FFCP PHASE1:Hg19::chr22:26879714..26879733,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89781|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15844|TSSclassifier=S|UniProt=F1LLU8|association_with_transcript=15bp_to_ENST00000422379_5end|description=CAGE_peak_3_at_HPS4_5end|id=chr22:26879714..26879733,-|ontology_enrichment_celltype=CL:0000037!1.62e-21!172;CL:0000566!1.62e-21!172;CL:0002032!2.47e-20!165;CL:0000837!2.47e-20!165;CL:0000988!2.77e-19!182;CL:0000738!3.06e-19!140;CL:0002031!2.09e-17!124;CL:0002087!1.47e-15!119;CL:0000542!7.03e-12!53;CL:0000051!7.03e-12!53;CL:0000838!1.84e-11!52;CL:0000763!1.62e-09!112;CL:0000049!1.62e-09!112;CL:0000066!4.45e-08!254;CL:0000766!9.02e-08!76;CL:0002057!1.27e-07!42;CL:0000063!4.19e-07!578;CL:0000860!5.90e-07!45;CL:0000557!7.21e-07!71|ontology_enrichment_celltype_v019=CL:0000542;5.67e-07;53|ontology_enrichment_celltype_v019_2=CL:0000037,4.85e-22,168;CL:0002032,1.38e-20,161;CL:0000837,1.38e-20,161;CL:0000738,3.78e-20,136;CL:0000988,8.03e-20,177;CL:0002031,9.54e-18,120;CL:0002087,9.35e-16,115;CL:0000542,1.45e-11,53;CL:0000051,1.45e-11,53;CL:0000838,4.42e-11,52;CL:0000763,6.84e-10,108;CL:0000049,6.84e-10,108;CL:0000766,1.33e-08,72;CL:0000557,2.77e-07,67;CL:0000860,4.67e-07,42;CL:0002057,4.67e-07,42;CL:0000839,7.38e-07,66|ontology_enrichment_development_v019=CL:0000051;5.67e-07;53|ontology_enrichment_disease=DOID:305!3.26e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,1.39560233594486,1.09220686065086,0.263766978228454,0.495065411840187,0,0.672325146451775,0,0,0.975865597581014,0.984968464614303,0.408001382488506,0.626909442956176,0.286235987131057,0.547497700291537,0.251085279189606,2.36881557818649,1.64201178899891,1.57421562627358,25.5686779951788,6.1412703695554,2.47705797305722,0,2.10844143144775,1.47901604066715,1.85921281392724,0.995184627411951,2.64240395401362,2.76997704265939,3.00816671205213,4.12320654360118,0.671746422719773,1.29557466407592,1.03030227053675,0.581592955118259,1.13362783106643,0.727752183563449,1.85943229524548,2.05583944010913,3.40677007984614,1.7261543539329,2.0492856522328,1.41889337933151,3.44745680736619,3.87290810150296,2.70852973188684,0.752969358170419,2.72906150057846,1.79778787556068,1.53041946185451,2.24650318953266,4.47535988059329,0,1.79517291859469,0.426224750532694,0.290209238628584,0.56738522469114,1.24564449799115,1.7587406567972,2.08593167368081,3.9093992046921,0.605399502633369,4.41933163185078,1.89877432464531,1.26753171787165,1.91343869968539,2.51590374610051,1.57260083605093,0.901061357049038,1.12507910687956,1.71007646244749,0.99458338599545,1.27864907635244,0,1.63841583378639,1.77901850772711,1.70692089026603,0.800791974072025,3.4485146397269,1.32208974556972,0,6.83055562931338,4.69789751496751,8.02773779062981,2.64342657158052,5.60508562981536,2.89722493252585,7.27826149421182,6.28817220398664,11.1024809459735,1.83905144929746,7.17028986593899,4.73447805734733,7.79306913631645,2.45103005147382,6.18672405697158,6.20294904834139,5.95768500283034,1.66518715643378,2.60118695119756,0.822189523018381,1.38175008892924,1.44901542867526,6.22803565280654,3.74557159325598,3.1360657141493,2.49280553934646,9.19729184644611,7.21617635513523,5.56643322442906,0.95569624297229,1.30216690771284,0.950452044448374,1.35517607169996,1.15187950038977,1.24930726552346,0.473554504088034,1.64225599384209,7.25784275609037,7.48832548193821,6.95157138637435,0,0.670700859703636,0,0.361439152384566,0,0,0.795285947051099,1.45990461090791,1.32348744029695,0.221729397462564,0.702678285545008,2.29213382120997,1.09288586487763,1.11235332835329,0,0,0.132957960518865,0.715471872916026,0.571994910780128,0,0.596287222100115,0,0,1.13061588384802,1.25849830862972,0.275118041940067,0.626984899610432,0,1.06729878806013,0.33472061276467,0,0.760272105718513,0,1.10298924103761,0,0.803697554556718,0.673588117878509,0.112611480483322,0,0,0,2.63560834872127,7.75560528296651,0.872188104285069,0,0.12663051166458,1.19168262731897,0.286836620748814,0,0.560677600142307,2.1349799145941,0.98667019366864,0,0.404132016209064,0.326923806226917,0.908144565869588,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0.421352420106746,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0.843881661206331,0,0.757301322732344,0.0920498986422993,0,0,0.10075209822764,0.508681776931463,1.54608682530637,1.09098448236334,1.43402297694502,2.6834215348511,2.38553582978673,1.97529702878181,1.65857688024593,3.02785021050754,1.45990943630332,1.56449532329816,0,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.241011029883482,0.330881918197182,0.653638332277218,1.18635309555548,0.269662616320329,0,0.769494313892781,0,0,0,0,1.26755034821831,2.94848165003288,0,4.41463099414651,5.41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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15844 | |||
|TSSclassifier=S | |||
|UniProt=F1LLU8 | |||
|association_with_transcript=15bp_to_ENST00000422379_5end | |||
|description=CAGE_peak_3_at_HPS4_5end | |||
|id=chr22:26879714..26879733,- | |||
|ontology_enrichment_celltype=CL:0000037!1.62e-21!172;CL:0000566!1.62e-21!172;CL:0002032!2.47e-20!165;CL:0000837!2.47e-20!165;CL:0000988!2.77e-19!182;CL:0000738!3.06e-19!140;CL:0002031!2.09e-17!124;CL:0002087!1.47e-15!119;CL:0000542!7.03e-12!53;CL:0000051!7.03e-12!53;CL:0000838!1.84e-11!52;CL:0000763!1.62e-09!112;CL:0000049!1.62e-09!112;CL:0000066!4.45e-08!254;CL:0000766!9.02e-08!76;CL:0002057!1.27e-07!42;CL:0000063!4.19e-07!578;CL:0000860!5.90e-07!45;CL:0000557!7.21e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.67e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.85e-22,168;CL:0002032,1.38e-20,161;CL:0000837,1.38e-20,161;CL:0000738,3.78e-20,136;CL:0000988,8.03e-20,177;CL:0002031,9.54e-18,120;CL:0002087,9.35e-16,115;CL:0000542,1.45e-11,53;CL:0000051,1.45e-11,53;CL:0000838,4.42e-11,52;CL:0000763,6.84e-10,108;CL:0000049,6.84e-10,108;CL:0000766,1.33e-08,72;CL:0000557,2.77e-07,67;CL:0000860,4.67e-07,42;CL:0002057,4.67e-07,42;CL:0000839,7.38e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000051;5.67e-07;53 | |||
|ontology_enrichment_disease=DOID:305!3.26e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@HPS4 | |||
}} |
Revision as of 11:17, 12 September 2013
Short description: | p3@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HPS4_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000422379_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | F1LLU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.85e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.38e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-20 | 161 |
leukocyte | 3.78e-20 | 136 |
hematopoietic cell | 8.03e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 9.54e-18 | 120 |
nongranular leukocyte | 9.35e-16 | 115 |
lymphocyte | 1.45e-11 | 53 |
common lymphoid progenitor | 1.45e-11 | 53 |
lymphoid lineage restricted progenitor cell | 4.42e-11 | 52 |
myeloid cell | 6.84e-10 | 108 |
common myeloid progenitor | 6.84e-10 | 108 |
myeloid leukocyte | 1.33e-08 | 72 |
granulocyte monocyte progenitor cell | 2.77e-07 | 67 |
classical monocyte | 4.67e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.67e-07 | 42 |
myeloid lineage restricted progenitor cell | 7.38e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.