FFCP PHASE1:Hg19::chr2:113587636..113587648,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr2:113587636..113587648,-|id=chr2:113587636..113587648,-|ontology_enrichment_celltype=CL:0002057!1.72e-42!42;CL:0000860!5.84e-39!45;CL:0002009!1.21e-30!65;CL:0002194!5.54e-30!63;CL:0000576!5.54e-30!63;CL:0000040!5.54e-30!63;CL:0000559!5.54e-30!63;CL:0000557!3.73e-27!71;CL:0000766!2.24e-26!76;CL:0000839!5.99e-26!70;CL:0000763!1.38e-17!112;CL:0000049!1.38e-17!112;CL:0000359!9.31e-16!32;CL:0002087!5.29e-14!119;CL:0000738!9.21e-14!140;CL:0002031!3.18e-11!124;CL:0000192!7.90e-11!42;CL:0000514!7.90e-11!42;CL:0000037!1.79e-10!172;CL:0000566!1.79e-10!172;CL:0002595!2.69e-10!5;CL:0000988!2.70e-09!182;CL:0000034!1.03e-08!444;CL:0000723!1.17e-08!436;CL:0002032!1.46e-08!165;CL:0000837!1.46e-08!165;CL:0000187!2.62e-08!54;CL:0000048!4.38e-08!430;CL:0000680!1.26e-07!57;CL:0000056!1.26e-07!57;CL:0000355!1.26e-07!57;CL:0002371!1.92e-07!591;CL:0000183!3.27e-07!59;CL:0000393!5.13e-07!60;CL:0000211!5.13e-07!60;CL:0002592!5.63e-07!3;CL:0000144!8.63e-07!625|ontology_enrichment_celltype_v019=CL:0000860;9.45e-75;33!CL:0002057;9.45e-75;33!CL:0000473;8.94e-52;39!CL:0000234;8.94e-52;39!CL:0000576;6.92e-41;48!CL:0000766;6.84e-29;69!CL:0002087;2.60e-13;104!CL:0002593;4.18e-12;2!CL:0000763;1.94e-11;100!CL:0002393;3.13e-09;6!CL:0002397;3.13e-09;6!CL:0000738;1.18e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,5.08e-82,42;CL:0002057,5.08e-82,42;CL:0000473,3.90e-71,48;CL:0000234,3.90e-71,48;CL:0002194,1.57e-60,59;CL:0000576,1.57e-60,59;CL:0000040,1.57e-60,59;CL:0000559,1.57e-60,59;CL:0002009,2.08e-58,61;CL:0000839,1.17e-53,66;CL:0000557,8.58e-53,67;CL:0000766,8.12e-49,72;CL:0002087,3.39e-31,115;CL:0000763,6.05e-31,108;CL:0000049,6.05e-31,108;CL:0002031,2.40e-27,120;CL:0000738,1.41e-25,136;CL:0000037,1.08e-19,168;CL:0002032,4.55e-19,161;CL:0000837,4.55e-19,161;CL:0000988,2.03e-18,177;CL:0002593,4.82e-12,2;CL:0000034,6.61e-10,441;CL:0000048,1.63e-09,427;CL:0000723,2.71e-09,433;CL:0000134,7.12e-09,354;CL:0002320,1.38e-08,361;CL:0000219,1.42e-07,386|ontology_enrichment_development_v019=CL:0002057;1.23e-60;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060085;8.67e-07;1!DOID:3165;8.67e-07;1!DOID:0060121;8.67e-07;1!DOID:2438;8.67e-07;1!DOID:4418;8.67e-07;1|ontology_enrichment_disease_v019_2=DOID:0060085,9.73e-07,1;DOID:3165,9.73e-07,1;DOID:0060121,9.73e-07,1;DOID:2438,9.73e-07,1;DOID:4418,9.73e-07,1|ontology_enrichment_uberon=UBERON:0002204!9.77e-24!167;UBERON:0002371!6.56e-23!80;UBERON:0001474!4.84e-22!86;UBERON:0002390!1.91e-20!102;UBERON:0003061!1.91e-20!102;UBERON:0003081!2.77e-19!216;UBERON:0002193!1.16e-18!112;UBERON:0004765!2.82e-18!101;UBERON:0001434!2.82e-18!101;UBERON:0002405!1.28e-14!115;UBERON:0004573!9.23e-12!33;UBERON:0004571!9.23e-12!33;UBERON:0001637!7.90e-11!42;UBERON:0003509!7.90e-11!42;UBERON:0004572!7.90e-11!42;UBERON:0003834!2.69e-10!5;UBERON:0001533!2.69e-10!5;UBERON:0003513!8.61e-09!8;UBERON:0001981!3.85e-07!60;UBERON:0007500!3.85e-07!60;UBERON:0004537!3.85e-07!60;UBERON:0006965!3.85e-07!60;UBERON:0001621!5.63e-07!3;UBERON:0000926!7.12e-07!448;UBERON:0004120!7.12e-07!448;UBERON:0006603!7.12e-07!448;UBERON:0001134!7.92e-07!61;UBERON:0002036!7.92e-07!61;UBERON:0003082!7.92e-07!61|ontology_enrichment_uberon_v019=UBERON:0002456;4.18e-12;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-46,76;UBERON:0001474,2.67e-42,82;UBERON:0004765,4.07e-38,90;UBERON:0002390,1.74e-37,98;UBERON:0003061,1.74e-37,98;UBERON:0002405,9.90e-37,93;UBERON:0001434,8.12e-34,100;UBERON:0002193,1.50e-33,108;UBERON:0002204,2.26e-25,167;UBERON:0003081,6.83e-25,203;UBERON:0000926,4.08e-15,315;UBERON:0004120,4.08e-15,315;UBERON:0006603,4.08e-15,315;UBERON:0002456,4.82e-12,2;UBERON:0002384,3.41e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0.30120591877825,0,0,0,0,4.43196326825502,5.41470008169383,2.60413044859022,0,0,0,0,0,0.242584061187816,2.09186133215116,1.6446715520873,3.40677007984614,6.61692502340946,4.86705342405291,7.09446689665756,31.7166026277689,17.4280864567633,13.5426486594342,1.31769637679823,0,1.57306439111559,37.648318761621,17.6510964891852,32.6061934157511,0.659702600373432,0.598390972864896,0.852449501065388,32.2132254877728,32.9083430320861,43.5975574296902,2.51248665256743,0.521482918420201,3.25783267057675,21.7943820948013,12.1531619875896,40.5071855924332,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr2:113587636..113587648,- | |||
|id=chr2:113587636..113587648,- | |||
|ontology_enrichment_celltype=CL:0002057!1.72e-42!42;CL:0000860!5.84e-39!45;CL:0002009!1.21e-30!65;CL:0002194!5.54e-30!63;CL:0000576!5.54e-30!63;CL:0000040!5.54e-30!63;CL:0000559!5.54e-30!63;CL:0000557!3.73e-27!71;CL:0000766!2.24e-26!76;CL:0000839!5.99e-26!70;CL:0000763!1.38e-17!112;CL:0000049!1.38e-17!112;CL:0000359!9.31e-16!32;CL:0002087!5.29e-14!119;CL:0000738!9.21e-14!140;CL:0002031!3.18e-11!124;CL:0000192!7.90e-11!42;CL:0000514!7.90e-11!42;CL:0000037!1.79e-10!172;CL:0000566!1.79e-10!172;CL:0002595!2.69e-10!5;CL:0000988!2.70e-09!182;CL:0000034!1.03e-08!444;CL:0000723!1.17e-08!436;CL:0002032!1.46e-08!165;CL:0000837!1.46e-08!165;CL:0000187!2.62e-08!54;CL:0000048!4.38e-08!430;CL:0000680!1.26e-07!57;CL:0000056!1.26e-07!57;CL:0000355!1.26e-07!57;CL:0002371!1.92e-07!591;CL:0000183!3.27e-07!59;CL:0000393!5.13e-07!60;CL:0000211!5.13e-07!60;CL:0002592!5.63e-07!3;CL:0000144!8.63e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.45e-75;33!CL:0002057;9.45e-75;33!CL:0000473;8.94e-52;39!CL:0000234;8.94e-52;39!CL:0000576;6.92e-41;48!CL:0000766;6.84e-29;69!CL:0002087;2.60e-13;104!CL:0002593;4.18e-12;2!CL:0000763;1.94e-11;100!CL:0002393;3.13e-09;6!CL:0002397;3.13e-09;6!CL:0000738;1.18e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.08e-82,42;CL:0002057,5.08e-82,42;CL:0000473,3.90e-71,48;CL:0000234,3.90e-71,48;CL:0002194,1.57e-60,59;CL:0000576,1.57e-60,59;CL:0000040,1.57e-60,59;CL:0000559,1.57e-60,59;CL:0002009,2.08e-58,61;CL:0000839,1.17e-53,66;CL:0000557,8.58e-53,67;CL:0000766,8.12e-49,72;CL:0002087,3.39e-31,115;CL:0000763,6.05e-31,108;CL:0000049,6.05e-31,108;CL:0002031,2.40e-27,120;CL:0000738,1.41e-25,136;CL:0000037,1.08e-19,168;CL:0002032,4.55e-19,161;CL:0000837,4.55e-19,161;CL:0000988,2.03e-18,177;CL:0002593,4.82e-12,2;CL:0000034,6.61e-10,441;CL:0000048,1.63e-09,427;CL:0000723,2.71e-09,433;CL:0000134,7.12e-09,354;CL:0002320,1.38e-08,361;CL:0000219,1.42e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-60;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;8.67e-07;1!DOID:3165;8.67e-07;1!DOID:0060121;8.67e-07;1!DOID:2438;8.67e-07;1!DOID:4418;8.67e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,9.73e-07,1;DOID:3165,9.73e-07,1;DOID:0060121,9.73e-07,1;DOID:2438,9.73e-07,1;DOID:4418,9.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002204!9.77e-24!167;UBERON:0002371!6.56e-23!80;UBERON:0001474!4.84e-22!86;UBERON:0002390!1.91e-20!102;UBERON:0003061!1.91e-20!102;UBERON:0003081!2.77e-19!216;UBERON:0002193!1.16e-18!112;UBERON:0004765!2.82e-18!101;UBERON:0001434!2.82e-18!101;UBERON:0002405!1.28e-14!115;UBERON:0004573!9.23e-12!33;UBERON:0004571!9.23e-12!33;UBERON:0001637!7.90e-11!42;UBERON:0003509!7.90e-11!42;UBERON:0004572!7.90e-11!42;UBERON:0003834!2.69e-10!5;UBERON:0001533!2.69e-10!5;UBERON:0003513!8.61e-09!8;UBERON:0001981!3.85e-07!60;UBERON:0007500!3.85e-07!60;UBERON:0004537!3.85e-07!60;UBERON:0006965!3.85e-07!60;UBERON:0001621!5.63e-07!3;UBERON:0000926!7.12e-07!448;UBERON:0004120!7.12e-07!448;UBERON:0006603!7.12e-07!448;UBERON:0001134!7.92e-07!61;UBERON:0002036!7.92e-07!61;UBERON:0003082!7.92e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;4.18e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-46,76;UBERON:0001474,2.67e-42,82;UBERON:0004765,4.07e-38,90;UBERON:0002390,1.74e-37,98;UBERON:0003061,1.74e-37,98;UBERON:0002405,9.90e-37,93;UBERON:0001434,8.12e-34,100;UBERON:0002193,1.50e-33,108;UBERON:0002204,2.26e-25,167;UBERON:0003081,6.83e-25,203;UBERON:0000926,4.08e-15,315;UBERON:0004120,4.08e-15,315;UBERON:0006603,4.08e-15,315;UBERON:0002456,4.82e-12,2;UBERON:0002384,3.41e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0.30120591877825,0,0,0,0,4.43196326825502,5.41470008169383,2.60413044859022,0,0,0,0,0,0.242584061187816,2.09186133215116,1.6446715520873,3.40677007984614,6.61692502340946,4.86705342405291,7.09446689665756,31.7166026277689,17.4280864567633,13.5426486594342,1.31769637679823,0,1.57306439111559,37.648318761621,17.6510964891852,32.6061934157511,0.659702600373432,0.598390972864896,0.852449501065388,32.2132254877728,32.9083430320861,43.5975574296902,2.51248665256743,0.521482918420201,3.25783267057675,21.7943820948013,12.1531619875896,40.5071855924332,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.277765335475589,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0,0,0,0,0.308033580176089,2.12922412126809,0,0.55597265731176,0.572499546967965,0,0,0,0,0,0,0.78494864019923,0,0,0,0.606547444719948,1.58510321173008,0.842516912477962,0,1.21856744815642,2.11300293513511,0,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19228767021794,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,1.47855149989634,0.318593534327405,3.59842489730884,0.155262956876259,0,0,0,0,0,0,0.727394636810238,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:113587636..113587648,- | |||
}} |
Revision as of 13:01, 12 September 2013
Short description: | p@chr2:113587636..113587648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:113587636..113587648, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.08e-82 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.08e-82 | 42 |
defensive cell | 3.90e-71 | 48 |
phagocyte | 3.90e-71 | 48 |
monopoietic cell | 1.57e-60 | 59 |
monocyte | 1.57e-60 | 59 |
monoblast | 1.57e-60 | 59 |
promonocyte | 1.57e-60 | 59 |
macrophage dendritic cell progenitor | 2.08e-58 | 61 |
myeloid lineage restricted progenitor cell | 1.17e-53 | 66 |
granulocyte monocyte progenitor cell | 8.58e-53 | 67 |
myeloid leukocyte | 8.12e-49 | 72 |
nongranular leukocyte | 3.39e-31 | 115 |
myeloid cell | 6.05e-31 | 108 |
common myeloid progenitor | 6.05e-31 | 108 |
hematopoietic lineage restricted progenitor cell | 2.40e-27 | 120 |
leukocyte | 1.41e-25 | 136 |
hematopoietic stem cell | 1.08e-19 | 168 |
hematopoietic oligopotent progenitor cell | 4.55e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.55e-19 | 161 |
hematopoietic cell | 2.03e-18 | 177 |
smooth muscle cell of the internal thoracic artery | 4.82e-12 | 2 |
stem cell | 6.61e-10 | 441 |
multi fate stem cell | 1.63e-09 | 427 |
somatic stem cell | 2.71e-09 | 433 |
mesenchymal cell | 7.12e-09 | 354 |
connective tissue cell | 1.38e-08 | 361 |
motile cell | 1.42e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.23e-46 | 76 |
bone element | 2.67e-42 | 82 |
skeletal element | 4.07e-38 | 90 |
hematopoietic system | 1.74e-37 | 98 |
blood island | 1.74e-37 | 98 |
immune system | 9.90e-37 | 93 |
skeletal system | 8.12e-34 | 100 |
hemolymphoid system | 1.50e-33 | 108 |
musculoskeletal system | 2.26e-25 | 167 |
lateral plate mesoderm | 6.83e-25 | 203 |
mesoderm | 4.08e-15 | 315 |
mesoderm-derived structure | 4.08e-15 | 315 |
presumptive mesoderm | 4.08e-15 | 315 |
internal thoracic artery | 4.82e-12 | 2 |
connective tissue | 3.41e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 9.73e-07 | 1 |
skin benign neoplasm | 9.73e-07 | 1 |
integumentary system benign neoplasm | 9.73e-07 | 1 |
dermis tumor | 9.73e-07 | 1 |
cutaneous fibrous histiocytoma | 9.73e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.