FFCP PHASE1:Hg19::chr22:37628041..37628050,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5880|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9802|TSSclassifier=N|UniProt=|association_with_transcript=-498bp_to_ENST00000481215_5end|description=CAGE_peak_25_at_RAC2_5end|id=chr22:37628041..37628050,-|ontology_enrichment_celltype=CL:0000766!4.06e-18!76;CL:0002274!1.69e-17!5;CL:0000457!1.69e-17!5;CL:0002191!1.69e-17!5;CL:0000097!1.69e-17!5;CL:0000831!1.69e-17!5;CL:0002028!1.69e-17!5;CL:0000738!4.30e-16!140;CL:0000763!5.26e-15!112;CL:0000049!5.26e-15!112;CL:0000037!1.37e-14!172;CL:0000566!1.37e-14!172;CL:0000988!2.82e-14!182;CL:0002032!1.79e-13!165;CL:0000837!1.79e-13!165;CL:0000163!2.27e-13!9;CL:0000839!4.29e-13!70;CL:0000557!7.67e-13!71;CL:0000775!3.44e-11!3;CL:0002031!1.58e-10!124;CL:0002057!3.66e-08!42;CL:0002087!6.70e-08!119;CL:0002194!1.42e-07!63;CL:0000576!1.42e-07!63;CL:0000040!1.42e-07!63;CL:0000559!1.42e-07!63;CL:0000860!1.88e-07!45;CL:0002009!3.03e-07!65;CL:0000094!5.40e-07!8|ontology_enrichment_celltype_v019=CL:0000097;1.57e-32;5!CL:0000163;1.29e-18;9!CL:0000775;1.31e-14;3!CL:0000307;1.83e-14;3|ontology_enrichment_celltype_v019_2=CL:0000097,1.44e-32,5;CL:0002028,1.44e-32,5;CL:0000163,1.24e-18,9;CL:0000775,1.22e-14,3;CL:0000068,1.83e-14,3;CL:0000069,1.83e-14,3;CL:0000307,1.83e-14,3;CL:0000377,1.83e-14,3|ontology_enrichment_development_v019=CL:0000377;1.83e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.15e-16!102;UBERON:0003061!1.15e-16!102;UBERON:0002193!1.49e-14!112;UBERON:0002371!7.40e-11!80;UBERON:0001474!9.04e-10!86;UBERON:0002405!1.49e-09!115;UBERON:0004765!1.23e-07!101;UBERON:0001434!1.23e-07!101;UBERON:0003081!8.58e-07!216|ontology_enrichment_uberon_v019=UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,1.47798971368783,0.792435906119034,0.829312462163088,0.720599767084807,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p25@RAC2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5880 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9802 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-498bp_to_ENST00000481215_5end | |||
|description=CAGE_peak_25_at_RAC2_5end | |||
|id=chr22:37628041..37628050,- | |||
|ontology_enrichment_celltype=CL:0000766!4.06e-18!76;CL:0002274!1.69e-17!5;CL:0000457!1.69e-17!5;CL:0002191!1.69e-17!5;CL:0000097!1.69e-17!5;CL:0000831!1.69e-17!5;CL:0002028!1.69e-17!5;CL:0000738!4.30e-16!140;CL:0000763!5.26e-15!112;CL:0000049!5.26e-15!112;CL:0000037!1.37e-14!172;CL:0000566!1.37e-14!172;CL:0000988!2.82e-14!182;CL:0002032!1.79e-13!165;CL:0000837!1.79e-13!165;CL:0000163!2.27e-13!9;CL:0000839!4.29e-13!70;CL:0000557!7.67e-13!71;CL:0000775!3.44e-11!3;CL:0002031!1.58e-10!124;CL:0002057!3.66e-08!42;CL:0002087!6.70e-08!119;CL:0002194!1.42e-07!63;CL:0000576!1.42e-07!63;CL:0000040!1.42e-07!63;CL:0000559!1.42e-07!63;CL:0000860!1.88e-07!45;CL:0002009!3.03e-07!65;CL:0000094!5.40e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.57e-32;5!CL:0000163;1.29e-18;9!CL:0000775;1.31e-14;3!CL:0000307;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.44e-32,5;CL:0002028,1.44e-32,5;CL:0000163,1.24e-18,9;CL:0000775,1.22e-14,3;CL:0000068,1.83e-14,3;CL:0000069,1.83e-14,3;CL:0000307,1.83e-14,3;CL:0000377,1.83e-14,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.83e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-16!102;UBERON:0003061!1.15e-16!102;UBERON:0002193!1.49e-14!112;UBERON:0002371!7.40e-11!80;UBERON:0001474!9.04e-10!86;UBERON:0002405!1.49e-09!115;UBERON:0004765!1.23e-07!101;UBERON:0001434!1.23e-07!101;UBERON:0003081!8.58e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,1.47798971368783,0.792435906119034,0.829312462163088,0.720599767084807,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p25@RAC2 | |||
}} |
Revision as of 11:50, 12 September 2013
Short description: | p25@RAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_RAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -498bp_to_ENST00000481215_5end |
EntrezGene: | RAC2 |
HGNC: | 9802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.44e-32 | 5 |
basophil mast progenitor cell | 1.44e-32 | 5 |
endocrine cell | 1.24e-18 | 9 |
neutrophil | 1.22e-14 | 3 |
duct epithelial cell | 1.83e-14 | 3 |
branched duct epithelial cell | 1.83e-14 | 3 |
tracheal epithelial cell | 1.83e-14 | 3 |
tracheoblast | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.04e-07 | 7 |
respiratory airway | 6.04e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.