FFCP PHASE1:Hg19::chr22:30639955..30639992,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr22:30639955..30639992,-|id=chr22:30639955..30639992,-|ontology_enrichment_celltype=CL:0002274!3.45e-10!5;CL:0000457!3.45e-10!5;CL:0002191!3.45e-10!5;CL:0000097!3.45e-10!5;CL:0000831!3.45e-10!5;CL:0002028!3.45e-10!5;CL:0000359!3.63e-10!32;CL:0000192!1.26e-08!42;CL:0000514!1.26e-08!42;CL:0000680!1.85e-07!57;CL:0000056!1.85e-07!57;CL:0000355!1.85e-07!57|ontology_enrichment_celltype_v019=CL:0000097;9.96e-53;5!CL:0000163;2.41e-29;9!CL:0002379;1.01e-11;1!CL:0002595;1.39e-09;5!CL:0000151;8.35e-07;36!CL:0002593;9.96e-07;2|ontology_enrichment_celltype_v019_2=CL:0000097,5.27e-53,5;CL:0002028,5.27e-53,5;CL:0000163,1.70e-29,9;CL:0002379,6.26e-12,1;CL:0002595,1.42e-09,5;CL:0000839,3.15e-09,66;CL:0000557,4.44e-09,67;CL:0000766,2.16e-08,72;CL:0000151,2.61e-07,36;CL:0002593,9.96e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!1.84e-12!14;DOID:120!2.08e-07!27|ontology_enrichment_disease_v019=DOID:3620;1.01e-11;1!DOID:3565;1.01e-11;1|ontology_enrichment_disease_v019_2=DOID:3620,6.26e-12,1;DOID:3565,6.26e-12,1|ontology_enrichment_uberon=UBERON:0001637!7.66e-09!42;UBERON:0003509!7.66e-09!42;UBERON:0004572!7.66e-09!42;UBERON:0004573!1.99e-08!33;UBERON:0004571!1.99e-08!33;UBERON:0002118!3.49e-08!5;UBERON:0004532!3.49e-08!5;UBERON:0000992!5.95e-07!13;UBERON:0002385!6.55e-07!63;UBERON:0001015!6.55e-07!63;UBERON:0000383!6.55e-07!63|ontology_enrichment_uberon_v019=UBERON:0002134;1.01e-11;1!UBERON:0005208;1.01e-11;1!UBERON:0004145;1.01e-11;1!UBERON:0005946;1.01e-11;1!UBERON:0005965;1.01e-11;1!UBERON:0002078;1.01e-11;1!UBERON:0003834;1.39e-09;5!UBERON:0001533;1.39e-09;5!UBERON:0003513;4.39e-07;7!UBERON:0002456;9.96e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002134,7.76e-12,1;UBERON:0005208,7.76e-12,1;UBERON:0005946,7.76e-12,1;UBERON:0005965,7.76e-12,1;UBERON:0002078,7.76e-12,1;UBERON:0002371,5.44e-10,76;UBERON:0003834,1.42e-09,5;UBERON:0001533,1.42e-09,5;UBERON:0001474,3.50e-09,82;UBERON:0004765,2.85e-08,90;UBERON:0002405,5.72e-08,93;UBERON:0002390,1.66e-07,98;UBERON:0003061,1.66e-07,98;UBERON:0001434,2.47e-07,100;UBERON:0003513,4.46e-07,7;UBERON:0003081,8.34e-07,203;UBERON:0002456,9.96e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,1.93645405075148,4.06279459783025,0.188242339542605,0,0,0.306083892370903,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668462741311041,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,1.40877494421162,5.59785911960085,2.73827911492227,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0.845302752556,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0.871533458600294,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.164254312027618,1.03850885836724,0,0,0.200506470303285,0,0,0.182091168006717,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0.330569830721956,0,0,0.10115778085555,0.929691098594572,0.94443704049192,0.6970372701606,0,0,0,0.55597265731176,0.715624433709956,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0.731140468893853,3.16950440270266,0.136499911407986,0.282810863907425,0,0,0,2.63070531152258,0,0,0.811641507850816,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.568272293612826,0,0,0,0,0,0.779160935160341,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr22:30639955..30639992,- | |||
|id=chr22:30639955..30639992,- | |||
|ontology_enrichment_celltype=CL:0002274!3.45e-10!5;CL:0000457!3.45e-10!5;CL:0002191!3.45e-10!5;CL:0000097!3.45e-10!5;CL:0000831!3.45e-10!5;CL:0002028!3.45e-10!5;CL:0000359!3.63e-10!32;CL:0000192!1.26e-08!42;CL:0000514!1.26e-08!42;CL:0000680!1.85e-07!57;CL:0000056!1.85e-07!57;CL:0000355!1.85e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.96e-53;5!CL:0000163;2.41e-29;9!CL:0002379;1.01e-11;1!CL:0002595;1.39e-09;5!CL:0000151;8.35e-07;36!CL:0002593;9.96e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.27e-53,5;CL:0002028,5.27e-53,5;CL:0000163,1.70e-29,9;CL:0002379,6.26e-12,1;CL:0002595,1.42e-09,5;CL:0000839,3.15e-09,66;CL:0000557,4.44e-09,67;CL:0000766,2.16e-08,72;CL:0000151,2.61e-07,36;CL:0002593,9.96e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.84e-12!14;DOID:120!2.08e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:3620;1.01e-11;1!DOID:3565;1.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,6.26e-12,1;DOID:3565,6.26e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!7.66e-09!42;UBERON:0003509!7.66e-09!42;UBERON:0004572!7.66e-09!42;UBERON:0004573!1.99e-08!33;UBERON:0004571!1.99e-08!33;UBERON:0002118!3.49e-08!5;UBERON:0004532!3.49e-08!5;UBERON:0000992!5.95e-07!13;UBERON:0002385!6.55e-07!63;UBERON:0001015!6.55e-07!63;UBERON:0000383!6.55e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.01e-11;1!UBERON:0005208;1.01e-11;1!UBERON:0004145;1.01e-11;1!UBERON:0005946;1.01e-11;1!UBERON:0005965;1.01e-11;1!UBERON:0002078;1.01e-11;1!UBERON:0003834;1.39e-09;5!UBERON:0001533;1.39e-09;5!UBERON:0003513;4.39e-07;7!UBERON:0002456;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,7.76e-12,1;UBERON:0005208,7.76e-12,1;UBERON:0005946,7.76e-12,1;UBERON:0005965,7.76e-12,1;UBERON:0002078,7.76e-12,1;UBERON:0002371,5.44e-10,76;UBERON:0003834,1.42e-09,5;UBERON:0001533,1.42e-09,5;UBERON:0001474,3.50e-09,82;UBERON:0004765,2.85e-08,90;UBERON:0002405,5.72e-08,93;UBERON:0002390,1.66e-07,98;UBERON:0003061,1.66e-07,98;UBERON:0001434,2.47e-07,100;UBERON:0003513,4.46e-07,7;UBERON:0003081,8.34e-07,203;UBERON:0002456,9.96e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,1.93645405075148,4.06279459783025,0.188242339542605,0,0,0.306083892370903,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668462741311041,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,1.40877494421162,5.59785911960085,2.73827911492227,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0.845302752556,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0.871533458600294,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.164254312027618,1.03850885836724,0,0,0.200506470303285,0,0,0.182091168006717,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0.330569830721956,0,0,0.10115778085555,0.929691098594572,0.94443704049192,0.6970372701606,0,0,0,0.55597265731176,0.715624433709956,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0.731140468893853,3.16950440270266,0.136499911407986,0.282810863907425,0,0,0,2.63070531152258,0,0,0.811641507850816,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.568272293612826,0,0,0,0,0,0.779160935160341,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0.653174720218818,0,0.656740165994712,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0,0,0.686520205190771,0,0.466311601748341,0.73927574994817,0.318593534327405,2.24901556081802,0.310525913752519,0,0,1.04349012362347,0.450772826991655,0.380805212168795,0.406870733204662,0.727394636810238,0.107410557042488,0.464033759878494,0.398095888698616,0.400027764663154,0,0,0,0,0,0.521988583930423,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr22:30639955..30639992,- | |||
}} |
Revision as of 11:25, 12 September 2013
Short description: | p@chr22:30639955..30639992, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:30639955..30639992, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.27e-53 | 5 |
basophil mast progenitor cell | 5.27e-53 | 5 |
endocrine cell | 1.70e-29 | 9 |
meningothelial cell | 6.26e-12 | 1 |
smooth muscle cell of the subclavian artery | 1.42e-09 | 5 |
myeloid lineage restricted progenitor cell | 3.15e-09 | 66 |
granulocyte monocyte progenitor cell | 4.44e-09 | 67 |
myeloid leukocyte | 2.16e-08 | 72 |
secretory cell | 2.61e-07 | 36 |
smooth muscle cell of the internal thoracic artery | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 7.76e-12 | 1 |
right atrium valve | 7.76e-12 | 1 |
outflow tract of atrium | 7.76e-12 | 1 |
outflow part of right atrium | 7.76e-12 | 1 |
right cardiac atrium | 7.76e-12 | 1 |
bone marrow | 5.44e-10 | 76 |
thoracic segment blood vessel | 1.42e-09 | 5 |
subclavian artery | 1.42e-09 | 5 |
bone element | 3.50e-09 | 82 |
skeletal element | 2.85e-08 | 90 |
immune system | 5.72e-08 | 93 |
hematopoietic system | 1.66e-07 | 98 |
blood island | 1.66e-07 | 98 |
skeletal system | 2.47e-07 | 100 |
trunk blood vessel | 4.46e-07 | 7 |
lateral plate mesoderm | 8.34e-07 | 203 |
internal thoracic artery | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 6.26e-12 | 1 |
meningioma | 6.26e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.