:0001637,1.94e-10,4;UBERON:0004573,1.94e-10,4;UBERON:0003509,1.94e-10,4;UBERON:0004571,1.94e-10,4;UBERON:0010191,1.94e-10,4;UBERON:0004572,1.94e-10,4;UBERON:0000055,1.95e-08,5;UBERON:0007500,1.95e-08,5;UBERON:0001981,1.95e-08,5;UBERON:0002049,1.95e-08,5;UBERON:0007798,1.95e-08,5;UBERON:0004537,1.95e-08,5;UBERON:0006965,1.95e-08,5|phase1_expression=0,0,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.467225281191051,0,0,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0,0.635030673459631,0,0,0,0,0,0,0,0,1.76469446409304,2.04913645487534,0,3.9028013572429,2.43304634926835,2.20256102594018,2.34717403304412,0.218025156380447,0.659058548203415,0.777719596297134,0,0,0,0,0,2.31533492432352,1.14613375975503,1.03134418455488,0,0,0,1.0165335962074,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,1.12552522006336,0.15279824777681,0,0,0.186399445825301,0.530083353332288,0.604572480854284,0.289864488701678,0,2.719885334831,0,0.649776417447669,0.896053774194671,0.561777680527007,1.70430322578058,0.519572009205738,1.7666978725517,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0,0.505524445014783,0.22836775943812,0,0.445326417194474,0,0,0.230615497256059,0.60289056221049,0.470354828542819,0.125666591329675,0.494389935468748,0.578397427679647,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0.305518091550949,0,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0.702213187313235,0.257347907114715,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.864552199498777,0.398282546508734,0.189667900953082,0,0,0.610953983535943,0,0.140271639780637,0.379419222745544,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,0.923765950833023,0.37898282354097,0.325929952884052,0.169745085775188,0.704070744865506,0.167506257441816,0.952174563544055,0.585400943573396,0.788175720530955,1.10732344824387,0.797273843287435,0.327726629431476,0.863424909329478,0.433947175744535,1.50791283939272,0.54390568381871,0,0.551873492609465,0,0,1.80328439914343,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.425820255624806,0.712262414669021,0.325773918707152,0.494910368917606,0,0,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0.214337035031592,0.354680467284547,0.713475270408282,0.493647061806363,0.304464949114599,0.469343416127421,5.08396970073168,0.441056796109924,0.32977250588296,0.645857706783622,0.301564624640779,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0.555583582109135,0.188368457004691,0,0.228778173206523,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0.609958401380546,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.743881101528023,0.26175594198403,0.388844919875379,0,0,0,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,1.35232715822533,1.50145980360946,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.824140228955577,0,0,0,0.188626341386076,0,0.192075457214608,0.287177344778066,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0,0,0.237270036248348,0,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p6@Stat6}} | ||
|EntrezGene=20852 | |||
|HGNC= | |||
|UniProt=D3YU28 | |||
|association_with_transcript=172bp_to_ENSMUST00000120279_5end | |||
|description=CAGE_peak_6_at_Stat6_5end | |||
|id=chr10:127080230..127080241,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.36e-24,6;CL:0000187,1.36e-24,6;CL:0000056,1.36e-24,6;CL:0000222,5.10e-21,7;CL:0000355,3.02e-16,9;CL:0000192,9.26e-14,3;CL:0000359,9.26e-14,3;CL:0002539,9.26e-14,3;CL:0000514,9.26e-14,3;CL:0002494,1.70e-12,3;CL:0000737,1.70e-12,3;CL:0000746,1.70e-12,3;CL:0000513,1.70e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.02e-16,9;UBERON:0002036,3.02e-16,9;UBERON:0002385,3.02e-16,9;UBERON:0000486,3.02e-16,9;UBERON:0007503,3.02e-16,9;UBERON:0001015,3.02e-16,9;UBERON:0002329,3.02e-16,9;UBERON:0003082,3.02e-16,9;UBERON:0003059,3.02e-16,9;UBERON:0007282,3.02e-16,9;UBERON:0004290,3.02e-16,9;UBERON:0009618,3.02e-16,9;UBERON:0000383,1.42e-14,10;UBERON:0001135,9.26e-14,3;UBERON:0004237,9.26e-14,3;UBERON:0004695,9.26e-14,3;UBERON:0002111,9.26e-14,3;UBERON:0004178,9.26e-14,3;UBERON:0007524,3.33e-13,11;UBERON:0003077,3.33e-13,11;UBERON:0007285,3.33e-13,11;UBERON:0000947,1.94e-10,4;UBERON:0001637,1.94e-10,4;UBERON:0004573,1.94e-10,4;UBERON:0003509,1.94e-10,4;UBERON:0004571,1.94e-10,4;UBERON:0010191,1.94e-10,4;UBERON:0004572,1.94e-10,4;UBERON:0000055,1.95e-08,5;UBERON:0007500,1.95e-08,5;UBERON:0001981,1.95e-08,5;UBERON:0002049,1.95e-08,5;UBERON:0007798,1.95e-08,5;UBERON:0004537,1.95e-08,5;UBERON:0006965,1.95e-08,5 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.467225281191051,0,0,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0,0.635030673459631,0,0,0,0,0,0,0,0,1.76469446409304,2.04913645487534,0,3.9028013572429,2.43304634926835,2.20256102594018,2.34717403304412,0.218025156380447,0.659058548203415,0.777719596297134,0,0,0,0,0,2.31533492432352,1.14613375975503,1.03134418455488,0,0,0,1.0165335962074,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,1.12552522006336,0.15279824777681,0,0,0.186399445825301,0.530083353332288,0.604572480854284,0.289864488701678,0,2.719885334831,0,0.649776417447669,0.896053774194671,0.561777680527007,1.70430322578058,0.519572009205738,1.7666978725517,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0,0.505524445014783,0.22836775943812,0,0.445326417194474,0,0,0.230615497256059,0.60289056221049,0.470354828542819,0.125666591329675,0.494389935468748,0.578397427679647,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0.305518091550949,0,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0.702213187313235,0.257347907114715,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.864552199498777,0.398282546508734,0.189667900953082,0,0,0.610953983535943,0,0.140271639780637,0.379419222745544,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,0.923765950833023,0.37898282354097,0.325929952884052,0.169745085775188,0.704070744865506,0.167506257441816,0.952174563544055,0.585400943573396,0.788175720530955,1.10732344824387,0.797273843287435,0.327726629431476,0.863424909329478,0.433947175744535,1.50791283939272,0.54390568381871,0,0.551873492609465,0,0,1.80328439914343,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.425820255624806,0.712262414669021,0.325773918707152,0.494910368917606,0,0,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0.214337035031592,0.354680467284547,0.713475270408282,0.493647061806363,0.304464949114599,0.469343416127421,5.08396970073168,0.441056796109924,0.32977250588296,0.645857706783622,0.301564624640779,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0.555583582109135,0.188368457004691,0,0.228778173206523,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0.609958401380546,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.743881101528023,0.26175594198403,0.388844919875379,0,0,0,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,1.35232715822533,1.50145980360946,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.824140228955577,0,0,0,0.188626341386076,0,0.192075457214608,0.287177344778066,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0,0,0.237270036248348,0,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p6@Stat6 | |||
}} |
Revision as of 16:04, 12 September 2013
Short description: | p6@Stat6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Stat6_5end |
Coexpression cluster: | NA |
Association with transcript: | 172bp_to_ENSMUST00000120279_5end |
EntrezGene: | Stat6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.36e-24 | 6 |
muscle cell | 1.36e-24 | 6 |
myoblast | 1.36e-24 | 6 |
mesodermal cell | 5.10e-21 | 7 |
multi-potent skeletal muscle stem cell | 3.02e-16 | 9 |
smooth muscle cell | 9.26e-14 | 3 |
vascular associated smooth muscle cell | 9.26e-14 | 3 |
aortic smooth muscle cell | 9.26e-14 | 3 |
smooth muscle myoblast | 9.26e-14 | 3 |
cardiocyte | 1.70e-12 | 3 |
striated muscle cell | 1.70e-12 | 3 |
cardiac muscle cell | 1.70e-12 | 3 |
cardiac muscle myoblast | 1.70e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.02e-16 | 9 |
striated muscle tissue | 3.02e-16 | 9 |
muscle tissue | 3.02e-16 | 9 |
multilaminar epithelium | 3.02e-16 | 9 |
epithelial vesicle | 3.02e-16 | 9 |
musculature | 3.02e-16 | 9 |
somite | 3.02e-16 | 9 |
myotome | 3.02e-16 | 9 |
presomitic mesoderm | 3.02e-16 | 9 |
presumptive segmental plate | 3.02e-16 | 9 |
dermomyotome | 3.02e-16 | 9 |
trunk paraxial mesoderm | 3.02e-16 | 9 |
musculature of body | 1.42e-14 | 10 |
smooth muscle tissue | 9.26e-14 | 3 |
blood vessel smooth muscle | 9.26e-14 | 3 |
arterial system smooth muscle | 9.26e-14 | 3 |
artery smooth muscle tissue | 9.26e-14 | 3 |
aorta smooth muscle tissue | 9.26e-14 | 3 |
dense mesenchyme tissue | 3.33e-13 | 11 |
paraxial mesoderm | 3.33e-13 | 11 |
presumptive paraxial mesoderm | 3.33e-13 | 11 |
aorta | 1.94e-10 | 4 |
artery | 1.94e-10 | 4 |
systemic artery | 1.94e-10 | 4 |
arterial blood vessel | 1.94e-10 | 4 |
systemic arterial system | 1.94e-10 | 4 |
aortic system | 1.94e-10 | 4 |
arterial system | 1.94e-10 | 4 |
vessel | 1.95e-08 | 5 |
epithelial tube open at both ends | 1.95e-08 | 5 |
blood vessel | 1.95e-08 | 5 |
vasculature | 1.95e-08 | 5 |
vascular system | 1.95e-08 | 5 |
blood vasculature | 1.95e-08 | 5 |
vascular cord | 1.95e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.