FFCP PHASE1:Hg19::chr21:42540108..42540124,+: Difference between revisions
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{{FFCP | 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1962063,0,0,0.711418433484141,0.478278818186467,4.7899049143876,0,0,0.649243880549111,0,0,0,10.0253790836027,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,4.22961015263549,2.61996756571508,5.71381899160387,0,0,0.284136146806413,0.47748896947538,2.37571744666111,0.921482106297696,0,0.562677665642051,5.34281784109948,0,0.422250816255987,10.9586393538088,0.552567831062295,0,0,1.23084805461069,2.17727711363265,8.26788830555407,7.33986816169998,0,2.46608514092334,0,0,0,0.463840490809256,0,0.260427761085233,0,1.44999915086959,4.21035758656349,0,31.2031739933676,0,3.49925536059905,0,0,0.482385754501632,0,0.221158519862449,0.295547618953547,0.438770794307945,18.9552926523043,1.39423744278603,2.5393585306253,6.72258129497307,0.23056390438806,0,0,2.87101043758728,1.74035427463538,3.19820865611181,1.02193298195737,5.18034846103582,3.98908036560375,0,0,0,0,0.158936578980379,0.210998064528027,1.63232808159148,0,0,1.99052386215701,1.59223616106011,1.22206028986725,0.296521128680622,0.370691816839509,0.730953646538188,2.02203398942031,0.802577647298789,1.87411556580271,0,0,1.69946265673865,2.36750641709634,3.62972148145992,0,4.61262031287962,1.80388103297391,2.17745201934219,1.99396161812156,0.330991955875499,0,1.19472429772959,0,0.416024019039416,0.694238953340524,2.6457947301882,6.18120366720858,2.09672001890436,2.23581842213102,1.64485763191445,1.90032224424082,1.31384731285135,4.17052770900203,9.44340555599053,2.25980740780532,2.19267079434801,1.78843150532691,0.189932387867636,5.67099009930929,14.7492229262822,15.7955216107121,3.39676336289621,0.72045208577053,0.114536596165916,0,1.29649318189335,0.372757606696298,0.942776138467182,1.9026588850306,1.77824838730966,4.07992870545287,0,0.600420288709789,0.821432273351958,0,1.28929632425987,5.25774708558629,5.86493042671734,2.06244381610515,23.6898098110349,0.798716001995964,0.858452096273142,1.33902874465124,1.41085292222125,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0.408610218334727,0.643012593860077,0.825236619583403,0.415440338029185,0.449947783103001,0,0.182248669974074,1.0063040627978,5.20117668174708,4.93073128468982,0,8.7850796273094,0.767660789277781,2.85878130549347,0.662091970365432,0,7.60199442455198,0,1.95952416065645,1.19730191562487,1.97022049798414,0.170388021785422,3.73929902016415,0.879313402068495,1.32506888912221,1.93924434542326,1.85125642439766,0.342173675768659,0.704815022316672,1.70859860108311,1.41483874589699,1.24271716604159,4.46549419630756,0,0,1.91502377331055,1.08803560673895,0.5013797880454,0.919036730290385,0,2.98402782875445,0,0.122026264901963,0.751145584238999,4.58727356552057,1.22021956690538,4.16045899707269,1.798532254171,0.874862855734746,22.8990167487888,51.6692253716391,5.41111385305795,0,0,0.149254802886874,1.16856654923612,1.66441758450784,3.21985108967651,1.0062716070103,3.55924488638614,1.37304041038154,1.36107831386915,1.24349760466224,4.73136479966829,1.59296767163702,2.24901556081802,1.70789252563885,1.65882483136342,6.38020114939188,5.73919567992907,1.20206087197775,3.42724690951916,0.813741466409323,0.909243296012797,1.93339002676479,3.24823631914946,7.96191777397232,2.40016658797892,0.343395705182793,0.673498977531838,3.78554694685953,0.385239660814607,7.29101410674747,2.60994291965212,4.98753036126999,2.31522474323834,0.244736704506468,11.9989523524597,3.08801447160972,5.04353314031026,10.6013487567529,7.90947556910751,6.92664006677598,3.33113974164331,5.18145512596798,0.911579868532147,0.553033744606923,0.584580926518165,0.132864840313363,0.490696182767533,1.63804924423206,0.491545817507439,7.18461219419332,0,0.320075189082423,0,0.567515953566836,1.10463570151104,4.05650572386389,5.59869534029676,0,0,4.87524419753279,0,8.14716143779321,4.25149840203366,1.85903646388503,2.23457967189298,1.59002175326709,0,5.60399523799829,0,0,0.256916900385838,0,0.478901577171454,0.41023272848151,0.504143392443436,0.760729777106397,0.484426936895553,5.71077681036618,1.27592034051333,0.589848616738702,1.28400018965175,0.924205329202706,4.95796724107317,2.0710797781803,4.17724066444177,1.80504788038217,19.3636865955379,9.37816813479711,0,3.93052602024232,3.10497781055795,0.945526184657525,0,0.206686796501184,0.380494861163441,0,1.64477330057155,2.48105589194647,4.57265235335014,6.38812138197976,0,0,0,0.455324382702595,8.24932042512541,0.345701962667338,0.685952037749674,1.97112225632812,0.394636641377094,2.83665218121524,6.45142130974001,9.34067804921117,0.157115589916002,0,1.82631744101899,16.8423521150525,17.1990607639338,3.57382720883282,0.790068058663633,0,0,0.801711364730253,3.31545862660859,2.0486217251274,0,17.6393217116314,0,0.170426809518315,1.27016115057279,3.2074961596167,6.51433409895072,2.8666168169323,17.6731582240512,18.0596429852047,23.6520774465603,1.94228651156368,3.90118666053739,0,1.94284397223656,0,0.397901550322736,0,24.2834076383764,0,0.754814217833368,1.62065732026684,1.5299169235277,2.82190377816914,2.45148321753905,0.471353094203252,2.94462700672418,2.0793248022896,2.9585900930838,3.39854229375634,0.939839179798536,2.2560260790752,0,0.71421575442263,6.35210769088245,0.0802413666891683,30.6741283063537,12.3856906519226,1.00337708206016,0.631086248772738,0.611923411718232,0,3.7031878836078,7.43990036333503,1.84870251452567,5.62414530760926,0,0,0,0.203977659483963,0.26721740526556,0.918948995348449,0.250707539292375,2.04602485189246,0.803892390468535,1.65833887891756,0.930896962757057,2.98527574661373,1.90451545170992,0.322944549180031,1.30356900021302,5.0459338161276,2.29129769801394,0.606351566874658,4.57205170583619,2.73786640868225,5.45551629418159,13.6272190246085,8.98182962674236,3.66314708749385,0.320182037633146,0,0.179650404213174,4.69281884806909,4.64517487894893,2.84827324821017,11.3178651611537,2.21401172950129,0|short_description=p3@BACE2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=25825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=934 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=53bp_to_ENST00000544566_5end | |||
|coexpression_cluster_id=C4078 | |||
|description=CAGE_peak_3_at_BACE2_5end | |||
|id=chr21:42540108..42540124,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.19e-19!254;CL:0000222!3.47e-15!119;CL:0002139!1.07e-14!24;CL:0000220!1.85e-14!246;CL:0002321!4.37e-14!248;CL:0000213!4.32e-13!57;CL:0000215!4.32e-13!57;CL:0000115!1.19e-12!35;CL:0002078!4.98e-12!44;CL:0000071!1.21e-10!18;CL:0002546!1.21e-10!18;CL:0000076!5.90e-10!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.02e-16;24!CL:0000115;1.71e-12;36!CL:0000071;1.64e-11;18!CL:0002078;3.90e-09;45!CL:0000213;1.47e-08;58!CL:0000215;1.47e-08;58!CL:1000413;5.35e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.40e-18,253;CL:0002139,7.82e-16,24;CL:0000115,1.21e-14,36;CL:0000222,2.67e-14,121;CL:0000213,9.82e-14,58;CL:0000215,9.82e-14,58;CL:0002078,2.72e-13,45;CL:0002321,6.00e-13,250;CL:0000071,1.98e-11,18;CL:0002546,1.98e-11,18;CL:0000076,1.80e-08,63;CL:1000413,5.94e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.64e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.36e-17!69;UBERON:0002049!1.82e-16!79;UBERON:0007798!1.82e-16!79;UBERON:0001981!1.33e-15!60;UBERON:0007500!1.33e-15!60;UBERON:0004537!1.33e-15!60;UBERON:0006965!1.33e-15!60;UBERON:0003914!2.06e-15!118;UBERON:0004872!1.36e-14!84;UBERON:0000477!1.59e-12!286;UBERON:0004535!8.07e-12!110;UBERON:0000483!1.89e-11!309;UBERON:0001009!1.90e-11!113;UBERON:0000119!2.42e-11!312;UBERON:0001637!6.63e-11!42;UBERON:0003509!6.63e-11!42;UBERON:0004572!6.63e-11!42;UBERON:0001986!1.21e-10!18;UBERON:0004638!1.21e-10!18;UBERON:0004852!1.21e-10!18;UBERON:0004111!2.53e-10!241;UBERON:0004573!9.73e-10!33;UBERON:0004571!9.73e-10!33;UBERON:0000487!1.10e-08!22;UBERON:0000468!1.83e-08!659;UBERON:0003104!4.55e-08!238;UBERON:0009142!4.55e-08!238;UBERON:0001048!6.03e-08!168;UBERON:0000025!7.05e-08!194;UBERON:0006914!7.47e-08!25;UBERON:0000481!1.20e-07!347;UBERON:0003103!1.71e-07!69;UBERON:0001737!2.00e-07!9;UBERON:0000490!2.38e-07!138;UBERON:0000467!3.24e-07!625;UBERON:0000480!5.18e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.64e-11;18!UBERON:0001986;1.64e-11;18!UBERON:0004852;1.64e-11;18!UBERON:0000055;1.37e-09;65!UBERON:0000487;2.00e-09;22!UBERON:0001637;3.16e-09;42!UBERON:0003509;3.16e-09;42!UBERON:0004572;3.16e-09;42!UBERON:0007500;4.64e-09;56!UBERON:0001981;4.64e-09;56!UBERON:0004537;4.64e-09;56!UBERON:0004573;4.84e-09;33!UBERON:0004571;4.84e-09;33!UBERON:0006914;4.44e-08;25!UBERON:0001737;5.62e-08;9!UBERON:0001557;5.62e-08;9!UBERON:0002049;1.33e-07;75!UBERON:0007798;1.33e-07;75!UBERON:0003914;1.54e-07;74!UBERON:0003915;5.35e-07;9!UBERON:0004700;5.35e-07;9!UBERON:0001917;5.35e-07;9!UBERON:0000490;7.22e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.09e-18,68;UBERON:0002049,3.28e-17,78;UBERON:0007798,3.28e-17,78;UBERON:0007500,5.79e-17,59;UBERON:0001981,5.79e-17,59;UBERON:0004537,5.79e-17,59;UBERON:0006965,5.79e-17,59;UBERON:0004872,8.03e-15,83;UBERON:0003914,9.62e-15,117;UBERON:0004535,1.48e-11,109;UBERON:0004638,1.98e-11,18;UBERON:0001986,1.98e-11,18;UBERON:0004852,1.98e-11,18;UBERON:0001637,5.40e-11,42;UBERON:0003509,5.40e-11,42;UBERON:0004572,5.40e-11,42;UBERON:0001009,9.12e-11,112;UBERON:0004573,4.80e-10,33;UBERON:0004571,4.80e-10,33;UBERON:0000487,2.14e-09,22;UBERON:0000483,2.05e-08,306;UBERON:0000119,3.18e-08,309;UBERON:0006914,4.58e-08,25;UBERON:0001737,6.18e-08,9;UBERON:0004111,1.03e-07,240;UBERON:0001048,1.12e-07,160;UBERON:0003915,5.94e-07,9;UBERON:0004700,5.94e-07,9;UBERON:0001917,5.94e-07,9 | |||
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| |||
|short_description=p3@BACE2 | |||
}} |
Revision as of 10:27, 12 September 2013
Short description: | p3@BACE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BACE2_5end |
Coexpression cluster: | C4078_Mast_Endothelial_Lymphatic_Melanocyte_melanoma_Hep2_Hepatic |
Association with transcript: | 53bp_to_ENST00000544566_5end |
EntrezGene: | BACE2 |
HGNC: | 934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.40e-18 | 253 |
endothelial cell of vascular tree | 7.82e-16 | 24 |
endothelial cell | 1.21e-14 | 36 |
mesodermal cell | 2.67e-14 | 121 |
lining cell | 9.82e-14 | 58 |
barrier cell | 9.82e-14 | 58 |
meso-epithelial cell | 2.72e-13 | 45 |
embryonic cell | 6.00e-13 | 250 |
blood vessel endothelial cell | 1.98e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.98e-11 | 18 |
squamous epithelial cell | 1.80e-08 | 63 |
endothelial cell of artery | 5.94e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.09e-18 | 68 |
vasculature | 3.28e-17 | 78 |
vascular system | 3.28e-17 | 78 |
epithelial tube open at both ends | 5.79e-17 | 59 |
blood vessel | 5.79e-17 | 59 |
blood vasculature | 5.79e-17 | 59 |
vascular cord | 5.79e-17 | 59 |
splanchnic layer of lateral plate mesoderm | 8.03e-15 | 83 |
epithelial tube | 9.62e-15 | 117 |
cardiovascular system | 1.48e-11 | 109 |
blood vessel endothelium | 1.98e-11 | 18 |
endothelium | 1.98e-11 | 18 |
cardiovascular system endothelium | 1.98e-11 | 18 |
artery | 5.40e-11 | 42 |
arterial blood vessel | 5.40e-11 | 42 |
arterial system | 5.40e-11 | 42 |
circulatory system | 9.12e-11 | 112 |
systemic artery | 4.80e-10 | 33 |
systemic arterial system | 4.80e-10 | 33 |
simple squamous epithelium | 2.14e-09 | 22 |
epithelium | 2.05e-08 | 306 |
cell layer | 3.18e-08 | 309 |
squamous epithelium | 4.58e-08 | 25 |
larynx | 6.18e-08 | 9 |
anatomical conduit | 1.03e-07 | 240 |
primordium | 1.12e-07 | 160 |
endothelial tube | 5.94e-07 | 9 |
arterial system endothelium | 5.94e-07 | 9 |
endothelium of artery | 5.94e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.