FFCP PHASE1:Mm9::chr10:126918746..126918755,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71750|HGNC=|MCL_coexpression_id=106|UniProt=|association_with_transcript=376bp_to_ENSMUST00000164469_5end|description=CAGE_peak_21_at_R3hdm2_5end|id=chr10:126918746..126918755,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,6.68e-24,3;CL:0000359,6.68e-24,3;CL:0002539,6.68e-24,3;CL:0000514,6.68e-24,3;CL:0000680,1.61e-12,6;CL:0000187,1.61e-12,6;CL:0000056,1.61e-12,6;CL:0000222,7.02e-11,7;CL:0000355,1.10e-08,9;CL:0002610,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.68e-24,3;UBERON:0004237,6.68e-24,3;UBERON:0004695,6.68e-24,3;UBERON:0002111,6.68e-24,3;UBERON:0004178,6.68e-24,3;UBERON:0006834,5.15e-19,1;UBERON:0000947,3.19e-18,4;UBERON:0001637,3.19e-18,4;UBERON:0004573,3.19e-18,4;UBERON:0003509,3.19e-18,4;UBERON:0004571,3.19e-18,4;UBERON:0010191,3.19e-18,4;UBERON:0004572,3.19e-18,4;UBERON:0000055,8.36e-15,5;UBERON:0007500,8.36e-15,5;UBERON:0001981,8.36e-15,5;UBERON:0002049,8.36e-15,5;UBERON:0007798,8.36e-15,5;UBERON:0004537,8.36e-15,5;UBERON:0006965,8.36e-15,5;UBERON:0001134,1.10e-08,9;UBERON:0002036,1.10e-08,9;UBERON:0002385,1.10e-08,9;UBERON:0000486,1.10e-08,9;UBERON:0007503,1.10e-08,9;UBERON:0001015,1.10e-08,9;UBERON:0002329,1.10e-08,9;UBERON:0003082,1.10e-08,9;UBERON:0003059,1.10e-08,9;UBERON:0007282,1.10e-08,9;UBERON:0004290,1.10e-08,9;UBERON:0009618,1.10e-08,9;UBERON:0000383,6.49e-08,10;UBERON:0007524,2.79e-07,11;UBERON:0003077,2.79e-07,11;UBERON:0007285,2.79e-07,11;UBERON:0004684,4.77e-07,3;UBERON:0002275,4.77e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0.347648640384553,0,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.26173969138476,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0,0,0,0.169978429993855,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,6.38120416534019,0.915758121336325,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p21@R3hdm2}} | ||
|EntrezGene=71750 | |||
|HGNC= | |||
|MCL_coexpression_id=106 | |||
|UniProt= | |||
|association_with_transcript=376bp_to_ENSMUST00000164469_5end | |||
|description=CAGE_peak_21_at_R3hdm2_5end | |||
|id=chr10:126918746..126918755,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.68e-24,3;CL:0000359,6.68e-24,3;CL:0002539,6.68e-24,3;CL:0000514,6.68e-24,3;CL:0000680,1.61e-12,6;CL:0000187,1.61e-12,6;CL:0000056,1.61e-12,6;CL:0000222,7.02e-11,7;CL:0000355,1.10e-08,9;CL:0002610,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.68e-24,3;UBERON:0004237,6.68e-24,3;UBERON:0004695,6.68e-24,3;UBERON:0002111,6.68e-24,3;UBERON:0004178,6.68e-24,3;UBERON:0006834,5.15e-19,1;UBERON:0000947,3.19e-18,4;UBERON:0001637,3.19e-18,4;UBERON:0004573,3.19e-18,4;UBERON:0003509,3.19e-18,4;UBERON:0004571,3.19e-18,4;UBERON:0010191,3.19e-18,4;UBERON:0004572,3.19e-18,4;UBERON:0000055,8.36e-15,5;UBERON:0007500,8.36e-15,5;UBERON:0001981,8.36e-15,5;UBERON:0002049,8.36e-15,5;UBERON:0007798,8.36e-15,5;UBERON:0004537,8.36e-15,5;UBERON:0006965,8.36e-15,5;UBERON:0001134,1.10e-08,9;UBERON:0002036,1.10e-08,9;UBERON:0002385,1.10e-08,9;UBERON:0000486,1.10e-08,9;UBERON:0007503,1.10e-08,9;UBERON:0001015,1.10e-08,9;UBERON:0002329,1.10e-08,9;UBERON:0003082,1.10e-08,9;UBERON:0003059,1.10e-08,9;UBERON:0007282,1.10e-08,9;UBERON:0004290,1.10e-08,9;UBERON:0009618,1.10e-08,9;UBERON:0000383,6.49e-08,10;UBERON:0007524,2.79e-07,11;UBERON:0003077,2.79e-07,11;UBERON:0007285,2.79e-07,11;UBERON:0004684,4.77e-07,3;UBERON:0002275,4.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0.347648640384553,0,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.26173969138476,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0,0,0,0.169978429993855,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,6.38120416534019,0.915758121336325,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p21@R3hdm2 | |||
}} |
Revision as of 16:03, 12 September 2013
Short description: | p21@R3hdm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_R3hdm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:106 |
Association with transcript: | 376bp_to_ENSMUST00000164469_5end |
EntrezGene: | R3hdm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.68e-24 | 3 |
vascular associated smooth muscle cell | 6.68e-24 | 3 |
aortic smooth muscle cell | 6.68e-24 | 3 |
smooth muscle myoblast | 6.68e-24 | 3 |
muscle precursor cell | 1.61e-12 | 6 |
muscle cell | 1.61e-12 | 6 |
myoblast | 1.61e-12 | 6 |
mesodermal cell | 7.02e-11 | 7 |
multi-potent skeletal muscle stem cell | 1.10e-08 | 9 |
raphe nuclei neuron | 4.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.