FFCP PHASE1:Hg19::chr22:32352552..32352569,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7533|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=12853|TSSclassifier=N|UniProt=Q9H4N8|association_with_transcript=341bp_to_AY007132_5end|description=CAGE_peak_12_at_YWHAH_5end|id=chr22:32352552..32352569,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;9.60e-07;6!CL:0000404;9.60e-07;6|ontology_enrichment_celltype_v019_2=CL:0000540,8.74e-07,6;CL:0000031,8.74e-07,6;CL:0000404,8.74e-07,6|ontology_enrichment_development_v019=CL:0000031;9.60e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.86e-11!82;UBERON:0005743!1.30e-10!86;UBERON:0001049!1.64e-10!57;UBERON:0005068!1.64e-10!57;UBERON:0006241!1.64e-10!57;UBERON:0007135!1.64e-10!57;UBERON:0002619!3.02e-10!22;UBERON:0001893!4.42e-10!34;UBERON:0001869!5.61e-10!32;UBERON:0002791!1.10e-09!33;UBERON:0001950!1.94e-09!20;UBERON:0000956!2.51e-09!25;UBERON:0000203!2.51e-09!25;UBERON:0002020!3.97e-09!34;UBERON:0003528!3.97e-09!34;UBERON:0002616!1.34e-08!59;UBERON:0000073!1.82e-08!94;UBERON:0001016!1.82e-08!94;UBERON:0000955!2.46e-08!69;UBERON:0006238!2.46e-08!69;UBERON:0003080!2.99e-08!42;UBERON:0007023!6.12e-08!115;UBERON:0002780!7.84e-08!41;UBERON:0001890!7.84e-08!41;UBERON:0006240!7.84e-08!41|ontology_enrichment_uberon_v019=UBERON:0001950;1.53e-21;20!UBERON:0002619;1.82e-19;22!UBERON:0000956;5.95e-17;25!UBERON:0000203;5.95e-17;25!UBERON:0001869;3.59e-12;32!UBERON:0002791;9.43e-12;32!UBERON:0001893;1.26e-10;34!UBERON:0003528;1.43e-10;34!UBERON:0002020;1.43e-10;34!UBERON:0002702;2.57e-09;2!UBERON:0001872;6.20e-08;5!UBERON:0000073;3.30e-07;53!UBERON:0002616;3.30e-07;53!UBERON:0000200;6.25e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.09e-22,20;UBERON:0002619,7.90e-20,22;UBERON:0000956,2.86e-17,25;UBERON:0000203,2.86e-17,25;UBERON:0001017,2.79e-15,81;UBERON:0001016,2.58e-13,89;UBERON:0002791,4.11e-13,32;UBERON:0001869,4.11e-13,32;UBERON:0003528,3.12e-12,34;UBERON:0002020,3.12e-12,34;UBERON:0001893,3.12e-12,34;UBERON:0001049,3.73e-11,56;UBERON:0005068,3.73e-11,56;UBERON:0006241,3.73e-11,56;UBERON:0007135,3.73e-11,56;UBERON:0000073,3.12e-10,53;UBERON:0002616,3.12e-10,53;UBERON:0000955,4.87e-10,68;UBERON:0006238,4.87e-10,68;UBERON:0002780,8.14e-10,41;UBERON:0001890,8.14e-10,41;UBERON:0003080,8.14e-10,41;UBERON:0006240,8.14e-10,41;UBERON:0002702,2.43e-09,2;UBERON:0001872,4.67e-08,5;UBERON:0007023,1.56e-07,114;UBERON:0000200,6.22e-07,6|phase1_expression=0.363356758541113,1.71280419112787,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0.273748850145768,0.125542639594803,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,1.01778767145695,2.26725566213286,0.485168122375632,0.232429036905685,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0.941211697713023,0,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0.589211814949674,0.221533894583621,0,0.384273959177026,0,0.493313713811028,0.829050053357545,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0.434539556882471,0,0,0,0.665188192387692,0.087834785693126,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.835979866147242,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0.535798369704479,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0.808264032418128,0.163461903113459,0.302714855289863,0,0,0,0,0.298897361103602,0.352303495931295,0.809364721840658,0.421352420106746,0,1.10550885580591,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.453728732640084,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.292311015483596,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.169560592310488,0.386521706326594,0,0.286804595389004,0.487894824518382,0.662648841607426,0.813357600086629,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0.928735856063958,0,0.473227200159376,0.674338760312407,0.723033089650446,0.55146986366197,0.217879444092406,0,0.404493924480493,0.196221465125346,1.15424147083917,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0.858486162094873,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0.432359860250884,0.37872730027914,0.06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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12853 | |||
|TSSclassifier=N | |||
|UniProt=Q9H4N8 | |||
|association_with_transcript=341bp_to_AY007132_5end | |||
|description=CAGE_peak_12_at_YWHAH_5end | |||
|id=chr22:32352552..32352569,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.60e-07;6!CL:0000404;9.60e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.74e-07,6;CL:0000031,8.74e-07,6;CL:0000404,8.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;9.60e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.86e-11!82;UBERON:0005743!1.30e-10!86;UBERON:0001049!1.64e-10!57;UBERON:0005068!1.64e-10!57;UBERON:0006241!1.64e-10!57;UBERON:0007135!1.64e-10!57;UBERON:0002619!3.02e-10!22;UBERON:0001893!4.42e-10!34;UBERON:0001869!5.61e-10!32;UBERON:0002791!1.10e-09!33;UBERON:0001950!1.94e-09!20;UBERON:0000956!2.51e-09!25;UBERON:0000203!2.51e-09!25;UBERON:0002020!3.97e-09!34;UBERON:0003528!3.97e-09!34;UBERON:0002616!1.34e-08!59;UBERON:0000073!1.82e-08!94;UBERON:0001016!1.82e-08!94;UBERON:0000955!2.46e-08!69;UBERON:0006238!2.46e-08!69;UBERON:0003080!2.99e-08!42;UBERON:0007023!6.12e-08!115;UBERON:0002780!7.84e-08!41;UBERON:0001890!7.84e-08!41;UBERON:0006240!7.84e-08!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.53e-21;20!UBERON:0002619;1.82e-19;22!UBERON:0000956;5.95e-17;25!UBERON:0000203;5.95e-17;25!UBERON:0001869;3.59e-12;32!UBERON:0002791;9.43e-12;32!UBERON:0001893;1.26e-10;34!UBERON:0003528;1.43e-10;34!UBERON:0002020;1.43e-10;34!UBERON:0002702;2.57e-09;2!UBERON:0001872;6.20e-08;5!UBERON:0000073;3.30e-07;53!UBERON:0002616;3.30e-07;53!UBERON:0000200;6.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.09e-22,20;UBERON:0002619,7.90e-20,22;UBERON:0000956,2.86e-17,25;UBERON:0000203,2.86e-17,25;UBERON:0001017,2.79e-15,81;UBERON:0001016,2.58e-13,89;UBERON:0002791,4.11e-13,32;UBERON:0001869,4.11e-13,32;UBERON:0003528,3.12e-12,34;UBERON:0002020,3.12e-12,34;UBERON:0001893,3.12e-12,34;UBERON:0001049,3.73e-11,56;UBERON:0005068,3.73e-11,56;UBERON:0006241,3.73e-11,56;UBERON:0007135,3.73e-11,56;UBERON:0000073,3.12e-10,53;UBERON:0002616,3.12e-10,53;UBERON:0000955,4.87e-10,68;UBERON:0006238,4.87e-10,68;UBERON:0002780,8.14e-10,41;UBERON:0001890,8.14e-10,41;UBERON:0003080,8.14e-10,41;UBERON:0006240,8.14e-10,41;UBERON:0002702,2.43e-09,2;UBERON:0001872,4.67e-08,5;UBERON:0007023,1.56e-07,114;UBERON:0000200,6.22e-07,6 | |||
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| |||
|short_description=p12@YWHAH | |||
}} |
Revision as of 11:36, 12 September 2013
Short description: | p12@YWHAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_YWHAH_5end |
Coexpression cluster: | NA |
Association with transcript: | 341bp_to_AY007132_5end |
EntrezGene: | YWHAH |
HGNC: | 12853 |
UniProt: | Q9H4N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.74e-07 | 6 |
neuroblast | 8.74e-07 | 6 |
electrically signaling cell | 8.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 6.09e-22 | 20 |
regional part of cerebral cortex | 7.90e-20 | 22 |
cerebral cortex | 2.86e-17 | 25 |
pallium | 2.86e-17 | 25 |
central nervous system | 2.79e-15 | 81 |
nervous system | 2.58e-13 | 89 |
regional part of telencephalon | 4.11e-13 | 32 |
cerebral hemisphere | 4.11e-13 | 32 |
brain grey matter | 3.12e-12 | 34 |
gray matter | 3.12e-12 | 34 |
telencephalon | 3.12e-12 | 34 |
neural tube | 3.73e-11 | 56 |
neural rod | 3.73e-11 | 56 |
future spinal cord | 3.73e-11 | 56 |
neural keel | 3.73e-11 | 56 |
regional part of nervous system | 3.12e-10 | 53 |
regional part of brain | 3.12e-10 | 53 |
brain | 4.87e-10 | 68 |
future brain | 4.87e-10 | 68 |
regional part of forebrain | 8.14e-10 | 41 |
forebrain | 8.14e-10 | 41 |
anterior neural tube | 8.14e-10 | 41 |
future forebrain | 8.14e-10 | 41 |
middle frontal gyrus | 2.43e-09 | 2 |
parietal lobe | 4.67e-08 | 5 |
adult organism | 1.56e-07 | 114 |
gyrus | 6.22e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.