FFCP PHASE1:Hg19::chr22:22901477..22901499,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23532|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9336|TSSclassifier=S|UniProt=E7EMH2|association_with_transcript=0bp_to_ENST00000420709_5end|coexpression_cluster_id=C93|description=CAGE_peak_4_at_PRAME_5end|id=chr22:22901477..22901499,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;1.43e-10;1!CL:0000313;3.00e-10;1|ontology_enrichment_celltype_v019_2=CL:0002553,1.19e-10,1;CL:0000313,3.29e-10,1|ontology_enrichment_development_v019=UBERON:0005425;3.00e-10;1!UBERON:0009117;1.14e-08;10!UBERON:0005564;1.14e-08;10|ontology_enrichment_disease=DOID:14566!1.33e-31!239;DOID:162!6.06e-30!235;DOID:0050687!5.15e-20!143;DOID:0050686!2.71e-16!137;DOID:305!3.44e-13!106;DOID:8692!1.17e-12!31;DOID:1240!5.45e-11!39;DOID:2531!2.29e-10!51;DOID:0060083!2.29e-10!51;DOID:1036!1.25e-09!8;DOID:1909!2.39e-07!2;DOID:5409!9.52e-07!4|ontology_enrichment_disease_v019=DOID:1909;4.52e-19;2!DOID:1036;4.66e-19;8!DOID:1115;2.62e-11;20!DOID:3371;1.03e-10;1!DOID:4549;1.03e-10;1!DOID:5861;1.03e-10;1!DOID:6496;1.03e-10;1!DOID:2152;3.00e-10;1!DOID:8692;1.27e-07;31|ontology_enrichment_disease_v019_2=DOID:1909,2.61e-19,2;DOID:1036,4.67e-19,8;DOID:1115,2.56e-11,20;DOID:162,6.13e-11,235;DOID:3371,9.84e-11,1;DOID:4549,9.84e-11,1;DOID:5861,9.84e-11,1;DOID:6496,9.84e-11,1;DOID:14566,1.20e-10,239;DOID:2152,3.29e-10,1;DOID:8692,2.41e-07,31;DOID:0050687,3.57e-07,143|ontology_enrichment_uberon=UBERON:0001737!3.21e-07!9|ontology_enrichment_uberon_v019=UBERON:0000941;3.00e-10;1!UBERON:0004911;3.00e-10;1!UBERON:0001785;3.00e-10;1!UBERON:0002464;3.00e-10;1!UBERON:0004904;3.00e-10;1!UBERON:0001021;3.00e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.74e-10,1;UBERON:0001785,2.74e-10,1;UBERON:0002464,2.74e-10,1;UBERON:0004904,2.74e-10,1;UBERON:0001021,2.74e-10,1;UBERON:0003902,2.74e-10,1;UBERON:0005425,2.74e-10,1;UBERON:0004911,3.29e-10,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0.47003968731907,0,1.18504244461122,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,20.5292051161634,19.2141283631385,19.9707688501253,2.27704479269022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0,0,0,0,0,0,4.41280633457501,0,0,0.794858446811959,0,0.391102765469606,0,0,0.599428828746391,0.144090417154106,2.06165873098648,0.686379991447858,0,1.24252535565433,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0.246277562248017,0,1.92630555584214,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,1.24513771442608,0,1.97143852804142,2.28372266835974,0,0,5.21715702998971,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,1.53473245564382,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0.94808167039636,0,1.04314963381548,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.9164274741762,0,0,1.34226518157351,0,0,0,0,0,0,0,0,0.594600453887843,0,0.329821550236287,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0,0,0,0,0,4.25983217921598,0,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,1.43979526614655,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0.538951212639521,0,0,0,0,0,0|short_description=p4@PRAME}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23532 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9336 | |||
|TSSclassifier=S | |||
|UniProt=E7EMH2 | |||
|association_with_transcript=0bp_to_ENST00000420709_5end | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_4_at_PRAME_5end | |||
|id=chr22:22901477..22901499,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.43e-10;1!CL:0000313;3.00e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.19e-10,1;CL:0000313,3.29e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.00e-10;1!UBERON:0009117;1.14e-08;10!UBERON:0005564;1.14e-08;10 | |||
|ontology_enrichment_disease=DOID:14566!1.33e-31!239;DOID:162!6.06e-30!235;DOID:0050687!5.15e-20!143;DOID:0050686!2.71e-16!137;DOID:305!3.44e-13!106;DOID:8692!1.17e-12!31;DOID:1240!5.45e-11!39;DOID:2531!2.29e-10!51;DOID:0060083!2.29e-10!51;DOID:1036!1.25e-09!8;DOID:1909!2.39e-07!2;DOID:5409!9.52e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.52e-19;2!DOID:1036;4.66e-19;8!DOID:1115;2.62e-11;20!DOID:3371;1.03e-10;1!DOID:4549;1.03e-10;1!DOID:5861;1.03e-10;1!DOID:6496;1.03e-10;1!DOID:2152;3.00e-10;1!DOID:8692;1.27e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.61e-19,2;DOID:1036,4.67e-19,8;DOID:1115,2.56e-11,20;DOID:162,6.13e-11,235;DOID:3371,9.84e-11,1;DOID:4549,9.84e-11,1;DOID:5861,9.84e-11,1;DOID:6496,9.84e-11,1;DOID:14566,1.20e-10,239;DOID:2152,3.29e-10,1;DOID:8692,2.41e-07,31;DOID:0050687,3.57e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.00e-10;1!UBERON:0004911;3.00e-10;1!UBERON:0001785;3.00e-10;1!UBERON:0002464;3.00e-10;1!UBERON:0004904;3.00e-10;1!UBERON:0001021;3.00e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.74e-10,1;UBERON:0001785,2.74e-10,1;UBERON:0002464,2.74e-10,1;UBERON:0004904,2.74e-10,1;UBERON:0001021,2.74e-10,1;UBERON:0003902,2.74e-10,1;UBERON:0005425,2.74e-10,1;UBERON:0004911,3.29e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0.47003968731907,0,1.18504244461122,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,20.5292051161634,19.2141283631385,19.9707688501253,2.27704479269022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0,0,0,0,0,0,4.41280633457501,0,0,0.794858446811959,0,0.391102765469606,0,0,0.599428828746391,0.144090417154106,2.06165873098648,0.686379991447858,0,1.24252535565433,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0.246277562248017,0,1.92630555584214,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,1.24513771442608,0,1.97143852804142,2.28372266835974,0,0,5.21715702998971,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,1.53473245564382,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0.94808167039636,0,1.04314963381548,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.9164274741762,0,0,1.34226518157351,0,0,0,0,0,0,0,0,0.594600453887843,0,0.329821550236287,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0,0,0,0,0,4.25983217921598,0,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,1.43979526614655,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0.538951212639521,0,0,0,0,0,0 | |||
|short_description=p4@PRAME | |||
}} |
Revision as of 11:06, 12 September 2013
Short description: | p4@PRAME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PRAME_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 0bp_to_ENST00000420709_5end |
EntrezGene: | PRAME |
HGNC: | 9336 |
UniProt: | E7EMH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.19e-10 | 1 |
serous secreting cell | 3.29e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.74e-10 | 1 |
cranial nerve | 2.74e-10 | 1 |
nerve trunk | 2.74e-10 | 1 |
nerve connecting eye with brain | 2.74e-10 | 1 |
nerve | 2.74e-10 | 1 |
retinal neural layer | 2.74e-10 | 1 |
presumptive neural retina | 2.74e-10 | 1 |
epithelium of female gonad | 3.29e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.61e-19 | 2 |
chronic leukemia | 4.67e-19 | 8 |
sarcoma | 2.56e-11 | 20 |
cancer | 6.13e-11 | 235 |
chondrosarcoma | 9.84e-11 | 1 |
extraosseous chondrosarcoma | 9.84e-11 | 1 |
myxoid chondrosarcoma | 9.84e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 9.84e-11 | 1 |
disease of cellular proliferation | 1.20e-10 | 239 |
ovary epithelial cancer | 3.29e-10 | 1 |
myeloid leukemia | 2.41e-07 | 31 |
cell type cancer | 3.57e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.