FFCP PHASE1:Hg19::chr2:107502615..107502628,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84620|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10861|TSSclassifier=S|UniProt=Q96JF0|association_with_transcript=-5bp_to_NM_001142351,uc002tdq.2_5end|coexpression_cluster_id=C1878|description=CAGE_peak_5_at_ST6GAL2_5end|id=chr2:107502615..107502628,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;5.50e-07;6!CL:0000404;5.50e-07;6|ontology_enrichment_celltype_v019_2=CL:0000540,5.74e-07,6;CL:0000031,5.74e-07,6;CL:0000404,5.74e-07,6|ontology_enrichment_development_v019=CL:0000031;5.50e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.43e-38!57;UBERON:0005068!6.43e-38!57;UBERON:0006241!6.43e-38!57;UBERON:0007135!6.43e-38!57;UBERON:0002616!7.85e-34!59;UBERON:0001017!3.44e-33!82;UBERON:0002346!3.78e-32!90;UBERON:0007023!1.83e-31!115;UBERON:0003075!5.51e-31!86;UBERON:0007284!5.51e-31!86;UBERON:0005743!7.16e-31!86;UBERON:0000955!2.04e-29!69;UBERON:0006238!2.04e-29!69;UBERON:0000073!5.23e-29!94;UBERON:0001016!5.23e-29!94;UBERON:0001893!4.06e-28!34;UBERON:0002020!5.07e-28!34;UBERON:0003528!5.07e-28!34;UBERON:0002780!1.19e-27!41;UBERON:0001890!1.19e-27!41;UBERON:0006240!1.19e-27!41;UBERON:0002791!5.11e-27!33;UBERON:0003080!9.56e-27!42;UBERON:0001869!3.84e-26!32;UBERON:0002619!1.33e-20!22;UBERON:0003056!2.21e-20!61;UBERON:0000956!3.70e-19!25;UBERON:0000203!3.70e-19!25;UBERON:0000924!4.05e-19!173;UBERON:0006601!4.05e-19!173;UBERON:0001950!2.56e-18!20;UBERON:0004121!4.51e-18!169;UBERON:0000153!1.29e-15!129;UBERON:0007811!1.29e-15!129;UBERON:0000033!1.74e-14!123;UBERON:0000025!7.79e-13!194;UBERON:0003076!3.65e-12!15;UBERON:0003057!3.65e-12!15;UBERON:0004733!9.50e-11!12;UBERON:0002028!9.50e-11!12;UBERON:0007277!9.50e-11!12;UBERON:0000119!1.80e-10!312;UBERON:0002308!1.81e-10!9;UBERON:0000125!1.81e-10!9;UBERON:0000483!7.17e-10!309;UBERON:0004732!1.02e-09!13;UBERON:0004111!2.32e-08!241;UBERON:0002420!2.50e-08!9;UBERON:0007245!2.50e-08!9;UBERON:0010009!2.50e-08!9;UBERON:0010011!2.50e-08!9;UBERON:0000454!2.50e-08!9;UBERON:0009663!2.99e-08!7;UBERON:0000481!4.17e-08!347;UBERON:0002680!5.24e-08!9;UBERON:0001895!5.24e-08!9;UBERON:0010092!5.24e-08!9;UBERON:0000064!1.07e-07!219;UBERON:0000477!1.35e-07!286;UBERON:0002021!1.90e-07!5;UBERON:0001872!1.93e-07!5;UBERON:0000922!3.77e-07!612;UBERON:0002298!6.97e-07!8|ontology_enrichment_uberon_v019=UBERON:0000922;4.59e-13;49!UBERON:0001950;9.54e-09;20!UBERON:0002050;3.20e-08;5!UBERON:0005423;3.20e-08;5!UBERON:0002780;4.22e-08;41!UBERON:0001890;4.22e-08;41!UBERON:0002619;6.69e-08;22!UBERON:0001893;1.03e-07;34!UBERON:0000956;7.07e-07;25!UBERON:0000203;7.07e-07;25!UBERON:0001869;7.48e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-11,81;UBERON:0002346,6.85e-11,86;UBERON:0001049,9.57e-11,56;UBERON:0005068,9.57e-11,56;UBERON:0006241,9.57e-11,56;UBERON:0007135,9.57e-11,56;UBERON:0001016,3.87e-10,89;UBERON:0000073,9.65e-10,53;UBERON:0002616,9.65e-10,53;UBERON:0002780,1.83e-09,41;UBERON:0001890,1.83e-09,41;UBERON:0003080,1.83e-09,41;UBERON:0006240,1.83e-09,41;UBERON:0003075,8.31e-09,82;UBERON:0007284,8.31e-09,82;UBERON:0001950,1.01e-08,20;UBERON:0010314,2.07e-08,132;UBERON:0010371,2.70e-08,104;UBERON:0000955,3.27e-08,68;UBERON:0006238,3.27e-08,68;UBERON:0002619,7.05e-08,22;UBERON:0004121,7.07e-08,171;UBERON:0000924,7.07e-08,171;UBERON:0006601,7.07e-08,171;UBERON:0001893,7.37e-08,34;UBERON:0003056,6.12e-07,61;UBERON:0000956,7.40e-07,25;UBERON:0000203,7.40e-07,25;UBERON:0002791,9.80e-07,32;UBERON:0001869,9.80e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1811437882044,1.94653948121054,0,0.221729397462564,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,1.97334038733728,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0.403008392910561,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,3.12899064659632,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.927443239800615,3.17003474436719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,4.63973287666617,3.01529277601828,7.01732626818479,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,1.99267679560631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10861 | |||
|TSSclassifier=S | |||
|UniProt=Q96JF0 | |||
|association_with_transcript=-5bp_to_NM_001142351,uc002tdq.2_5end | |||
|coexpression_cluster_id=C1878 | |||
|description=CAGE_peak_5_at_ST6GAL2_5end | |||
|id=chr2:107502615..107502628,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.50e-07;6!CL:0000404;5.50e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.74e-07,6;CL:0000031,5.74e-07,6;CL:0000404,5.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;5.50e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.43e-38!57;UBERON:0005068!6.43e-38!57;UBERON:0006241!6.43e-38!57;UBERON:0007135!6.43e-38!57;UBERON:0002616!7.85e-34!59;UBERON:0001017!3.44e-33!82;UBERON:0002346!3.78e-32!90;UBERON:0007023!1.83e-31!115;UBERON:0003075!5.51e-31!86;UBERON:0007284!5.51e-31!86;UBERON:0005743!7.16e-31!86;UBERON:0000955!2.04e-29!69;UBERON:0006238!2.04e-29!69;UBERON:0000073!5.23e-29!94;UBERON:0001016!5.23e-29!94;UBERON:0001893!4.06e-28!34;UBERON:0002020!5.07e-28!34;UBERON:0003528!5.07e-28!34;UBERON:0002780!1.19e-27!41;UBERON:0001890!1.19e-27!41;UBERON:0006240!1.19e-27!41;UBERON:0002791!5.11e-27!33;UBERON:0003080!9.56e-27!42;UBERON:0001869!3.84e-26!32;UBERON:0002619!1.33e-20!22;UBERON:0003056!2.21e-20!61;UBERON:0000956!3.70e-19!25;UBERON:0000203!3.70e-19!25;UBERON:0000924!4.05e-19!173;UBERON:0006601!4.05e-19!173;UBERON:0001950!2.56e-18!20;UBERON:0004121!4.51e-18!169;UBERON:0000153!1.29e-15!129;UBERON:0007811!1.29e-15!129;UBERON:0000033!1.74e-14!123;UBERON:0000025!7.79e-13!194;UBERON:0003076!3.65e-12!15;UBERON:0003057!3.65e-12!15;UBERON:0004733!9.50e-11!12;UBERON:0002028!9.50e-11!12;UBERON:0007277!9.50e-11!12;UBERON:0000119!1.80e-10!312;UBERON:0002308!1.81e-10!9;UBERON:0000125!1.81e-10!9;UBERON:0000483!7.17e-10!309;UBERON:0004732!1.02e-09!13;UBERON:0004111!2.32e-08!241;UBERON:0002420!2.50e-08!9;UBERON:0007245!2.50e-08!9;UBERON:0010009!2.50e-08!9;UBERON:0010011!2.50e-08!9;UBERON:0000454!2.50e-08!9;UBERON:0009663!2.99e-08!7;UBERON:0000481!4.17e-08!347;UBERON:0002680!5.24e-08!9;UBERON:0001895!5.24e-08!9;UBERON:0010092!5.24e-08!9;UBERON:0000064!1.07e-07!219;UBERON:0000477!1.35e-07!286;UBERON:0002021!1.90e-07!5;UBERON:0001872!1.93e-07!5;UBERON:0000922!3.77e-07!612;UBERON:0002298!6.97e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.59e-13;49!UBERON:0001950;9.54e-09;20!UBERON:0002050;3.20e-08;5!UBERON:0005423;3.20e-08;5!UBERON:0002780;4.22e-08;41!UBERON:0001890;4.22e-08;41!UBERON:0002619;6.69e-08;22!UBERON:0001893;1.03e-07;34!UBERON:0000956;7.07e-07;25!UBERON:0000203;7.07e-07;25!UBERON:0001869;7.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-11,81;UBERON:0002346,6.85e-11,86;UBERON:0001049,9.57e-11,56;UBERON:0005068,9.57e-11,56;UBERON:0006241,9.57e-11,56;UBERON:0007135,9.57e-11,56;UBERON:0001016,3.87e-10,89;UBERON:0000073,9.65e-10,53;UBERON:0002616,9.65e-10,53;UBERON:0002780,1.83e-09,41;UBERON:0001890,1.83e-09,41;UBERON:0003080,1.83e-09,41;UBERON:0006240,1.83e-09,41;UBERON:0003075,8.31e-09,82;UBERON:0007284,8.31e-09,82;UBERON:0001950,1.01e-08,20;UBERON:0010314,2.07e-08,132;UBERON:0010371,2.70e-08,104;UBERON:0000955,3.27e-08,68;UBERON:0006238,3.27e-08,68;UBERON:0002619,7.05e-08,22;UBERON:0004121,7.07e-08,171;UBERON:0000924,7.07e-08,171;UBERON:0006601,7.07e-08,171;UBERON:0001893,7.37e-08,34;UBERON:0003056,6.12e-07,61;UBERON:0000956,7.40e-07,25;UBERON:0000203,7.40e-07,25;UBERON:0002791,9.80e-07,32;UBERON:0001869,9.80e-07,32 | |||
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|short_description=p5@ST6GAL2 | |||
}} |
Revision as of 12:52, 12 September 2013
Short description: | p5@ST6GAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ST6GAL2_5end |
Coexpression cluster: | C1878_thyroid_aorta_temporal_occipital_throat_duodenum_brain |
Association with transcript: | -5bp_to_NM_001142351, uc002tdq.2_5end |
EntrezGene: | ST6GAL2 |
HGNC: | 10861 |
UniProt: | Q96JF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.74e-07 | 6 |
neuroblast | 5.74e-07 | 6 |
electrically signaling cell | 5.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.10e-11 | 81 |
neurectoderm | 6.85e-11 | 86 |
neural tube | 9.57e-11 | 56 |
neural rod | 9.57e-11 | 56 |
future spinal cord | 9.57e-11 | 56 |
neural keel | 9.57e-11 | 56 |
nervous system | 3.87e-10 | 89 |
regional part of nervous system | 9.65e-10 | 53 |
regional part of brain | 9.65e-10 | 53 |
regional part of forebrain | 1.83e-09 | 41 |
forebrain | 1.83e-09 | 41 |
anterior neural tube | 1.83e-09 | 41 |
future forebrain | 1.83e-09 | 41 |
neural plate | 8.31e-09 | 82 |
presumptive neural plate | 8.31e-09 | 82 |
neocortex | 1.01e-08 | 20 |
structure with developmental contribution from neural crest | 2.07e-08 | 132 |
ecto-epithelium | 2.70e-08 | 104 |
brain | 3.27e-08 | 68 |
future brain | 3.27e-08 | 68 |
regional part of cerebral cortex | 7.05e-08 | 22 |
ectoderm-derived structure | 7.07e-08 | 171 |
ectoderm | 7.07e-08 | 171 |
presumptive ectoderm | 7.07e-08 | 171 |
telencephalon | 7.37e-08 | 34 |
pre-chordal neural plate | 6.12e-07 | 61 |
cerebral cortex | 7.40e-07 | 25 |
pallium | 7.40e-07 | 25 |
regional part of telencephalon | 9.80e-07 | 32 |
cerebral hemisphere | 9.80e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.