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FFCP PHASE1:Mm9::chr10:10869204..10869215,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=268281|HGNC=|UniProt=Q7TPQ3|association_with_transcript=-9bp_to_ENSMUST00000159810_5end|description=CAGE_peak_3_at_Shprh_5end|id=chr10:10869204..10869215,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.61e-11!52;UBERON:0005068!2.61e-11!52;UBERON:0006241!2.61e-11!52;UBERON:0007135!2.61e-11!52;UBERON:0001017!3.78e-11!73;UBERON:0005743!3.78e-11!73;UBERON:0000073!4.29e-11!75;UBERON:0001016!4.29e-11!75;UBERON:0000955!6.02e-11!50;UBERON:0006238!6.02e-11!50;UBERON:0002616!2.19e-10!49;UBERON:0002346!9.54e-10!71;UBERON:0003075!9.54e-10!71;UBERON:0007284!9.54e-10!71;UBERON:0000033!1.93e-09!63;UBERON:0000025!2.11e-08!114;UBERON:0002020!4.42e-08!34;UBERON:0003080!4.78e-08!40;UBERON:0004121!6.42e-08!102;UBERON:0000924!6.42e-08!102;UBERON:0006601!6.42e-08!102;UBERON:0002780!1.27e-07!39;UBERON:0001890!1.27e-07!39;UBERON:0006240!1.27e-07!39;UBERON:0004111!2.14e-07!122;UBERON:0003056!3.58e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-13,54;UBERON:0001049,8.28e-13,52;UBERON:0005068,8.28e-13,52;UBERON:0006241,8.28e-13,52;UBERON:0007135,8.28e-13,52;UBERON:0001017,3.29e-11,73;UBERON:0001016,4.53e-11,75;UBERON:0000955,7.70e-11,47;UBERON:0006238,7.70e-11,47;UBERON:0002346,1.45e-10,64;UBERON:0003075,1.45e-10,64;UBERON:0007284,1.45e-10,64;UBERON:0002616,3.69e-10,46;UBERON:0002020,1.02e-09,34;UBERON:0003080,5.94e-09,40;UBERON:0002780,2.05e-08,39;UBERON:0001890,2.05e-08,39;UBERON:0006240,2.05e-08,39;UBERON:0003528,9.82e-08,29;UBERON:0002791,9.82e-08,29;UBERON:0001893,9.82e-08,29;UBERON:0010371,1.41e-07,73;UBERON:0000025,1.55e-07,114;UBERON:0003056,5.56e-07,49;UBERON:0010314,5.67e-07,92|phase1_expression=0.960893082628764,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0.645616617207881,0.140788722151667,0.936258105287974,0.34243593645101,0.159544317990673,0,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.595303031057488,0.297872853602656,0,0.319984845586813,0,0.57423196411502,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0,2.14024590558481,0.912392380975631,1.83546752161682,0.782391344348039,0.436050312760893,0,0.972149495371417,0.839918529752175,0,0.167782606057736,0,0.336093799142464,0.514518872071894,1.43266719969378,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0,1.24427534770173,0.810035629990144,1.05162480675691,1.42825492201902,1.10434270475807,2.08234358665422,1.53352753629178,0,1.10115880999389,3.06449611404451,1.99688493233117,1.31886287730194,2.01272815925301,2.08365348222704,0.558365998002762,1.68828783009504,1.5279824777681,1.47314292736834,1.56608848879013,1.4911955666024,0.530083353332288,1.13357340160178,0.869593466105033,0.860423876981386,0,0,0.649776417447669,1.34408066129201,0.421333260395256,0.340860645156116,0,1.06001872353102,0.845060518660083,0,5.09610479413291,0,0.216491041011214,0,1.01104889002957,0.11418387971906,0.517875767294343,1.03909497345377,0.346970653532272,2.43572382649713,0.922461989024234,0.60289056221049,0.470354828542819,0.251333182659351,0.741584903203122,1.3013942122792,0,1.13236794963186,0.441683036920787,1.45462575940567,0,2.34224637609238,2.51336048176146,0.766371165625774,0.11981512450592,0.599902730993408,0.381210681219194,1.9472783122627,2.28750301409313,1.88481528169297,2.25971616249959,3.58001640262463,1.45451631191692,2.43361894601636,2.03678727700633,0.497627882440372,0.758168275301024,0.210441855886474,1.43132487258974,0.689706313300419,0.900310649026746,0.60281927134286,0.748401490664606,0.640568601424249,0.374806898238915,1.55222022443409,0.431135985865684,1.32374256117473,0.879755620819744,1.09597866213787,0.834141747676794,1.0447564995665,1.23469281844766,1.39323986772945,0.702213187313235,0.51469581422943,1.13665399758237,0.207125772535502,0.234526059981096,0.180062061461015,0.710234206755631,1.18058539048442,0.462801338662135,0.232533944750408,0.804820204198858,0.934122738937356,0.493679549740441,1.80584210487005,1.05389452409612,0.584799949701329,1.09775057645525,1.34206418760372,2.73376933133365,1.13195073617213,0.330418782983798,0.264450566663544,0.213288250535234,2.09013004674395,1.03093969057675,1.00841762311671,0.889512175379481,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,0.974820435595601,0,0.648414149624083,0.796565093017469,0.379335801906163,1.48523066392647,1.1270773567308,0.407302655690628,1.35766741017338,1.68325967736765,1.58091342810643,0.295220295959204,1.09899109488962,0.740382983530803,0,0.667380422864376,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.648540907100142,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,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|EntrezGene=268281
|HGNC=
|UniProt=Q7TPQ3
|association_with_transcript=-9bp_to_ENSMUST00000159810_5end
|description=CAGE_peak_3_at_Shprh_5end
|id=chr10:10869204..10869215,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-13,54;UBERON:0001049,8.28e-13,52;UBERON:0005068,8.28e-13,52;UBERON:0006241,8.28e-13,52;UBERON:0007135,8.28e-13,52;UBERON:0001017,3.29e-11,73;UBERON:0001016,4.53e-11,75;UBERON:0000955,7.70e-11,47;UBERON:0006238,7.70e-11,47;UBERON:0002346,1.45e-10,64;UBERON:0003075,1.45e-10,64;UBERON:0007284,1.45e-10,64;UBERON:0002616,3.69e-10,46;UBERON:0002020,1.02e-09,34;UBERON:0003080,5.94e-09,40;UBERON:0002780,2.05e-08,39;UBERON:0001890,2.05e-08,39;UBERON:0006240,2.05e-08,39;UBERON:0003528,9.82e-08,29;UBERON:0002791,9.82e-08,29;UBERON:0001893,9.82e-08,29;UBERON:0010371,1.41e-07,73;UBERON:0000025,1.55e-07,114;UBERON:0003056,5.56e-07,49;UBERON:0010314,5.67e-07,92
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0.645616617207881,0.140788722151667,0.936258105287974,0.34243593645101,0.159544317990673,0,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.595303031057488,0.297872853602656,0,0.319984845586813,0,0.57423196411502,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0,2.14024590558481,0.912392380975631,1.83546752161682,0.782391344348039,0.436050312760893,0,0.972149495371417,0.839918529752175,0,0.167782606057736,0,0.336093799142464,0.514518872071894,1.43266719969378,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0,1.24427534770173,0.810035629990144,1.05162480675691,1.42825492201902,1.10434270475807,2.08234358665422,1.53352753629178,0,1.10115880999389,3.06449611404451,1.99688493233117,1.31886287730194,2.01272815925301,2.08365348222704,0.558365998002762,1.68828783009504,1.5279824777681,1.47314292736834,1.56608848879013,1.4911955666024,0.530083353332288,1.13357340160178,0.869593466105033,0.860423876981386,0,0,0.649776417447669,1.34408066129201,0.421333260395256,0.340860645156116,0,1.06001872353102,0.845060518660083,0,5.09610479413291,0,0.216491041011214,0,1.01104889002957,0.11418387971906,0.517875767294343,1.03909497345377,0.346970653532272,2.43572382649713,0.922461989024234,0.60289056221049,0.470354828542819,0.251333182659351,0.741584903203122,1.3013942122792,0,1.13236794963186,0.441683036920787,1.45462575940567,0,2.34224637609238,2.51336048176146,0.766371165625774,0.11981512450592,0.599902730993408,0.381210681219194,1.9472783122627,2.28750301409313,1.88481528169297,2.25971616249959,3.58001640262463,1.45451631191692,2.43361894601636,2.03678727700633,0.497627882440372,0.758168275301024,0.210441855886474,1.43132487258974,0.689706313300419,0.900310649026746,0.60281927134286,0.748401490664606,0.640568601424249,0.374806898238915,1.55222022443409,0.431135985865684,1.32374256117473,0.879755620819744,1.09597866213787,0.834141747676794,1.0447564995665,1.23469281844766,1.39323986772945,0.702213187313235,0.51469581422943,1.13665399758237,0.207125772535502,0.234526059981096,0.180062061461015,0.710234206755631,1.18058539048442,0.462801338662135,0.232533944750408,0.804820204198858,0.934122738937356,0.493679549740441,1.80584210487005,1.05389452409612,0.584799949701329,1.09775057645525,1.34206418760372,2.73376933133365,1.13195073617213,0.330418782983798,0.264450566663544,0.213288250535234,2.09013004674395,1.03093969057675,1.00841762311671,0.889512175379481,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,0.974820435595601,0,0.648414149624083,0.796565093017469,0.379335801906163,1.48523066392647,1.1270773567308,0.407302655690628,1.35766741017338,1.68325967736765,1.58091342810643,0.295220295959204,1.09899109488962,0.740382983530803,0,0.667380422864376,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.648540907100142,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.964887042726734,1.29327233116623,0.757965647081939,1.14075483509418,1.18821560042632,1.17345124144251,1.34005005953453,0.714130922658041,0.975668239288994,2.52216230569906,1.32878813789265,1.11618338060241,2.29408640602033,1.55416483679306,1.15719246865209,0,0,0,0.551873492609465,1.28440471990234,1.99259867206745,0.491804836130026,0.757412781613119,0.631016438832513,1.17131623288992,1.07711698866399,1.19484398976276,1.33679204449436,1.41538265394416,0.809621403349789,0.876767573733936,0.790575555893047,2.89189184779626,1.27746076687442,0.890328018336276,1.62886959353576,0.989820737835213,0,0.485561272309963,0.302323556964751,0.754420319023592,0.885905678642318,0.922305443831782,1.29214146584111,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0.340439605753788,0.540183282093931,1.16422815404479,0.643011105094777,1.77340233642274,2.14042581122485,1.15184314421485,0.913394847343798,1.40803024838226,1.69465656691056,0.441056796109924,0.32977250588296,0.322928853391811,0.663442174209714,0.596861720015682,0.492422699235184,0.582961673259701,2.03967832211561,0.341741761595705,1.65109494370578,0.370389054739423,0.188368457004691,0.136694227721025,0,0.169978429993855,1.25956307091292,0.276399947608848,0,0.474503990371703,1.01659733563424,0.756037385752609,1.25452977608681,1.52853794622324,0.269728692769641,0.909188012978695,0.523511883968059,0.518459893167171,0.621339313086926,0,1.04661582230785,1.32366792365678,1.16670713006429,1.03327858782185,1.520605129417,1.76035857968631,1.0416350787516,1.99232754408851,0.483168241652012,0.576060012515731,0,1.01362607645082,0.513554785824136,1.29920822977795,0,0.198681354781265,0.360586348559907,0.295379054349154,0.302899349844443,0.533447646584999,0.201652370273681,0.292373642219257,0.384847366561318,0.350630706544707,0.453460767230423,2.44184548711471,1.70456327558004,2.51826924546118,0.772758376128762,0.187682475451182,1.28206136987086,0.428736758158132,0,3.3885110557024,3.22227665555024,6.87474616127276,1.20297227640581,0,6.7985450765073,0.675022500231806,1.35096360967266,0.906284817968409,2.5888015587591,0.726511433089237,0.798049746802062,1.02440163452481,1.94485373654635,0.628839487883947,0.551530525350042,0.44449345560323,0.618105171716683,0.962757628775446,2.02157769411038,1.01391719956096,1.13175804831646,1.03005658216871,1.02440243847791,0.861532034334199,1.42888107384922,0.579421629724277,0.964546102318525,0.824171801606613,1.17759136107518,0.342869252385415,1.24233064311536,1.43061713968393,1.0174249164263,1.2234219453993,1.09998990259179,2.19513567447327,0.526139422875686,1.7654534799962,1.68342681497322,0.949080144993393,1.18205378850676,0.409231043169689,0.77468420592983,0.578719832943424,1.99848462350357,0.701794825336225,0.859484216193193,0,0.441182838239031,1.15933917810211
|short_description=p3@Shprh
}}

Revision as of 15:41, 12 September 2013

Short description:p3@Shprh
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Shprh_5end
Coexpression cluster:NA
Association with transcript: -9bp_to_ENSMUST00000159810_5end
EntrezGene:Shprh
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Shprh

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.58
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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