FFCP PHASE1:Hg19::chr2:100652593..100652597,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:100652593..100652597,-|id=chr2:100652593..100652597,-|ontology_enrichment_celltype=CL:0000236!2.36e-14!14;CL:0000945!7.16e-11!24;CL:0000826!7.16e-11!24;CL:0000542!2.54e-07!53;CL:0000051!2.54e-07!53;CL:0000838!9.34e-07!52|ontology_enrichment_celltype_v019=CL:0000236;6.75e-51;13!CL:0000945;1.44e-43;24!CL:0000542;9.80e-15;53!CL:0000785;4.37e-07;1!CL:0000819;4.37e-07;1|ontology_enrichment_celltype_v019_2=CL:0000236,2.59e-47,14;CL:0000945,1.29e-43,24;CL:0000826,1.29e-43,24;CL:0000838,1.54e-18,52;CL:0000542,3.91e-18,53;CL:0000051,3.91e-18,53;CL:0000819,3.57e-07,1;CL:0002087,9.72e-07,115|ontology_enrichment_development_v019=CL:0000051;9.80e-15;53!UBERON:0003099;3.08e-07;1!UBERON:0003852;3.08e-07;1!UBERON:0000358;4.37e-07;1!UBERON:0005425;9.50e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;2.30e-09;10!DOID:0060073;4.37e-07;1!DOID:8675;4.37e-07;1|ontology_enrichment_disease_v019_2=DOID:0060058,2.49e-09,10;DOID:0060073,3.57e-07,1;DOID:8675,3.57e-07,1|ontology_enrichment_uberon=UBERON:0007023!6.66e-16!115;UBERON:0001049!2.94e-14!57;UBERON:0005068!2.94e-14!57;UBERON:0006241!2.94e-14!57;UBERON:0007135!2.94e-14!57;UBERON:0002616!2.10e-12!59;UBERON:0003075!3.64e-11!86;UBERON:0007284!3.64e-11!86;UBERON:0001893!7.64e-11!34;UBERON:0002780!8.46e-11!41;UBERON:0001890!8.46e-11!41;UBERON:0006240!8.46e-11!41;UBERON:0002346!9.94e-11!90;UBERON:0001869!1.16e-10!32;UBERON:0002020!1.20e-10!34;UBERON:0003528!1.20e-10!34;UBERON:0000073!1.72e-10!94;UBERON:0001016!1.72e-10!94;UBERON:0000955!1.97e-10!69;UBERON:0006238!1.97e-10!69;UBERON:0003080!2.31e-10!42;UBERON:0002791!3.37e-10!33;UBERON:0001950!7.00e-10!20;UBERON:0002619!7.66e-10!22;UBERON:0001017!3.64e-09!82;UBERON:0000956!4.16e-09!25;UBERON:0000203!4.16e-09!25;UBERON:0005743!6.74e-09!86;UBERON:0003056!4.98e-08!61|ontology_enrichment_uberon_v019=UBERON:0005705;3.08e-07;1!UBERON:0008193;3.08e-07;1!UBERON:0010912;3.08e-07;1!UBERON:0002514;3.08e-07;1!UBERON:0003457;3.08e-07;1!UBERON:0008907;3.08e-07;1!UBERON:0008001;3.08e-07;1!UBERON:0007213;3.08e-07;1!UBERON:0009891;3.08e-07;1!UBERON:0007914;3.08e-07;1!UBERON:0007375;3.08e-07;1!UBERON:0003323;3.08e-07;1!UBERON:0010258;3.08e-07;1!UBERON:0005253;3.08e-07;1!UBERON:0007842;3.08e-07;1!UBERON:0002397;3.08e-07;1!UBERON:0003113;3.08e-07;1!UBERON:0003277;3.08e-07;1!UBERON:0001709;3.08e-07;1!UBERON:0002244;3.08e-07;1!UBERON:0005620;3.08e-07;1!UBERON:0010364;3.08e-07;1!UBERON:0004288;3.08e-07;1!UBERON:0000922;4.48e-07;49!UBERON:0002134;9.50e-07;1!UBERON:0000941;9.50e-07;1!UBERON:0002171;9.50e-07;1!UBERON:0001785;9.50e-07;1!UBERON:0002464;9.50e-07;1!UBERON:0004904;9.50e-07;1!UBERON:0001021;9.50e-07;1!UBERON:0005208;9.50e-07;1!UBERON:0006518;9.50e-07;1!UBERON:0008949;9.50e-07;1!UBERON:0004145;9.50e-07;1!UBERON:0005946;9.50e-07;1!UBERON:0000101;9.50e-07;1!UBERON:0005965;9.50e-07;1!UBERON:0002167;9.50e-07;1!UBERON:0002078;9.50e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005705,2.82e-07,1;UBERON:0008193,2.82e-07,1;UBERON:0010912,2.82e-07,1;UBERON:0002514,2.82e-07,1;UBERON:0003457,2.82e-07,1;UBERON:0008907,2.82e-07,1;UBERON:0008001,2.82e-07,1;UBERON:0007213,2.82e-07,1;UBERON:0009891,2.82e-07,1;UBERON:0007914,2.82e-07,1;UBERON:0009292,2.82e-07,1;UBERON:0003099,2.82e-07,1;UBERON:0007375,2.82e-07,1;UBERON:0003323,2.82e-07,1;UBERON:0010258,2.82e-07,1;UBERON:0007842,2.82e-07,1;UBERON:0009494,2.82e-07,1;UBERON:0010042,2.82e-07,1;UBERON:0010045,2.82e-07,1;UBERON:0010259,2.82e-07,1;UBERON:0010359,2.82e-07,1;UBERON:0009526,2.82e-07,1;UBERON:0002397,2.82e-07,1;UBERON:0003113,2.82e-07,1;UBERON:0003277,2.82e-07,1;UBERON:0001709,2.82e-07,1;UBERON:0004066,2.82e-07,1;UBERON:0002244,2.82e-07,1;UBERON:0005620,2.82e-07,1;UBERON:0004362,2.82e-07,1;UBERON:0010364,2.82e-07,1;UBERON:0010046,2.82e-07,1;UBERON:0005868,2.82e-07,1;UBERON:0007238,2.82e-07,1;UBERON:0004288,2.82e-07,1;UBERON:0004068,2.82e-07,1;UBERON:0010334,2.82e-07,1;UBERON:0003852,2.82e-07,1;UBERON:0010253,2.82e-07,1;UBERON:0002134,7.15e-07,1;UBERON:0005208,7.15e-07,1;UBERON:0005946,7.15e-07,1;UBERON:0005965,7.15e-07,1;UBERON:0002078,7.15e-07,1;UBERON:0000941,8.02e-07,1;UBERON:0001785,8.02e-07,1;UBERON:0002464,8.02e-07,1;UBERON:0004904,8.02e-07,1;UBERON:0001021,8.02e-07,1;UBERON:0003902,8.02e-07,1;UBERON:0005425,8.02e-07,1|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,3.33108962495297,3.41206157969812,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0.182664153764634,3.51992488922645,1.63841583378639,0.889509253863555,9.81479511902967,2.00197993518006,1.72425731986345,1.32208974556972,2.86216126360609,5.12291672198504,1.17447437874188,7.6454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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:100652593..100652597,- | |||
|id=chr2:100652593..100652597,- | |||
|ontology_enrichment_celltype=CL:0000236!2.36e-14!14;CL:0000945!7.16e-11!24;CL:0000826!7.16e-11!24;CL:0000542!2.54e-07!53;CL:0000051!2.54e-07!53;CL:0000838!9.34e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.75e-51;13!CL:0000945;1.44e-43;24!CL:0000542;9.80e-15;53!CL:0000785;4.37e-07;1!CL:0000819;4.37e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.59e-47,14;CL:0000945,1.29e-43,24;CL:0000826,1.29e-43,24;CL:0000838,1.54e-18,52;CL:0000542,3.91e-18,53;CL:0000051,3.91e-18,53;CL:0000819,3.57e-07,1;CL:0002087,9.72e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;9.80e-15;53!UBERON:0003099;3.08e-07;1!UBERON:0003852;3.08e-07;1!UBERON:0000358;4.37e-07;1!UBERON:0005425;9.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.30e-09;10!DOID:0060073;4.37e-07;1!DOID:8675;4.37e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.49e-09,10;DOID:0060073,3.57e-07,1;DOID:8675,3.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.66e-16!115;UBERON:0001049!2.94e-14!57;UBERON:0005068!2.94e-14!57;UBERON:0006241!2.94e-14!57;UBERON:0007135!2.94e-14!57;UBERON:0002616!2.10e-12!59;UBERON:0003075!3.64e-11!86;UBERON:0007284!3.64e-11!86;UBERON:0001893!7.64e-11!34;UBERON:0002780!8.46e-11!41;UBERON:0001890!8.46e-11!41;UBERON:0006240!8.46e-11!41;UBERON:0002346!9.94e-11!90;UBERON:0001869!1.16e-10!32;UBERON:0002020!1.20e-10!34;UBERON:0003528!1.20e-10!34;UBERON:0000073!1.72e-10!94;UBERON:0001016!1.72e-10!94;UBERON:0000955!1.97e-10!69;UBERON:0006238!1.97e-10!69;UBERON:0003080!2.31e-10!42;UBERON:0002791!3.37e-10!33;UBERON:0001950!7.00e-10!20;UBERON:0002619!7.66e-10!22;UBERON:0001017!3.64e-09!82;UBERON:0000956!4.16e-09!25;UBERON:0000203!4.16e-09!25;UBERON:0005743!6.74e-09!86;UBERON:0003056!4.98e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;3.08e-07;1!UBERON:0008193;3.08e-07;1!UBERON:0010912;3.08e-07;1!UBERON:0002514;3.08e-07;1!UBERON:0003457;3.08e-07;1!UBERON:0008907;3.08e-07;1!UBERON:0008001;3.08e-07;1!UBERON:0007213;3.08e-07;1!UBERON:0009891;3.08e-07;1!UBERON:0007914;3.08e-07;1!UBERON:0007375;3.08e-07;1!UBERON:0003323;3.08e-07;1!UBERON:0010258;3.08e-07;1!UBERON:0005253;3.08e-07;1!UBERON:0007842;3.08e-07;1!UBERON:0002397;3.08e-07;1!UBERON:0003113;3.08e-07;1!UBERON:0003277;3.08e-07;1!UBERON:0001709;3.08e-07;1!UBERON:0002244;3.08e-07;1!UBERON:0005620;3.08e-07;1!UBERON:0010364;3.08e-07;1!UBERON:0004288;3.08e-07;1!UBERON:0000922;4.48e-07;49!UBERON:0002134;9.50e-07;1!UBERON:0000941;9.50e-07;1!UBERON:0002171;9.50e-07;1!UBERON:0001785;9.50e-07;1!UBERON:0002464;9.50e-07;1!UBERON:0004904;9.50e-07;1!UBERON:0001021;9.50e-07;1!UBERON:0005208;9.50e-07;1!UBERON:0006518;9.50e-07;1!UBERON:0008949;9.50e-07;1!UBERON:0004145;9.50e-07;1!UBERON:0005946;9.50e-07;1!UBERON:0000101;9.50e-07;1!UBERON:0005965;9.50e-07;1!UBERON:0002167;9.50e-07;1!UBERON:0002078;9.50e-07;1 | |||
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| |||
|short_description=p@chr2:100652593..100652597,- | |||
}} |
Revision as of 12:38, 12 September 2013
Short description: | p@chr2:100652593..100652597, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:100652593..100652597, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.59e-47 | 14 |
lymphocyte of B lineage | 1.29e-43 | 24 |
pro-B cell | 1.29e-43 | 24 |
lymphoid lineage restricted progenitor cell | 1.54e-18 | 52 |
lymphocyte | 3.91e-18 | 53 |
common lymphoid progenitor | 3.91e-18 | 53 |
B-1 B cell | 3.57e-07 | 1 |
nongranular leukocyte | 9.72e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.49e-09 | 10 |
lymphatic system cancer | 3.57e-07 | 1 |
lymphosarcoma | 3.57e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.