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FFCP PHASE1:Mm9::chr10:10869185..10869198,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=268281|HGNC=|UniProt=Q7TPQ3|association_with_transcript=-26bp_to_ENSMUST00000159810_5end|description=CAGE_peak_2_at_Shprh_5end|id=chr10:10869185..10869198,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.48e-13!50;UBERON:0006238!1.48e-13!50;UBERON:0000033!4.49e-13!63;UBERON:0002616!5.46e-13!49;UBERON:0002346!1.91e-12!71;UBERON:0003075!1.91e-12!71;UBERON:0007284!1.91e-12!71;UBERON:0001049!3.11e-12!52;UBERON:0005068!3.11e-12!52;UBERON:0006241!3.11e-12!52;UBERON:0007135!3.11e-12!52;UBERON:0003056!2.02e-10!49;UBERON:0003080!4.95e-10!40;UBERON:0002780!7.14e-10!39;UBERON:0001890!7.14e-10!39;UBERON:0006240!7.14e-10!39;UBERON:0001017!9.01e-10!73;UBERON:0005743!9.01e-10!73;UBERON:0000073!1.30e-09!75;UBERON:0001016!1.30e-09!75;UBERON:0002020!1.36e-09!34;UBERON:0000025!3.39e-09!114;UBERON:0004121!3.67e-09!102;UBERON:0000924!3.67e-09!102;UBERON:0006601!3.67e-09!102;UBERON:0002791!6.97e-09!29;UBERON:0003528!6.97e-09!29;UBERON:0001893!6.97e-09!29;UBERON:0004111!2.06e-08!122;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10;UBERON:0000956!4.45e-07!21;UBERON:0001869!4.45e-07!21;UBERON:0000203!4.45e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.20e-13,54;UBERON:0000955,2.22e-11,47;UBERON:0006238,2.22e-11,47;UBERON:0001049,4.10e-11,52;UBERON:0005068,4.10e-11,52;UBERON:0006241,4.10e-11,52;UBERON:0007135,4.10e-11,52;UBERON:0002346,4.71e-11,64;UBERON:0003075,4.71e-11,64;UBERON:0007284,4.71e-11,64;UBERON:0002616,9.28e-11,46;UBERON:0003056,5.26e-10,49;UBERON:0010314,7.35e-10,92;UBERON:0003080,7.57e-10,40;UBERON:0002780,1.20e-09,39;UBERON:0001890,1.20e-09,39;UBERON:0006240,1.20e-09,39;UBERON:0002021,3.48e-09,10;UBERON:0000411,3.48e-09,10;UBERON:0001950,3.48e-09,10;UBERON:0010371,6.85e-09,73;UBERON:0002020,1.18e-08,34;UBERON:0003528,1.22e-08,29;UBERON:0002791,1.22e-08,29;UBERON:0001893,1.22e-08,29;UBERON:0001017,1.31e-08,73;UBERON:0001016,2.37e-08,75;UBERON:0000025,1.19e-07,114;UBERON:0004121,5.93e-07,95;UBERON:0000924,5.93e-07,95;UBERON:0006601,5.93e-07,95;UBERON:0000956,7.56e-07,21;UBERON:0001869,7.56e-07,21;UBERON:0000203,7.56e-07,21|phase1_expression=1.28119077683835,0,0.454999239389536,0,0,0.16787927191189,0,0.258246646883153,0.281577444303333,0.70219357896598,0.171217968225505,0.319088635981346,0.171200729931206,0.174840804837995,0,0,0,0.630924330716475,0.137114433605739,0.42438965179803,1.02051948181284,0.297872853602656,0.522399578277871,0,0,0,0.430761996159075,0,0,0.252030129759931,0.221730510655305,1.27006134691926,0,0,0,0,0,1.25559489221072,0,0,1.17646297606203,0.683045484958446,0,1.51076181570693,1.62203089951223,0.550640256485045,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,2.0057340795713,1.03134418455488,0.202316460859598,0.528990979272033,1.26766280701236,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.14058573539325,0.675029691658453,1.89292465216244,1.42825492201902,0.883474163806454,0.979926393719632,0.958454710182364,2.75765635983006,3.30347642998166,4.59674417106676,3.07213066512487,1.97829431595291,1.18933936683133,1.56274011167028,1.3959149950069,1.12552522006336,3.20876320331301,1.76777151284201,2.27794689278565,0.931997229126503,0.605809546665472,1.058001841495,2.02905142091174,1.72084775396277,0,0.539703191637817,0,0,0.702222100658759,0.511290967734173,0.519572009205738,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,1.03575153458869,0.593768556259299,0.693941307064543,1.52232739156071,0.691846491768175,1.20578112442098,1.41106448562846,0.879666139307728,1.48316980640624,1.59059292611903,0.884610551949874,1.13236794963186,0.220841518460394,0,0,6.73395833126558,8.58731497935166,1.53274233125155,0.718890747035522,0,0.635351135365324,1.3481157546434,4.11750542536764,0.879580464790051,2.25971616249959,3.58001640262463,2.49345653471472,2.75810147215188,2.44414473240759,0.995255764880744,0.252722758433675,0.420883711772948,1.56144531555244,0.689706313300419,1.98068342785884,1.20563854268572,1.49680298132921,1.15302348256365,0.655912071918102,1.81092359517311,0,1.89106080167819,1.75951124163949,1.7535658594206,1.66828349535359,0.348252166522167,1.02891068203972,2.58744546864041,0.702213187313235,0.51469581422943,1.13665399758237,0.828503090142008,0.469052119962192,0,1.42046841351126,0.590292695242212,1.3884040159864,2.32533944750408,1.07309360559848,0.817357396570186,0.987359099480883,1.31333971263276,1.86458261955468,3.07019973593198,0.878200461164203,2.01309628140558,1.26173969138476,1.9551876352064,0,0,0.426576501070468,2.55460339046482,1.54640953586512,1.00841762311671,0.667134131534611,0.951128130562796,0,0.658795818896044,0.754005626400808,1.1937388322469,0.779856348476481,0,0.432276099749388,0,0.569003702859245,1.48523066392647,1.1270773567308,1.83286195060783,1.93952487167626,2.314482056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|EntrezGene=268281
|HGNC=
|UniProt=Q7TPQ3
|association_with_transcript=-26bp_to_ENSMUST00000159810_5end
|description=CAGE_peak_2_at_Shprh_5end
|id=chr10:10869185..10869198,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.48e-13!50;UBERON:0006238!1.48e-13!50;UBERON:0000033!4.49e-13!63;UBERON:0002616!5.46e-13!49;UBERON:0002346!1.91e-12!71;UBERON:0003075!1.91e-12!71;UBERON:0007284!1.91e-12!71;UBERON:0001049!3.11e-12!52;UBERON:0005068!3.11e-12!52;UBERON:0006241!3.11e-12!52;UBERON:0007135!3.11e-12!52;UBERON:0003056!2.02e-10!49;UBERON:0003080!4.95e-10!40;UBERON:0002780!7.14e-10!39;UBERON:0001890!7.14e-10!39;UBERON:0006240!7.14e-10!39;UBERON:0001017!9.01e-10!73;UBERON:0005743!9.01e-10!73;UBERON:0000073!1.30e-09!75;UBERON:0001016!1.30e-09!75;UBERON:0002020!1.36e-09!34;UBERON:0000025!3.39e-09!114;UBERON:0004121!3.67e-09!102;UBERON:0000924!3.67e-09!102;UBERON:0006601!3.67e-09!102;UBERON:0002791!6.97e-09!29;UBERON:0003528!6.97e-09!29;UBERON:0001893!6.97e-09!29;UBERON:0004111!2.06e-08!122;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10;UBERON:0000956!4.45e-07!21;UBERON:0001869!4.45e-07!21;UBERON:0000203!4.45e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.20e-13,54;UBERON:0000955,2.22e-11,47;UBERON:0006238,2.22e-11,47;UBERON:0001049,4.10e-11,52;UBERON:0005068,4.10e-11,52;UBERON:0006241,4.10e-11,52;UBERON:0007135,4.10e-11,52;UBERON:0002346,4.71e-11,64;UBERON:0003075,4.71e-11,64;UBERON:0007284,4.71e-11,64;UBERON:0002616,9.28e-11,46;UBERON:0003056,5.26e-10,49;UBERON:0010314,7.35e-10,92;UBERON:0003080,7.57e-10,40;UBERON:0002780,1.20e-09,39;UBERON:0001890,1.20e-09,39;UBERON:0006240,1.20e-09,39;UBERON:0002021,3.48e-09,10;UBERON:0000411,3.48e-09,10;UBERON:0001950,3.48e-09,10;UBERON:0010371,6.85e-09,73;UBERON:0002020,1.18e-08,34;UBERON:0003528,1.22e-08,29;UBERON:0002791,1.22e-08,29;UBERON:0001893,1.22e-08,29;UBERON:0001017,1.31e-08,73;UBERON:0001016,2.37e-08,75;UBERON:0000025,1.19e-07,114;UBERON:0004121,5.93e-07,95;UBERON:0000924,5.93e-07,95;UBERON:0006601,5.93e-07,95;UBERON:0000956,7.56e-07,21;UBERON:0001869,7.56e-07,21;UBERON:0000203,7.56e-07,21
|phase1_expression=1.28119077683835,0,0.454999239389536,0,0,0.16787927191189,0,0.258246646883153,0.281577444303333,0.70219357896598,0.171217968225505,0.319088635981346,0.171200729931206,0.174840804837995,0,0,0,0.630924330716475,0.137114433605739,0.42438965179803,1.02051948181284,0.297872853602656,0.522399578277871,0,0,0,0.430761996159075,0,0,0.252030129759931,0.221730510655305,1.27006134691926,0,0,0,0,0,1.25559489221072,0,0,1.17646297606203,0.683045484958446,0,1.51076181570693,1.62203089951223,0.550640256485045,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,2.0057340795713,1.03134418455488,0.202316460859598,0.528990979272033,1.26766280701236,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.14058573539325,0.675029691658453,1.89292465216244,1.42825492201902,0.883474163806454,0.979926393719632,0.958454710182364,2.75765635983006,3.30347642998166,4.59674417106676,3.07213066512487,1.97829431595291,1.18933936683133,1.56274011167028,1.3959149950069,1.12552522006336,3.20876320331301,1.76777151284201,2.27794689278565,0.931997229126503,0.605809546665472,1.058001841495,2.02905142091174,1.72084775396277,0,0.539703191637817,0,0,0.702222100658759,0.511290967734173,0.519572009205738,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,1.03575153458869,0.593768556259299,0.693941307064543,1.52232739156071,0.691846491768175,1.20578112442098,1.41106448562846,0.879666139307728,1.48316980640624,1.59059292611903,0.884610551949874,1.13236794963186,0.220841518460394,0,0,6.73395833126558,8.58731497935166,1.53274233125155,0.718890747035522,0,0.635351135365324,1.3481157546434,4.11750542536764,0.879580464790051,2.25971616249959,3.58001640262463,2.49345653471472,2.75810147215188,2.44414473240759,0.995255764880744,0.252722758433675,0.420883711772948,1.56144531555244,0.689706313300419,1.98068342785884,1.20563854268572,1.49680298132921,1.15302348256365,0.655912071918102,1.81092359517311,0,1.89106080167819,1.75951124163949,1.7535658594206,1.66828349535359,0.348252166522167,1.02891068203972,2.58744546864041,0.702213187313235,0.51469581422943,1.13665399758237,0.828503090142008,0.469052119962192,0,1.42046841351126,0.590292695242212,1.3884040159864,2.32533944750408,1.07309360559848,0.817357396570186,0.987359099480883,1.31333971263276,1.86458261955468,3.07019973593198,0.878200461164203,2.01309628140558,1.26173969138476,1.9551876352064,0,0,0.426576501070468,2.55460339046482,1.54640953586512,1.00841762311671,0.667134131534611,0.951128130562796,0,0.658795818896044,0.754005626400808,1.1937388322469,0.779856348476481,0,0.432276099749388,0,0.569003702859245,1.48523066392647,1.1270773567308,1.83286195060783,1.93952487167626,2.31448205638051,1.45444035385792,0.738050739898011,0.31399745568275,0.863780147452604,0.296452627087149,0.667380422864376,0.196558995113203,0.899448449539415,0.202860121388503,1.20588579876208,0.25462585178142,0.575392274901621,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0.947457058852424,2.11854469374634,2.20668611507745,1.40814148973101,0.670025029767263,0.952174563544055,0.780534591431195,2.83743259391144,2.43611158613652,1.2756381492599,0.327726629431476,1.55416483679306,1.59113964439663,0,0,0.491764273019036,0,1.12385412991454,2.34423373184406,0.491804836130026,0.757412781613119,0.315508219416257,2.34263246577983,0.861693590931196,0.477937595905104,0.222798674082394,0.566153061577665,0.809621403349789,0.584511715822624,0.790575555893047,2.89189184779626,1.13552068166615,0.890328018336276,1.95464351224291,2.47455184458803,0,0.728341908464944,0.302323556964751,1.13163047853539,0.295301892880773,0.307435147943927,2.06742634534577,0.363533729477506,1.06949213515416,0.316036757935816,0,0,0.340439605753788,1.44048875225048,0.646793418913773,1.28602221018955,1.24138163549592,1.96205699362278,2.30368628842969,0.608929898229199,0.704015124191131,1.48282449604674,0.441056796109924,0.65954501176592,1.61464426695906,0.904693873922338,0.358117032009409,0.820704498725306,0.582961673259701,1.29797711407357,0.170870880797853,0.82554747185289,0.555583582109135,0.565105371014073,0.27338845544205,0.457556346413045,0.509935289981566,0.69975726161829,0.276399947608848,0,1.10717597753397,1.01659733563424,1.40406943068342,0.836353184057875,1.74690050996942,1.07891477107857,0.826534557253359,1.83229159388821,0.388844919875379,0.621339313086926,0,2.24274819065968,1.48912641411388,1.55560950675238,1.6790777052105,2.53434188236167,3.52071715937262,1.69265700297135,1.67774951081137,0.724752362478018,0.288030006257865,0.632022241256357,0.608175645870493,1.1298205288131,1.16928740680016,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.504832249740738,0.228620419965,0.302478555410522,0.194915761479505,0.384847366561318,0.233753804363138,0.680191150845634,1.55390167361845,1.61484941897056,1.17519231454855,0.579568782096571,0.563047426353546,1.28206136987086,1.07184189539533,0.501572104035363,3.95326289831947,2.76195141904306,4.58316410751517,3.78077001156113,3.42541259885321,2.2661816921691,2.70009000092722,4.05289082901798,3.62513927187364,4.65984280576638,0.62272408550506,2.39414924040619,1.02440163452481,0.486213434136588,0.628839487883947,0.551530525350042,1.11123363900808,1.03017528619447,1.60459604795908,1.51618327058278,2.02783439912192,1.69763707247469,1.49826411951812,0.960377286073039,1.14870937911227,0.476293691283074,1.97003354106254,0.964546102318525,2.06042950401653,1.17759136107518,0.342869252385415,1.24233064311536,0.953744759789284,1.30811774969096,0.846984423737976,1.18460451048347,2.0122077016005,0.789209134313529,1.62964936615034,0.561142271657738,1.42362021749009,0.886540341380071,0.818462086339379,2.16911577660352,1.15743966588685,0.499621155875892,0.935726433781634,0.644613162144895,1.53030665655075,1.76473135295612,2.08681052058379
|short_description=p2@Shprh
}}

Revision as of 15:41, 12 September 2013

Short description:p2@Shprh
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shprh_5end
Coexpression cluster:NA
Association with transcript: -26bp_to_ENSMUST00000159810_5end
EntrezGene:Shprh
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shprh

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.20e-1354
brain2.22e-1147
future brain2.22e-1147
neural tube4.10e-1152
neural rod4.10e-1152
future spinal cord4.10e-1152
neural keel4.10e-1152
neurectoderm4.71e-1164
neural plate4.71e-1164
presumptive neural plate4.71e-1164
regional part of brain9.28e-1146
pre-chordal neural plate5.26e-1049
structure with developmental contribution from neural crest7.35e-1092
anterior neural tube7.57e-1040
regional part of forebrain1.20e-0939
forebrain1.20e-0939
future forebrain1.20e-0939
occipital lobe3.48e-0910
visual cortex3.48e-0910
neocortex3.48e-0910
ecto-epithelium6.85e-0973
gray matter1.18e-0834
brain grey matter1.22e-0829
regional part of telencephalon1.22e-0829
telencephalon1.22e-0829
central nervous system1.31e-0873
nervous system2.37e-0875
tube1.19e-07114
ectoderm-derived structure5.93e-0795
ectoderm5.93e-0795
presumptive ectoderm5.93e-0795
cerebral cortex7.56e-0721
cerebral hemisphere7.56e-0721
pallium7.56e-0721







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