FFCP PHASE1:Hg19::chr2:173600040..173600056,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11069|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16626|TSSclassifier=S|UniProt=|association_with_transcript=38bp_to_ENST00000484331_5end|coexpression_cluster_id=C118|description=CAGE_peak_20_at_RAPGEF4_5end|id=chr2:173600040..173600056,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.84e-30;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;2.93e-23;1!DOID:1357;2.93e-23;1|ontology_enrichment_disease_v019_2=DOID:0050619,6.40e-23,1;DOID:1357,6.40e-23,1|ontology_enrichment_uberon=UBERON:0001049!2.25e-78!57;UBERON:0005068!2.25e-78!57;UBERON:0006241!2.25e-78!57;UBERON:0007135!2.25e-78!57;UBERON:0002616!1.41e-71!59;UBERON:0001017!2.66e-62!82;UBERON:0000955!2.91e-62!69;UBERON:0006238!2.91e-62!69;UBERON:0002780!1.77e-60!41;UBERON:0001890!1.77e-60!41;UBERON:0006240!1.77e-60!41;UBERON:0005743!5.99e-59!86;UBERON:0003080!7.12e-59!42;UBERON:0000073!4.25e-55!94;UBERON:0001016!4.25e-55!94;UBERON:0001893!1.17e-54!34;UBERON:0002020!1.61e-54!34;UBERON:0003528!1.61e-54!34;UBERON:0003075!5.75e-54!86;UBERON:0007284!5.75e-54!86;UBERON:0002791!6.76e-52!33;UBERON:0002346!4.16e-51!90;UBERON:0001869!1.04e-49!32;UBERON:0002619!1.04e-45!22;UBERON:0007023!2.16e-42!115;UBERON:0001950!3.70e-40!20;UBERON:0000956!8.00e-40!25;UBERON:0000203!8.00e-40!25;UBERON:0003056!2.98e-38!61;UBERON:0000033!1.61e-36!123;UBERON:0000153!4.01e-36!129;UBERON:0007811!4.01e-36!129;UBERON:0004121!6.21e-29!169;UBERON:0000924!5.23e-28!173;UBERON:0006601!5.23e-28!173;UBERON:0001871!2.56e-25!7;UBERON:0004733!1.46e-20!12;UBERON:0002028!1.46e-20!12;UBERON:0007277!1.46e-20!12;UBERON:0003076!1.30e-19!15;UBERON:0003057!1.30e-19!15;UBERON:0004732!7.78e-19!13;UBERON:0002298!2.47e-18!8;UBERON:0000025!3.29e-18!194;UBERON:0002420!2.61e-16!9;UBERON:0007245!2.61e-16!9;UBERON:0010009!2.61e-16!9;UBERON:0010011!2.61e-16!9;UBERON:0000454!2.61e-16!9;UBERON:0000349!2.76e-16!5;UBERON:0002308!7.45e-16!9;UBERON:0000125!7.45e-16!9;UBERON:0000200!1.45e-13!6;UBERON:0004111!1.68e-13!241;UBERON:0003296!3.42e-13!4;UBERON:0010133!3.42e-13!4;UBERON:0002680!8.77e-13!9;UBERON:0001895!8.77e-13!9;UBERON:0010092!8.77e-13!9;UBERON:0000483!1.86e-12!309;UBERON:0000119!3.16e-12!312;UBERON:0000477!3.27e-11!286;UBERON:0000064!4.50e-11!219;UBERON:0009663!7.56e-11!7;UBERON:0002771!1.79e-10!3;UBERON:0000988!3.14e-10!3;UBERON:0001896!3.35e-10!3;UBERON:0005290!3.35e-10!3;UBERON:0010096!3.35e-10!3;UBERON:0002021!7.67e-10!5;UBERON:0006331!1.74e-09!3;UBERON:0000475!2.20e-09!365;UBERON:0000369!5.27e-08!4;UBERON:0002435!5.27e-08!4;UBERON:0000204!5.27e-08!4;UBERON:0010082!5.27e-08!4;UBERON:0000481!6.71e-08!347;UBERON:0001905!9.28e-08!2;UBERON:0002757!9.28e-08!2;UBERON:0010134!9.28e-08!2;UBERON:0002784!9.28e-08!2;UBERON:0005408!9.28e-08!2;UBERON:0001899!9.28e-08!2;UBERON:0001876!1.13e-07!2;UBERON:0001894!1.57e-07!7;UBERON:0006222!1.57e-07!7;UBERON:0001954!2.42e-07!2;UBERON:0003022!2.42e-07!2;UBERON:0002421!2.42e-07!2;UBERON:0002600!2.42e-07!2;UBERON:0000062!2.99e-07!511;UBERON:0000007!4.11e-07!2;UBERON:0002148!4.65e-07!2;UBERON:0009662!4.65e-07!2|ontology_enrichment_uberon_v019=UBERON:0001874;2.93e-23;1!UBERON:0001764;2.93e-23;1!UBERON:0001825;2.93e-23;1!UBERON:0002680;9.34e-23;9!UBERON:0001895;9.34e-23;9!UBERON:0004733;2.91e-17;12!UBERON:0002028;2.91e-17;12!UBERON:0004732;5.42e-16;13!UBERON:0002037;8.71e-16;6!UBERON:0001871;1.49e-13;6!UBERON:0000073;1.38e-12;53!UBERON:0002616;1.38e-12;53!UBERON:0001905;2.45e-12;2!UBERON:0002757;2.45e-12;2!UBERON:0010134;2.45e-12;2!UBERON:0005408;2.45e-12;2!UBERON:0001899;2.45e-12;2!UBERON:0003528;3.67e-11;34!UBERON:0002791;3.67e-11;32!UBERON:0002020;3.67e-11;34!UBERON:0001869;3.49e-10;32!UBERON:0001893;3.49e-10;34!UBERON:0001950;4.24e-10;20!UBERON:0002780;2.75e-09;41!UBERON:0001890;2.75e-09;41!UBERON:0002619;2.82e-09;22!UBERON:0000988;1.17e-08;3!UBERON:0001870;1.17e-08;3!UBERON:0005383;1.17e-08;3!UBERON:0005382;1.17e-08;3!UBERON:0001017;2.47e-08;75!UBERON:0000956;2.82e-08;25!UBERON:0000203;2.82e-08;25!UBERON:0000955;5.64e-08;68!UBERON:0001016;1.21e-07;83!UBERON:0000369;8.37e-07;4!UBERON:0002435;8.37e-07;4!UBERON:0003296;8.37e-07;4!UBERON:0010133;8.37e-07;4!UBERON:0002784;8.37e-07;4!UBERON:0000204;8.37e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.64e-26,53;UBERON:0002616,6.64e-26,53;UBERON:0001049,1.54e-24,56;UBERON:0005068,1.54e-24,56;UBERON:0006241,1.54e-24,56;UBERON:0007135,1.54e-24,56;UBERON:0001874,2.62e-23,1;UBERON:0001764,6.40e-23,1;UBERON:0001825,6.40e-23,1;UBERON:0002680,6.95e-23,9;UBERON:0001895,6.95e-23,9;UBERON:0010092,6.95e-23,9;UBERON:0000955,5.71e-20,68;UBERON:0006238,5.71e-20,68;UBERON:0004733,2.33e-17,12;UBERON:0002028,2.33e-17,12;UBERON:0007277,2.33e-17,12;UBERON:0001017,7.98e-17,81;UBERON:0003075,7.98e-17,82;UBERON:0007284,7.98e-17,82;UBERON:0004732,4.42e-16,13;UBERON:0002346,4.81e-16,86;UBERON:0002037,7.79e-16,6;UBERON:0006215,7.79e-16,6;UBERON:000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16626 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENST00000484331_5end | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_20_at_RAPGEF4_5end | |||
|id=chr2:173600040..173600056,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.84e-30;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.93e-23;1!DOID:1357;2.93e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.40e-23,1;DOID:1357,6.40e-23,1 | |||
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|short_description=p20@RAPGEF4 | |||
}} |
Revision as of 14:42, 12 September 2013
Short description: | p20@RAPGEF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_RAPGEF4_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 38bp_to_ENST00000484331_5end |
EntrezGene: | RAPGEF4 |
HGNC: | 16626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.40e-23 | 1 |
maxillary sinus cancer | 6.40e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.