FFCP PHASE1:Hg19::chr22:44568774..44568807,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64098|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14654|TSSclassifier=S|UniProt=Q9HBI0|association_with_transcript=-28bp_to_ENST00000422871,NM_001137605,NM_001254742,NR_024427,uc010gzo.2,uc011aqe.1_5end|description=CAGE_peak_10_at_PARVG_5end|id=chr22:44568774..44568807,+|ontology_enrichment_celltype=CL:0000763!9.55e-46!112;CL:0000049!9.55e-46!112;CL:0002009!1.36e-40!65;CL:0000557!1.39e-39!71;CL:0002194!2.74e-38!63;CL:0000576!2.74e-38!63;CL:0000040!2.74e-38!63;CL:0000559!2.74e-38!63;CL:0000766!9.68e-38!76;CL:0000839!1.73e-34!70;CL:0000037!2.08e-34!172;CL:0000566!2.08e-34!172;CL:0000988!3.41e-31!182;CL:0002032!1.55e-30!165;CL:0000837!1.55e-30!165;CL:0002057!8.70e-27!42;CL:0000738!9.62e-25!140;CL:0000860!2.62e-24!45;CL:0002087!2.31e-22!119;CL:0002031!1.21e-20!124;CL:0000134!2.75e-08!358;CL:0002320!9.57e-08!365;CL:0002393!2.42e-07!9;CL:0002397!2.42e-07!9|ontology_enrichment_celltype_v019=CL:0000235;2.61e-28;6!CL:0000763;7.01e-16;100!CL:0000473;2.81e-10;39!CL:0000234;2.81e-10;39!CL:0002619;7.81e-10;3!CL:0000576;9.68e-09;48!CL:0000766;9.88e-09;69!CL:0002032;1.05e-08;1!CL:0000557;1.05e-08;1!CL:0000037;3.33e-08;1!CL:0001024;3.33e-08;1|ontology_enrichment_celltype_v019_2=CL:0000763,2.40e-38,108;CL:0000049,2.40e-38,108;CL:0000235,3.58e-28,6;CL:0000037,3.07e-25,168;CL:0002032,2.46e-24,161;CL:0000837,2.46e-24,161;CL:0000988,9.89e-24,177;CL:0000557,1.60e-22,67;CL:0002194,1.62e-22,59;CL:0000576,1.62e-22,59;CL:0000040,1.62e-22,59;CL:0000559,1.62e-22,59;CL:0002009,1.07e-21,61;CL:0000766,1.23e-20,72;CL:0000839,7.28e-20,66;CL:0000473,2.24e-12,48;CL:0000234,2.24e-12,48;CL:0002087,2.90e-10,115;CL:0002619,6.22e-10,3;CL:0002031,1.01e-09,120;CL:0000738,1.47e-09,136;CL:0000134,1.56e-09,354;CL:0002320,2.96e-09,361;CL:0000219,2.85e-08,386;CL:0001024,3.83e-08,1;CL:0000034,1.58e-07,441;CL:0000048,4.58e-07,427;CL:0000723,6.72e-07,433|ontology_enrichment_development_v019=CL:0000049;4.70e-13;108|ontology_enrichment_disease=DOID:8692!2.10e-11!31;DOID:1240!4.86e-08!39|ontology_enrichment_disease_v019=DOID:8692;1.26e-29;31!DOID:1240;5.71e-20;39!DOID:2531;4.71e-10;51!DOID:0060083;4.71e-10;51!DOID:225;1.13e-08;1|ontology_enrichment_disease_v019_2=DOID:8692,1.28e-30,31;DOID:1240,6.92e-24,39;DOID:2531,9.65e-18,51;DOID:0060083,9.65e-18,51;DOID:225,1.13e-08,1|ontology_enrichment_uberon=UBERON:0002390!2.82e-39!102;UBERON:0003061!2.82e-39!102;UBERON:0002193!2.94e-35!112;UBERON:0002371!3.56e-35!80;UBERON:0001474!1.72e-34!86;UBERON:0004765!6.97e-27!101;UBERON:0001434!6.97e-27!101;UBERON:0002405!1.58e-24!115;UBERON:0002204!1.04e-12!167;UBERON:0003081!1.89e-11!216;UBERON:0002384!2.03e-07!375;UBERON:0007023!8.37e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.09e-22,76;UBERON:0001474,2.16e-20,82;UBERON:0004765,2.61e-18,90;UBERON:0002405,1.28e-17,93;UBERON:0002390,1.46e-16,98;UBERON:0003061,1.46e-16,98;UBERON:0001434,3.60e-16,100;UBERON:0002193,9.67e-15,108;UBERON:0002384,7.11e-09,371;UBERON:0002204,2.06e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,0,0,2.34880351467878,0.553995408531877,0.401088894940283,0.434021741431704,0.671746422719773,1.29557466407592,1.80302897343931,0.436194716338694,0.377875943688809,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0.752969358170419,0.545812300115692,0.224723484445085,0,0.962787081228281,2.55734850319616,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,1.0429658368404,0.65156653411535,0.605399502633369,0,0.316462387440884,0.211255286311942,0.212604299965044,1.04829322754188,1.79725809834392,2.4028302854641,0.803627933485401,0,0,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,4.21414535640123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.664789802594326,0.476981248610684,0,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,1.17002132569619,0.743155811443641,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.00451418286425,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |||
|TSSclassifier=S | |||
|UniProt=Q9HBI0 | |||
|association_with_transcript=-28bp_to_ENST00000422871,NM_001137605,NM_001254742,NR_024427,uc010gzo.2,uc011aqe.1_5end | |||
|description=CAGE_peak_10_at_PARVG_5end | |||
|id=chr22:44568774..44568807,+ | |||
|ontology_enrichment_celltype=CL:0000763!9.55e-46!112;CL:0000049!9.55e-46!112;CL:0002009!1.36e-40!65;CL:0000557!1.39e-39!71;CL:0002194!2.74e-38!63;CL:0000576!2.74e-38!63;CL:0000040!2.74e-38!63;CL:0000559!2.74e-38!63;CL:0000766!9.68e-38!76;CL:0000839!1.73e-34!70;CL:0000037!2.08e-34!172;CL:0000566!2.08e-34!172;CL:0000988!3.41e-31!182;CL:0002032!1.55e-30!165;CL:0000837!1.55e-30!165;CL:0002057!8.70e-27!42;CL:0000738!9.62e-25!140;CL:0000860!2.62e-24!45;CL:0002087!2.31e-22!119;CL:0002031!1.21e-20!124;CL:0000134!2.75e-08!358;CL:0002320!9.57e-08!365;CL:0002393!2.42e-07!9;CL:0002397!2.42e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.61e-28;6!CL:0000763;7.01e-16;100!CL:0000473;2.81e-10;39!CL:0000234;2.81e-10;39!CL:0002619;7.81e-10;3!CL:0000576;9.68e-09;48!CL:0000766;9.88e-09;69!CL:0002032;1.05e-08;1!CL:0000557;1.05e-08;1!CL:0000037;3.33e-08;1!CL:0001024;3.33e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.40e-38,108;CL:0000049,2.40e-38,108;CL:0000235,3.58e-28,6;CL:0000037,3.07e-25,168;CL:0002032,2.46e-24,161;CL:0000837,2.46e-24,161;CL:0000988,9.89e-24,177;CL:0000557,1.60e-22,67;CL:0002194,1.62e-22,59;CL:0000576,1.62e-22,59;CL:0000040,1.62e-22,59;CL:0000559,1.62e-22,59;CL:0002009,1.07e-21,61;CL:0000766,1.23e-20,72;CL:0000839,7.28e-20,66;CL:0000473,2.24e-12,48;CL:0000234,2.24e-12,48;CL:0002087,2.90e-10,115;CL:0002619,6.22e-10,3;CL:0002031,1.01e-09,120;CL:0000738,1.47e-09,136;CL:0000134,1.56e-09,354;CL:0002320,2.96e-09,361;CL:0000219,2.85e-08,386;CL:0001024,3.83e-08,1;CL:0000034,1.58e-07,441;CL:0000048,4.58e-07,427;CL:0000723,6.72e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000049;4.70e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!2.10e-11!31;DOID:1240!4.86e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.26e-29;31!DOID:1240;5.71e-20;39!DOID:2531;4.71e-10;51!DOID:0060083;4.71e-10;51!DOID:225;1.13e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.28e-30,31;DOID:1240,6.92e-24,39;DOID:2531,9.65e-18,51;DOID:0060083,9.65e-18,51;DOID:225,1.13e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.82e-39!102;UBERON:0003061!2.82e-39!102;UBERON:0002193!2.94e-35!112;UBERON:0002371!3.56e-35!80;UBERON:0001474!1.72e-34!86;UBERON:0004765!6.97e-27!101;UBERON:0001434!6.97e-27!101;UBERON:0002405!1.58e-24!115;UBERON:0002204!1.04e-12!167;UBERON:0003081!1.89e-11!216;UBERON:0002384!2.03e-07!375;UBERON:0007023!8.37e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.09e-22,76;UBERON:0001474,2.16e-20,82;UBERON:0004765,2.61e-18,90;UBERON:0002405,1.28e-17,93;UBERON:0002390,1.46e-16,98;UBERON:0003061,1.46e-16,98;UBERON:0001434,3.60e-16,100;UBERON:0002193,9.67e-15,108;UBERON:0002384,7.11e-09,371;UBERON:0002204,2.06e-08,167 | |||
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|short_description=p10@PARVG | |||
}} |
Revision as of 12:19, 12 September 2013
Short description: | p10@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PARVG_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000422871, NM_001137605, NM_001254742, NR_024427, uc010gzo.2, uc011aqe.1_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | Q9HBI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.40e-38 | 108 |
common myeloid progenitor | 2.40e-38 | 108 |
macrophage | 3.58e-28 | 6 |
hematopoietic stem cell | 3.07e-25 | 168 |
hematopoietic oligopotent progenitor cell | 2.46e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.46e-24 | 161 |
hematopoietic cell | 9.89e-24 | 177 |
granulocyte monocyte progenitor cell | 1.60e-22 | 67 |
monopoietic cell | 1.62e-22 | 59 |
monocyte | 1.62e-22 | 59 |
monoblast | 1.62e-22 | 59 |
promonocyte | 1.62e-22 | 59 |
macrophage dendritic cell progenitor | 1.07e-21 | 61 |
myeloid leukocyte | 1.23e-20 | 72 |
myeloid lineage restricted progenitor cell | 7.28e-20 | 66 |
defensive cell | 2.24e-12 | 48 |
phagocyte | 2.24e-12 | 48 |
nongranular leukocyte | 2.90e-10 | 115 |
adult endothelial progenitor cell | 6.22e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 1.01e-09 | 120 |
leukocyte | 1.47e-09 | 136 |
mesenchymal cell | 1.56e-09 | 354 |
connective tissue cell | 2.96e-09 | 361 |
motile cell | 2.85e-08 | 386 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.83e-08 | 1 |
stem cell | 1.58e-07 | 441 |
multi fate stem cell | 4.58e-07 | 427 |
somatic stem cell | 6.72e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.09e-22 | 76 |
bone element | 2.16e-20 | 82 |
skeletal element | 2.61e-18 | 90 |
immune system | 1.28e-17 | 93 |
hematopoietic system | 1.46e-16 | 98 |
blood island | 1.46e-16 | 98 |
skeletal system | 3.60e-16 | 100 |
hemolymphoid system | 9.67e-15 | 108 |
connective tissue | 7.11e-09 | 371 |
musculoskeletal system | 2.06e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.28e-30 | 31 |
leukemia | 6.92e-24 | 39 |
hematologic cancer | 9.65e-18 | 51 |
immune system cancer | 9.65e-18 | 51 |
syndrome | 1.13e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.