FFCP PHASE1:Hg19::chr21:43944597..43944614,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C179|description=CAGE_peak_at_chr21:43944597..43944614,-|id=chr21:43944597..43944614,-|ontology_enrichment_celltype=CL:0000767!7.32e-10!3;CL:0001014!7.62e-07!2;CL:0001016!7.62e-07!2|ontology_enrichment_celltype_v019=CL:0000037;1.88e-19;1!CL:0001024;1.88e-19;1!CL:0000236;2.29e-13;13!CL:0000945;1.65e-07;24!CL:0000226;2.19e-07;3!CL:0000842;2.19e-07;3!CL:0000767;2.55e-07;3!CL:0000322;3.06e-07;3|ontology_enrichment_celltype_v019_2=CL:0001024,1.88e-19,1;CL:0000236,1.86e-12,14;CL:0000945,1.65e-07,24;CL:0000826,1.65e-07,24;CL:0000226,2.19e-07,3;CL:0000842,2.19e-07,3;CL:0000767,2.63e-07,3;CL:0000322,3.35e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1325;3.85e-11;7!DOID:3904;3.85e-11;7!DOID:3910;3.13e-10;2!DOID:3905;7.16e-09;9|ontology_enrichment_disease_v019_2=DOID:1325,3.85e-11,7;DOID:3904,3.85e-11,7;DOID:3910,3.58e-10,2;DOID:3905,7.16e-09,9|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000341;3.13e-10;2!UBERON:0004903;3.13e-10;2!UBERON:0002173;3.13e-10;2!UBERON:0002186;3.13e-10;2!UBERON:0004821;3.06e-07;3!UBERON:0007499;3.06e-07;3!UBERON:0003215;3.06e-07;3!UBERON:0010368;3.06e-07;3!UBERON:0009911;3.06e-07;3!UBERON:0002299;3.06e-07;3!UBERON:0006524;3.06e-07;3!UBERON:0008874;3.06e-07;3!UBERON:0002169;3.06e-07;3!UBERON:0004894;3.06e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.99e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,2.36018566109342,0.767658796194425,0.464448369948228,0,0,0,0,0,3.22960483268332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0.570025487482497,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,85.9511583355267,12.9192181661607,35.5514102156463,2.64342657158052,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,4.52999821719095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.628817220398664,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0,0,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.863424021355654,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,1.50962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,1.27940389140589,0,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.134704106029175,0,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr21:43944597..43944614,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_at_chr21:43944597..43944614,- | |||
|id=chr21:43944597..43944614,- | |||
|ontology_enrichment_celltype=CL:0000767!7.32e-10!3;CL:0001014!7.62e-07!2;CL:0001016!7.62e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.88e-19;1!CL:0001024;1.88e-19;1!CL:0000236;2.29e-13;13!CL:0000945;1.65e-07;24!CL:0000226;2.19e-07;3!CL:0000842;2.19e-07;3!CL:0000767;2.55e-07;3!CL:0000322;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.88e-19,1;CL:0000236,1.86e-12,14;CL:0000945,1.65e-07,24;CL:0000826,1.65e-07,24;CL:0000226,2.19e-07,3;CL:0000842,2.19e-07,3;CL:0000767,2.63e-07,3;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;3.85e-11;7!DOID:3904;3.85e-11;7!DOID:3910;3.13e-10;2!DOID:3905;7.16e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,3.85e-11,7;DOID:3904,3.85e-11,7;DOID:3910,3.58e-10,2;DOID:3905,7.16e-09,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.13e-10;2!UBERON:0004903;3.13e-10;2!UBERON:0002173;3.13e-10;2!UBERON:0002186;3.13e-10;2!UBERON:0004821;3.06e-07;3!UBERON:0007499;3.06e-07;3!UBERON:0003215;3.06e-07;3!UBERON:0010368;3.06e-07;3!UBERON:0009911;3.06e-07;3!UBERON:0002299;3.06e-07;3!UBERON:0006524;3.06e-07;3!UBERON:0008874;3.06e-07;3!UBERON:0002169;3.06e-07;3!UBERON:0004894;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.99e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,2.36018566109342,0.767658796194425,0.464448369948228,0,0,0,0,0,3.22960483268332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0.570025487482497,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,85.9511583355267,12.9192181661607,35.5514102156463,2.64342657158052,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,4.52999821719095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.628817220398664,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0,0,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.863424021355654,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,1.50962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,1.27940389140589,0,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.134704106029175,0,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr21:43944597..43944614,- | |||
}} |
Revision as of 10:32, 12 September 2013
Short description: | p@chr21:43944597..43944614, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:43944597..43944614, - |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.88e-19 | 1 |
B cell | 1.86e-12 | 14 |
lymphocyte of B lineage | 1.65e-07 | 24 |
pro-B cell | 1.65e-07 | 24 |
single nucleate cell | 2.19e-07 | 3 |
mononuclear cell | 2.19e-07 | 3 |
basophil | 2.63e-07 | 3 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
throat | 2.99e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 3.85e-11 | 7 |
bronchogenic carcinoma | 3.85e-11 | 7 |
lung adenocarcinoma | 3.58e-10 | 2 |
lung carcinoma | 7.16e-09 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.