FFCP PHASE1:Hg19::chr2:119750034..119750055,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C433|description=CAGE_peak_at_chr2:119750034..119750055,-|id=chr2:119750034..119750055,-|ontology_enrichment_celltype=CL:0002194!5.61e-20!63;CL:0000576!5.61e-20!63;CL:0000040!5.61e-20!63;CL:0000559!5.61e-20!63;CL:0002009!3.12e-19!65;CL:0000839!1.49e-17!70;CL:0000557!3.02e-17!71;CL:0000766!7.88e-16!76;CL:0002619!3.29e-14!3;CL:0002057!4.72e-10!42;CL:0002087!1.10e-09!119;CL:0000763!2.24e-09!112;CL:0000049!2.24e-09!112;CL:0000860!3.08e-09!45;CL:0002031!4.54e-08!124;CL:0000738!1.41e-07!140;CL:0000235!1.71e-07!10|ontology_enrichment_celltype_v019=CL:0000235;7.60e-38;6!CL:0000473;1.58e-10;39!CL:0000234;1.58e-10;39!CL:0002619;1.53e-09;3|ontology_enrichment_celltype_v019_2=CL:0000235,9.19e-38,6;CL:0002194,1.39e-10,59;CL:0000576,1.39e-10,59;CL:0000040,1.39e-10,59;CL:0000559,1.39e-10,59;CL:0002009,3.00e-10,61;CL:0002619,1.54e-09,3;CL:0000839,1.69e-09,66;CL:0000557,2.31e-09,67;CL:0000766,9.82e-09,72;CL:0000473,1.02e-08,48;CL:0000234,1.02e-08,48|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.46e-19!115;UBERON:0002390!1.29e-16!102;UBERON:0003061!1.29e-16!102;UBERON:0002193!2.95e-16!112;UBERON:0002371!7.99e-15!80;UBERON:0001474!1.72e-13!86;UBERON:0004765!3.32e-12!101;UBERON:0001434!3.32e-12!101;UBERON:0000926!2.79e-07!448;UBERON:0004120!2.79e-07!448;UBERON:0006603!2.79e-07!448|ontology_enrichment_uberon_v019=UBERON:0002171;3.15e-26;1!UBERON:0006518;3.15e-26;1!UBERON:0008949;3.15e-26;1!UBERON:0000101;3.15e-26;1!UBERON:0002167;3.15e-26;1|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.58e-26,1;UBERON:0006518,3.58e-26,1;UBERON:0008949,3.58e-26,1;UBERON:0000101,3.58e-26,1;UBERON:0002167,3.58e-26,1;UBERON:0002371,2.73e-08,76;UBERON:0001474,1.06e-07,82;UBERON:0004765,4.89e-07,90;UBERON:0002405,8.13e-07,93|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,1.34349284543955,0.647787332037959,0.77272670290256,0,0,0,0.464858073811369,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,0.702012795417713,8.17471392588005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.533937062838473,0,3.31391244277756,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.563903507879121,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chr2:119750034..119750055,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_at_chr2:119750034..119750055,- | |||
|id=chr2:119750034..119750055,- | |||
|ontology_enrichment_celltype=CL:0002194!5.61e-20!63;CL:0000576!5.61e-20!63;CL:0000040!5.61e-20!63;CL:0000559!5.61e-20!63;CL:0002009!3.12e-19!65;CL:0000839!1.49e-17!70;CL:0000557!3.02e-17!71;CL:0000766!7.88e-16!76;CL:0002619!3.29e-14!3;CL:0002057!4.72e-10!42;CL:0002087!1.10e-09!119;CL:0000763!2.24e-09!112;CL:0000049!2.24e-09!112;CL:0000860!3.08e-09!45;CL:0002031!4.54e-08!124;CL:0000738!1.41e-07!140;CL:0000235!1.71e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.60e-38;6!CL:0000473;1.58e-10;39!CL:0000234;1.58e-10;39!CL:0002619;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.19e-38,6;CL:0002194,1.39e-10,59;CL:0000576,1.39e-10,59;CL:0000040,1.39e-10,59;CL:0000559,1.39e-10,59;CL:0002009,3.00e-10,61;CL:0002619,1.54e-09,3;CL:0000839,1.69e-09,66;CL:0000557,2.31e-09,67;CL:0000766,9.82e-09,72;CL:0000473,1.02e-08,48;CL:0000234,1.02e-08,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.46e-19!115;UBERON:0002390!1.29e-16!102;UBERON:0003061!1.29e-16!102;UBERON:0002193!2.95e-16!112;UBERON:0002371!7.99e-15!80;UBERON:0001474!1.72e-13!86;UBERON:0004765!3.32e-12!101;UBERON:0001434!3.32e-12!101;UBERON:0000926!2.79e-07!448;UBERON:0004120!2.79e-07!448;UBERON:0006603!2.79e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.15e-26;1!UBERON:0006518;3.15e-26;1!UBERON:0008949;3.15e-26;1!UBERON:0000101;3.15e-26;1!UBERON:0002167;3.15e-26;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.58e-26,1;UBERON:0006518,3.58e-26,1;UBERON:0008949,3.58e-26,1;UBERON:0000101,3.58e-26,1;UBERON:0002167,3.58e-26,1;UBERON:0002371,2.73e-08,76;UBERON:0001474,1.06e-07,82;UBERON:0004765,4.89e-07,90;UBERON:0002405,8.13e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,1.34349284543955,0.647787332037959,0.77272670290256,0,0,0,0.464858073811369,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,0.702012795417713,8.17471392588005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.533937062838473,0,3.31391244277756,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.563903507879121,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:119750034..119750055,- | |||
}} |
Revision as of 13:16, 12 September 2013
Short description: | p@chr2:119750034..119750055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:119750034..119750055, - |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.19e-38 | 6 |
monopoietic cell | 1.39e-10 | 59 |
monocyte | 1.39e-10 | 59 |
monoblast | 1.39e-10 | 59 |
promonocyte | 1.39e-10 | 59 |
macrophage dendritic cell progenitor | 3.00e-10 | 61 |
adult endothelial progenitor cell | 1.54e-09 | 3 |
myeloid lineage restricted progenitor cell | 1.69e-09 | 66 |
granulocyte monocyte progenitor cell | 2.31e-09 | 67 |
myeloid leukocyte | 9.82e-09 | 72 |
defensive cell | 1.02e-08 | 48 |
phagocyte | 1.02e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.58e-26 | 1 |
right lung lobe | 3.58e-26 | 1 |
lower lobe of lung | 3.58e-26 | 1 |
lobe of lung | 3.58e-26 | 1 |
right lung | 3.58e-26 | 1 |
bone marrow | 2.73e-08 | 76 |
bone element | 1.06e-07 | 82 |
skeletal element | 4.89e-07 | 90 |
immune system | 8.13e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.