FFCP PHASE1:Hg19::chr2:135011615..135011625,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4249|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7049|TSSclassifier=N|UniProt=Q09328|association_with_transcript=-204bp_to_ENST00000281923,NM_002410,uc002ttv.1_5end|coexpression_cluster_id=C47|description=CAGE_peak_11_at_MGAT5_5end|id=chr2:135011615..135011625,+|ontology_enrichment_celltype=CL:0000945!4.54e-36!24;CL:0000826!4.54e-36!24;CL:0000236!9.95e-26!14;CL:0000838!1.78e-14!52;CL:0000542!3.96e-14!53;CL:0000051!3.96e-14!53;CL:0002087!3.14e-08!119;CL:0000738!4.10e-07!140|ontology_enrichment_celltype_v019=CL:0000236;2.13e-53;13!CL:0000945;1.16e-44;24!CL:0000542;5.76e-17;53|ontology_enrichment_celltype_v019_2=CL:0000236,1.40e-49,14;CL:0000945,9.69e-45,24;CL:0000826,9.69e-45,24;CL:0000838,5.27e-20,52;CL:0000542,1.33e-19,53;CL:0000051,1.33e-19,53;CL:0002087,3.10e-08,115;CL:0002031,7.74e-08,120;CL:0000738,9.23e-07,136|ontology_enrichment_development_v019=CL:0000051;5.76e-17;53!UBERON:0001045;8.84e-13;1!UBERON:0006298;3.26e-12;1!UBERON:0004872;3.14e-07;7!UBERON:0006965;9.80e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;3.26e-12;1!DOID:0050177;3.26e-12;1!DOID:0050427;3.26e-12;1|ontology_enrichment_disease_v019_2=DOID:630,2.46e-12,1;DOID:0050177,2.46e-12,1;DOID:0050427,2.46e-12,1|ontology_enrichment_uberon=UBERON:0001155!6.49e-10!9;UBERON:0001829!2.01e-08!2;UBERON:0004177!2.56e-08!7;UBERON:0000059!4.75e-08!11;UBERON:0007023!1.50e-07!115;UBERON:0004921!5.70e-07!129;UBERON:0004185!5.70e-07!129|ontology_enrichment_uberon_v019=UBERON:0001154;8.84e-13;1!UBERON:0001153;8.84e-13;1!UBERON:0009854;8.84e-13;1!UBERON:0002372;1.48e-12;1!UBERON:0001961;1.48e-12;1!UBERON:0001744;1.48e-12;1!UBERON:0001042;1.48e-12;1!UBERON:0001735;1.48e-12;1!UBERON:0000029;3.26e-12;1!UBERON:0001736;3.26e-12;1!UBERON:0006562;6.61e-07;2!UBERON:0001829;9.80e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001154,8.85e-13,1;UBERON:0001153,8.85e-13,1;UBERON:0001045,8.85e-13,1;UBERON:0002372,1.57e-12,1;UBERON:0001961,1.57e-12,1;UBERON:0001744,1.57e-12,1;UBERON:0001735,1.57e-12,1;UBERON:0000029,2.20e-12,1;UBERON:0001736,4.31e-12,1;UBERON:0006298,4.31e-12,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,3.64095842727418,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,1.77901850772711,2.98711155796555,1.60158394814405,2.29900975981793,0.661044872784862,0.954053754535364,5.12291672198504,2.93618594685469,2.29363936875137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14425873296722,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0.157611414598396,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,1.9846640872478,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0.0771741581079447,0,7.05475944542284,0,0,0,0,0,0,2.91350145737546,0.773494655682926,0,0,0,0,0,1.37618785021362,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0,0,0,0,2.42467390852515,0.430333232356058,0,0,0,0,0,0,0,0,0,1.20764276154616,1.9234109538194|short_description=p11@MGAT5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7049 | |||
|TSSclassifier=N | |||
|UniProt=Q09328 | |||
|association_with_transcript=-204bp_to_ENST00000281923,NM_002410,uc002ttv.1_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_11_at_MGAT5_5end | |||
|id=chr2:135011615..135011625,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.54e-36!24;CL:0000826!4.54e-36!24;CL:0000236!9.95e-26!14;CL:0000838!1.78e-14!52;CL:0000542!3.96e-14!53;CL:0000051!3.96e-14!53;CL:0002087!3.14e-08!119;CL:0000738!4.10e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.13e-53;13!CL:0000945;1.16e-44;24!CL:0000542;5.76e-17;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.40e-49,14;CL:0000945,9.69e-45,24;CL:0000826,9.69e-45,24;CL:0000838,5.27e-20,52;CL:0000542,1.33e-19,53;CL:0000051,1.33e-19,53;CL:0002087,3.10e-08,115;CL:0002031,7.74e-08,120;CL:0000738,9.23e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;5.76e-17;53!UBERON:0001045;8.84e-13;1!UBERON:0006298;3.26e-12;1!UBERON:0004872;3.14e-07;7!UBERON:0006965;9.80e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.26e-12;1!DOID:0050177;3.26e-12;1!DOID:0050427;3.26e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.46e-12,1;DOID:0050177,2.46e-12,1;DOID:0050427,2.46e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001155!6.49e-10!9;UBERON:0001829!2.01e-08!2;UBERON:0004177!2.56e-08!7;UBERON:0000059!4.75e-08!11;UBERON:0007023!1.50e-07!115;UBERON:0004921!5.70e-07!129;UBERON:0004185!5.70e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.84e-13;1!UBERON:0001153;8.84e-13;1!UBERON:0009854;8.84e-13;1!UBERON:0002372;1.48e-12;1!UBERON:0001961;1.48e-12;1!UBERON:0001744;1.48e-12;1!UBERON:0001042;1.48e-12;1!UBERON:0001735;1.48e-12;1!UBERON:0000029;3.26e-12;1!UBERON:0001736;3.26e-12;1!UBERON:0006562;6.61e-07;2!UBERON:0001829;9.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,8.85e-13,1;UBERON:0001153,8.85e-13,1;UBERON:0001045,8.85e-13,1;UBERON:0002372,1.57e-12,1;UBERON:0001961,1.57e-12,1;UBERON:0001744,1.57e-12,1;UBERON:0001735,1.57e-12,1;UBERON:0000029,2.20e-12,1;UBERON:0001736,4.31e-12,1;UBERON:0006298,4.31e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,3.64095842727418,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,1.77901850772711,2.98711155796555,1.60158394814405,2.29900975981793,0.661044872784862,0.954053754535364,5.12291672198504,2.93618594685469,2.29363936875137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14425873296722,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0.157611414598396,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,1.9846640872478,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0.0771741581079447,0,7.05475944542284,0,0,0,0,0,0,2.91350145737546,0.773494655682926,0,0,0,0,0,1.37618785021362,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0,0,0,0,2.42467390852515,0.430333232356058,0,0,0,0,0,0,0,0,0,1.20764276154616,1.9234109538194 | |||
|short_description=p11@MGAT5 | |||
}} |
Revision as of 13:34, 12 September 2013
Short description: | p11@MGAT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_MGAT5_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -204bp_to_ENST00000281923, NM_002410, uc002ttv.1_5end |
EntrezGene: | MGAT5 |
HGNC: | 7049 |
UniProt: | Q09328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.40e-49 | 14 |
lymphocyte of B lineage | 9.69e-45 | 24 |
pro-B cell | 9.69e-45 | 24 |
lymphoid lineage restricted progenitor cell | 5.27e-20 | 52 |
lymphocyte | 1.33e-19 | 53 |
common lymphoid progenitor | 1.33e-19 | 53 |
nongranular leukocyte | 3.10e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 7.74e-08 | 120 |
leukocyte | 9.23e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 8.85e-13 | 1 |
caecum | 8.85e-13 | 1 |
midgut | 8.85e-13 | 1 |
tonsil | 1.57e-12 | 1 |
mucosa-associated lymphoid tissue | 1.57e-12 | 1 |
lymphoid tissue | 1.57e-12 | 1 |
tonsillar ring | 1.57e-12 | 1 |
lymph node | 2.20e-12 | 1 |
submandibular gland | 4.31e-12 | 1 |
submandibular gland primordium | 4.31e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.46e-12 | 1 |
monogenic disease | 2.46e-12 | 1 |
xeroderma pigmentosum | 2.46e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.