FFCP PHASE1:Hg19::chr2:114004369..114004400,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C225|description=CAGE_peak_at_chr2:114004369..114004400,-|id=chr2:114004369..114004400,-|ontology_enrichment_celltype=CL:1000497!2.86e-18!18;CL:0002518!2.86e-18!18;CL:1000507!1.41e-12!12;CL:1000494!1.41e-12!12;CL:1000449!1.80e-12!16;CL:0002149!3.54e-12!6;CL:0002255!3.54e-12!6;CL:0000159!3.97e-10!2|ontology_enrichment_celltype_v019=CL:0002149;1.93e-17;6!CL:0002255;1.93e-17;6!CL:0000047;1.29e-13;2!CL:0000083;1.31e-07;4|ontology_enrichment_celltype_v019_2=CL:0002149,1.71e-17,6;CL:0002255,1.71e-17,6;CL:0000083,1.31e-07,4|ontology_enrichment_development_v019=UBERON:0007123;9.44e-21;5!UBERON:0005795;7.12e-11;10|ontology_enrichment_disease=DOID:3001!3.54e-12!6;DOID:193!5.67e-11!29;DOID:299!2.48e-10!25;DOID:4468!2.65e-10!2;DOID:120!2.19e-09!27|ontology_enrichment_disease_v019=DOID:3001;1.93e-17;6!DOID:4074;6.43e-14;2!DOID:4905;6.43e-14;2!DOID:3498;6.43e-14;2!DOID:4468;7.30e-14;2!DOID:299;1.26e-09;25!DOID:120;5.82e-09;27!DOID:193;2.19e-08;29!DOID:1793;1.31e-07;4|ontology_enrichment_disease_v019_2=DOID:3001,1.71e-17,6;DOID:4074,6.43e-14,2;DOID:4905,6.43e-14,2;DOID:3498,6.43e-14,2;DOID:4468,7.30e-14,2;DOID:299,1.20e-09,25;DOID:120,5.58e-09,27;DOID:193,2.10e-08,29;DOID:1793,1.31e-07,4|ontology_enrichment_uberon=UBERON:0002113!1.38e-28!27;UBERON:0003918!1.38e-28!27;UBERON:0005095!1.38e-28!27;UBERON:0007687!1.38e-28!27;UBERON:0000489!1.29e-23!32;UBERON:0006554!9.47e-19!44;UBERON:0001008!2.95e-18!45;UBERON:0000080!5.34e-18!18;UBERON:0002120!5.34e-18!18;UBERON:0004875!5.34e-18!18;UBERON:0005721!5.34e-18!18;UBERON:0005754!5.34e-18!18;UBERON:0007297!5.34e-18!18;UBERON:0004876!4.90e-16!20;UBERON:0003887!3.40e-15!21;UBERON:0006555!4.70e-15!17;UBERON:0005103!4.70e-15!17;UBERON:0000083!4.70e-15!17;UBERON:0009201!4.70e-15!17;UBERON:0004819!4.70e-15!17;UBERON:0006553!4.70e-15!17;UBERON:0003074!4.70e-15!17;UBERON:0003060!4.70e-15!17;UBERON:0002046!8.27e-15!5;UBERON:0004117!8.27e-15!5;UBERON:0007689!8.27e-15!5;UBERON:0007123!8.27e-15!5;UBERON:0003091!8.27e-15!5;UBERON:0000058!8.64e-15!26;UBERON:0006947!1.46e-13!3;UBERON:0004054!1.46e-13!3;UBERON:0009773!1.41e-12!12;UBERON:0001231!1.41e-12!12;UBERON:0004810!1.41e-12!12;UBERON:0004211!1.80e-12!16;UBERON:0001285!1.80e-12!16;UBERON:0007684!1.80e-12!16;UBERON:0003220!1.80e-12!16;UBERON:0004208!1.80e-12!16;UBERON:0005172!2.01e-12!55;UBERON:0005173!2.01e-12!55;UBERON:0002417!6.72e-11!61;UBERON:0000916!6.72e-11!61;UBERON:0003133!1.73e-10!48;UBERON:0003886!1.84e-10!63;UBERON:0005904!2.73e-10!4;UBERON:0004175!7.18e-10!25;UBERON:0003064!9.72e-10!37;UBERON:0003135!1.30e-09!11;UBERON:0005156!1.59e-09!59;UBERON:0000990!1.59e-09!59;UBERON:0003103!2.75e-09!69;UBERON:0002553!4.09e-09!70;UBERON:0009722!9.56e-07!11;UBERON:0007690!9.56e-07!11|ontology_enrichment_uberon_v019=UBERON:0002046;9.44e-21;5!UBERON:0000995;8.97e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.10e-20,5;UBERON:0004117,1.10e-20,5;UBERON:0007689,1.10e-20,5;UBERON:0007123,1.10e-20,5;UBERON:0003091,1.10e-20,5;UBERON:0009722,5.79e-10,11;UBERON:0007690,5.79e-10,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385076685522074,0.784349769176855,1.46139224653261,0.211103257785751,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32994193584081,0.816164040795739,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,47.099393629614,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,2.2562765983567,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.524545881349981,0,0,0,0,0,0.25426853765475,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C225 | |||
|description=CAGE_peak_at_chr2:114004369..114004400,- | |||
|id=chr2:114004369..114004400,- | |||
|ontology_enrichment_celltype=CL:1000497!2.86e-18!18;CL:0002518!2.86e-18!18;CL:1000507!1.41e-12!12;CL:1000494!1.41e-12!12;CL:1000449!1.80e-12!16;CL:0002149!3.54e-12!6;CL:0002255!3.54e-12!6;CL:0000159!3.97e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.93e-17;6!CL:0002255;1.93e-17;6!CL:0000047;1.29e-13;2!CL:0000083;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.71e-17,6;CL:0002255,1.71e-17,6;CL:0000083,1.31e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;9.44e-21;5!UBERON:0005795;7.12e-11;10 | |||
|ontology_enrichment_disease=DOID:3001!3.54e-12!6;DOID:193!5.67e-11!29;DOID:299!2.48e-10!25;DOID:4468!2.65e-10!2;DOID:120!2.19e-09!27 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.93e-17;6!DOID:4074;6.43e-14;2!DOID:4905;6.43e-14;2!DOID:3498;6.43e-14;2!DOID:4468;7.30e-14;2!DOID:299;1.26e-09;25!DOID:120;5.82e-09;27!DOID:193;2.19e-08;29!DOID:1793;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.71e-17,6;DOID:4074,6.43e-14,2;DOID:4905,6.43e-14,2;DOID:3498,6.43e-14,2;DOID:4468,7.30e-14,2;DOID:299,1.20e-09,25;DOID:120,5.58e-09,27;DOID:193,2.10e-08,29;DOID:1793,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.38e-28!27;UBERON:0003918!1.38e-28!27;UBERON:0005095!1.38e-28!27;UBERON:0007687!1.38e-28!27;UBERON:0000489!1.29e-23!32;UBERON:0006554!9.47e-19!44;UBERON:0001008!2.95e-18!45;UBERON:0000080!5.34e-18!18;UBERON:0002120!5.34e-18!18;UBERON:0004875!5.34e-18!18;UBERON:0005721!5.34e-18!18;UBERON:0005754!5.34e-18!18;UBERON:0007297!5.34e-18!18;UBERON:0004876!4.90e-16!20;UBERON:0003887!3.40e-15!21;UBERON:0006555!4.70e-15!17;UBERON:0005103!4.70e-15!17;UBERON:0000083!4.70e-15!17;UBERON:0009201!4.70e-15!17;UBERON:0004819!4.70e-15!17;UBERON:0006553!4.70e-15!17;UBERON:0003074!4.70e-15!17;UBERON:0003060!4.70e-15!17;UBERON:0002046!8.27e-15!5;UBERON:0004117!8.27e-15!5;UBERON:0007689!8.27e-15!5;UBERON:0007123!8.27e-15!5;UBERON:0003091!8.27e-15!5;UBERON:0000058!8.64e-15!26;UBERON:0006947!1.46e-13!3;UBERON:0004054!1.46e-13!3;UBERON:0009773!1.41e-12!12;UBERON:0001231!1.41e-12!12;UBERON:0004810!1.41e-12!12;UBERON:0004211!1.80e-12!16;UBERON:0001285!1.80e-12!16;UBERON:0007684!1.80e-12!16;UBERON:0003220!1.80e-12!16;UBERON:0004208!1.80e-12!16;UBERON:0005172!2.01e-12!55;UBERON:0005173!2.01e-12!55;UBERON:0002417!6.72e-11!61;UBERON:0000916!6.72e-11!61;UBERON:0003133!1.73e-10!48;UBERON:0003886!1.84e-10!63;UBERON:0005904!2.73e-10!4;UBERON:0004175!7.18e-10!25;UBERON:0003064!9.72e-10!37;UBERON:0003135!1.30e-09!11;UBERON:0005156!1.59e-09!59;UBERON:0000990!1.59e-09!59;UBERON:0003103!2.75e-09!69;UBERON:0002553!4.09e-09!70;UBERON:0009722!9.56e-07!11;UBERON:0007690!9.56e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;9.44e-21;5!UBERON:0000995;8.97e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.10e-20,5;UBERON:0004117,1.10e-20,5;UBERON:0007689,1.10e-20,5;UBERON:0007123,1.10e-20,5;UBERON:0003091,1.10e-20,5;UBERON:0009722,5.79e-10,11;UBERON:0007690,5.79e-10,11 | |||
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|short_description=p@chr2:114004369..114004400,- | |||
}} |
Revision as of 13:09, 12 September 2013
Short description: | p@chr2:114004369..114004400, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:114004369..114004400, - |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.71e-17 | 6 |
stromal cell of endometrium | 1.71e-17 | 6 |
epithelial cell of pancreas | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.10e-20 | 5 |
pharyngeal pouch | 1.10e-20 | 5 |
thyroid diverticulum | 1.10e-20 | 5 |
pharyngeal pouch 2 | 1.10e-20 | 5 |
thyroid primordium | 1.10e-20 | 5 |
entire pharyngeal arch endoderm | 5.79e-10 | 11 |
early pharyngeal endoderm | 5.79e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.71e-17 | 6 |
pancreas adenocarcinoma | 6.43e-14 | 2 |
pancreatic carcinoma | 6.43e-14 | 2 |
pancreatic ductal adenocarcinoma | 6.43e-14 | 2 |
clear cell adenocarcinoma | 7.30e-14 | 2 |
adenocarcinoma | 1.20e-09 | 25 |
female reproductive organ cancer | 5.58e-09 | 27 |
reproductive organ cancer | 2.10e-08 | 29 |
pancreatic cancer | 1.31e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.