FFCP PHASE1:Hg19::chr2:171911636..171911640,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9874|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11841|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000478683,uc002ugr.1_5end|description=CAGE_peak_18_at_TLK1_5end|id=chr2:171911636..171911640,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0000197;6.55e-08;6!CL:0000098;6.55e-08;6!CL:0002167;6.55e-08;6!CL:0000075;7.24e-07;27|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4;CL:0000197,6.34e-08,6;CL:0000098,6.34e-08,6;CL:0002167,6.34e-08,6;CL:0000075,7.24e-07,27|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002771;3.11e-21;2!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0001872;3.10e-09;5!UBERON:0001950;1.34e-08;20!UBERON:0000200;5.54e-08;6!UBERON:0002619;6.19e-08;22!UBERON:0000956;3.96e-07;25!UBERON:0000203;3.96e-07;25!UBERON:0001871;5.08e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.11e-21,2;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0001872,3.49e-09,5;UBERON:0001950,1.42e-08,20;UBERON:0000200,5.54e-08,6;UBERON:0002619,6.52e-08,22;UBERON:0000956,4.15e-07,25;UBERON:0000203,4.15e-07,25;UBERON:0001871,5.08e-07,6|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0,0,0,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0.167186495390678,0.32592226663359,0,0,0,0,0.664601683750863,0.541607727530031,0.128091319725675,0.520237390239513,0.328875809207352,0.276350017785848,0,0.14828656316206,0.535081656179426,0,0,0.766440987203842,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0,0.482022059766964,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0,0,1.24782516918484,0.713715955188647,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0.355123450626254,0,0.519254429183621,0.116210378459959,0.362578348774867,0,0.368323955743585,0,0.182091168006717,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0.308097234229289,0,0.137836572484531,0,0.290033387828457,0,0,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.557409525377156,0.28853842595289,0.213425530045242,0,0,0.191505370132367,0.635020748171649,0.324621940274555,0,0,0.156679895773023,0,0,0,0.80719882876419,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11841 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000478683,uc002ugr.1_5end | |||
|description=CAGE_peak_18_at_TLK1_5end | |||
|id=chr2:171911636..171911640,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0000197;6.55e-08;6!CL:0000098;6.55e-08;6!CL:0002167;6.55e-08;6!CL:0000075;7.24e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4;CL:0000197,6.34e-08,6;CL:0000098,6.34e-08,6;CL:0002167,6.34e-08,6;CL:0000075,7.24e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.11e-21;2!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0001872;3.10e-09;5!UBERON:0001950;1.34e-08;20!UBERON:0000200;5.54e-08;6!UBERON:0002619;6.19e-08;22!UBERON:0000956;3.96e-07;25!UBERON:0000203;3.96e-07;25!UBERON:0001871;5.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.11e-21,2;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0001872,3.49e-09,5;UBERON:0001950,1.42e-08,20;UBERON:0000200,5.54e-08,6;UBERON:0002619,6.52e-08,22;UBERON:0000956,4.15e-07,25;UBERON:0000203,4.15e-07,25;UBERON:0001871,5.08e-07,6 | |||
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| |||
|short_description=p18@TLK1 | |||
}} |
Revision as of 14:39, 12 September 2013
Short description: | p18@TLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_TLK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000478683, uc002ugr.1_5end |
EntrezGene: | TLK1 |
HGNC: | 11841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |
receptor cell | 6.34e-08 | 6 |
sensory epithelial cell | 6.34e-08 | 6 |
olfactory epithelial cell | 6.34e-08 | 6 |
columnar/cuboidal epithelial cell | 7.24e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.11e-21 | 2 |
cuboidal epithelium | 3.42e-11 | 4 |
transparent eye structure | 3.42e-11 | 4 |
simple cuboidal epithelium | 3.42e-11 | 4 |
cranial placode | 3.42e-11 | 4 |
lens of camera-type eye | 3.42e-11 | 4 |
epithelium of lens | 3.42e-11 | 4 |
lens placode | 3.42e-11 | 4 |
lens vesicle | 3.42e-11 | 4 |
parietal lobe | 3.49e-09 | 5 |
neocortex | 1.42e-08 | 20 |
gyrus | 5.54e-08 | 6 |
regional part of cerebral cortex | 6.52e-08 | 22 |
cerebral cortex | 4.15e-07 | 25 |
pallium | 4.15e-07 | 25 |
temporal lobe | 5.08e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.