FFCP PHASE1:Hg19::chr21:44441260..44441273,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5316|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9022|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000474336_5end|coexpression_cluster_id=C117|description=CAGE_peak_3_at_PKNOX1_5end|id=chr21:44441260..44441273,+|ontology_enrichment_celltype=CL:0002149!6.87e-30!6;CL:0002255!6.87e-30!6;CL:0000159!2.49e-23!2;CL:0000313!7.03e-13!1;CL:0000319!3.08e-12!1;CL:0000499!7.94e-07!27|ontology_enrichment_celltype_v019=CL:0000313;1.84e-34;1!CL:0000159;5.48e-18;2!CL:0002149;8.48e-07;6!CL:0002255;8.48e-07;6|ontology_enrichment_celltype_v019_2=CL:0000313,1.84e-34,1;CL:0000159,5.48e-18,2;CL:0002149,8.97e-07,6;CL:0002255,8.97e-07,6|ontology_enrichment_development_v019=UBERON:0007123;2.01e-59;5|ontology_enrichment_disease=DOID:3001!6.87e-30!6;DOID:299!3.73e-21!25;DOID:120!1.54e-14!27;DOID:193!1.63e-13!29;DOID:2152!7.03e-13!1;DOID:3030!3.08e-12!1;DOID:305!2.33e-07!106;DOID:4468!8.06e-07!2|ontology_enrichment_disease_v019=DOID:2152;1.84e-34;1!DOID:3001;8.48e-07;6|ontology_enrichment_disease_v019_2=DOID:2152,1.84e-34,1;DOID:3001,8.97e-07,6|ontology_enrichment_uberon=UBERON:0000341!1.99e-23!2;UBERON:0002046!4.87e-21!5;UBERON:0004117!4.87e-21!5;UBERON:0007689!4.87e-21!5;UBERON:0007123!4.87e-21!5;UBERON:0003091!4.87e-21!5;UBERON:0004911!7.03e-13!1;UBERON:0009722!6.97e-10!11;UBERON:0007690!6.97e-10!11;UBERON:0000995!9.89e-09!21;UBERON:0005795!2.42e-08!22;UBERON:0003975!2.42e-08!22;UBERON:0003134!1.72e-07!37;UBERON:0000474!1.72e-07!37;UBERON:0008814!2.23e-07!15;UBERON:0004175!2.32e-07!25;UBERON:0004909!4.56e-07!2;UBERON:0003100!9.60e-07!41|ontology_enrichment_uberon_v019=UBERON:0002046;2.01e-59;5!UBERON:0004911;1.84e-34;1!UBERON:0004909;5.48e-18;2!UBERON:0000341;9.07e-18;2!UBERON:0002368;9.76e-09;33!UBERON:0000974;8.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.01e-59,5;UBERON:0004117,2.01e-59,5;UBERON:0007689,2.01e-59,5;UBERON:0007123,2.01e-59,5;UBERON:0003091,2.01e-59,5;UBERON:0004911,1.84e-34,1;UBERON:0009722,1.40e-27,11;UBERON:0007690,1.40e-27,11;UBERON:0004909,5.48e-18,2;UBERON:0000341,7.67e-18,2;UBERON:0008814,3.30e-17,18;UBERON:0002368,3.15e-09,35;UBERON:0000949,2.49e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33570446027487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40758137456606,0,0.867798691675654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0,19.6865559964114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,5.95161078659351,0,0,0,11.2655470152352,5.86139847978836,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@PKNOX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9022 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000474336_5end | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_3_at_PKNOX1_5end | |||
|id=chr21:44441260..44441273,+ | |||
|ontology_enrichment_celltype=CL:0002149!6.87e-30!6;CL:0002255!6.87e-30!6;CL:0000159!2.49e-23!2;CL:0000313!7.03e-13!1;CL:0000319!3.08e-12!1;CL:0000499!7.94e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.84e-34;1!CL:0000159;5.48e-18;2!CL:0002149;8.48e-07;6!CL:0002255;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.84e-34,1;CL:0000159,5.48e-18,2;CL:0002149,8.97e-07,6;CL:0002255,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.01e-59;5 | |||
|ontology_enrichment_disease=DOID:3001!6.87e-30!6;DOID:299!3.73e-21!25;DOID:120!1.54e-14!27;DOID:193!1.63e-13!29;DOID:2152!7.03e-13!1;DOID:3030!3.08e-12!1;DOID:305!2.33e-07!106;DOID:4468!8.06e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.84e-34;1!DOID:3001;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.84e-34,1;DOID:3001,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000341!1.99e-23!2;UBERON:0002046!4.87e-21!5;UBERON:0004117!4.87e-21!5;UBERON:0007689!4.87e-21!5;UBERON:0007123!4.87e-21!5;UBERON:0003091!4.87e-21!5;UBERON:0004911!7.03e-13!1;UBERON:0009722!6.97e-10!11;UBERON:0007690!6.97e-10!11;UBERON:0000995!9.89e-09!21;UBERON:0005795!2.42e-08!22;UBERON:0003975!2.42e-08!22;UBERON:0003134!1.72e-07!37;UBERON:0000474!1.72e-07!37;UBERON:0008814!2.23e-07!15;UBERON:0004175!2.32e-07!25;UBERON:0004909!4.56e-07!2;UBERON:0003100!9.60e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.01e-59;5!UBERON:0004911;1.84e-34;1!UBERON:0004909;5.48e-18;2!UBERON:0000341;9.07e-18;2!UBERON:0002368;9.76e-09;33!UBERON:0000974;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.01e-59,5;UBERON:0004117,2.01e-59,5;UBERON:0007689,2.01e-59,5;UBERON:0007123,2.01e-59,5;UBERON:0003091,2.01e-59,5;UBERON:0004911,1.84e-34,1;UBERON:0009722,1.40e-27,11;UBERON:0007690,1.40e-27,11;UBERON:0004909,5.48e-18,2;UBERON:0000341,7.67e-18,2;UBERON:0008814,3.30e-17,18;UBERON:0002368,3.15e-09,35;UBERON:0000949,2.49e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33570446027487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40758137456606,0,0.867798691675654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0,19.6865559964114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,5.95161078659351,0,0,0,11.2655470152352,5.86139847978836,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PKNOX1 | |||
}} |
Revision as of 10:34, 12 September 2013
Short description: | p3@PKNOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PKNOX1_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 0bp_to_ENST00000474336_5end |
EntrezGene: | PKNOX1 |
HGNC: | 9022 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.84e-34 | 1 |
seromucus secreting cell | 5.48e-18 | 2 |
epithelial cell of uterus | 8.97e-07 | 6 |
stromal cell of endometrium | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.01e-59 | 5 |
pharyngeal pouch | 2.01e-59 | 5 |
thyroid diverticulum | 2.01e-59 | 5 |
pharyngeal pouch 2 | 2.01e-59 | 5 |
thyroid primordium | 2.01e-59 | 5 |
epithelium of female gonad | 1.84e-34 | 1 |
entire pharyngeal arch endoderm | 1.40e-27 | 11 |
early pharyngeal endoderm | 1.40e-27 | 11 |
epithelium of gonad | 5.48e-18 | 2 |
throat | 7.67e-18 | 2 |
pharyngeal arch system | 3.30e-17 | 18 |
endocrine gland | 3.15e-09 | 35 |
endocrine system | 2.49e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.84e-34 | 1 |
female reproductive endometrioid cancer | 8.97e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.