FFCP PHASE1:Hg19::chr21:39601840..39601861,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3772|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=6261|TSSclassifier=W|UniProt=|association_with_transcript=-23bp_to_Y13896_5end|coexpression_cluster_id=C2|description=CAGE_peak_3_at_KCNJ15_5end|id=chr21:39601840..39601861,+|ontology_enrichment_celltype=CL:0002057!1.08e-36!42;CL:0000860!1.73e-33!45;CL:0000766!1.25e-26!76;CL:0000738!1.50e-22!140;CL:0002194!2.72e-20!63;CL:0000576!2.72e-20!63;CL:0000040!2.72e-20!63;CL:0000559!2.72e-20!63;CL:0002009!2.34e-19!65;CL:0002087!3.26e-19!119;CL:0000839!2.90e-17!70;CL:0000557!7.00e-17!71;CL:0000037!4.39e-16!172;CL:0000566!4.39e-16!172;CL:0002031!7.16e-16!124;CL:0002032!1.08e-15!165;CL:0000837!1.08e-15!165;CL:0000763!5.90e-15!112;CL:0000049!5.90e-15!112;CL:0000988!2.53e-14!182;CL:0000094!1.44e-13!8;CL:0000081!2.35e-09!11;CL:0000775!6.57e-07!3|ontology_enrichment_celltype_v019=CL:0000860;3.31e-57;33!CL:0002057;3.31e-57;33!CL:0000473;1.42e-39;39!CL:0000234;1.42e-39;39!CL:0000576;7.25e-26;48!CL:0000766;1.03e-16;69!CL:0000775;2.04e-12;3!CL:0000094;5.27e-12;8!CL:0002087;1.11e-11;104!CL:0000763;7.43e-11;100!CL:0000771;9.23e-09;2!CL:0000081;1.31e-08;11!CL:0000738;1.45e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-48,42;CL:0002057,1.50e-48,42;CL:0000473,1.27e-41,48;CL:0000234,1.27e-41,48;CL:0000766,3.31e-38,72;CL:0002194,6.18e-32,59;CL:0000576,6.18e-32,59;CL:0000040,6.18e-32,59;CL:0000559,6.18e-32,59;CL:0002009,1.10e-30,61;CL:0000738,4.38e-29,136;CL:0000839,6.82e-28,66;CL:0000557,2.20e-27,67;CL:0002087,1.69e-25,115;CL:0000763,6.05e-23,108;CL:0000049,6.05e-23,108;CL:0002031,1.88e-22,120;CL:0000037,9.09e-22,168;CL:0002032,1.08e-21,161;CL:0000837,1.08e-21,161;CL:0000988,3.46e-20,177;CL:0000775,2.04e-12,3;CL:0000094,5.27e-12,8;CL:0000771,9.23e-09,2;CL:0000081,1.31e-08,11|ontology_enrichment_development_v019=CL:0002057;3.01e-36;42!CL:0000049;9.85e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.03e-29!115;UBERON:0002390!1.06e-25!102;UBERON:0003061!1.06e-25!102;UBERON:0002193!2.24e-23!112;UBERON:0002371!6.84e-14!80;UBERON:0000178!2.17e-13!15;UBERON:0000179!2.17e-13!15;UBERON:0000463!2.17e-13!15;UBERON:0001474!2.89e-12!86;UBERON:0002405!3.11e-11!115;UBERON:0004765!4.13e-09!101;UBERON:0001434!4.13e-09!101;UBERON:0002298!5.10e-08!8;UBERON:0003081!5.29e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;6.19e-23;15!UBERON:0000179;6.19e-23;15!UBERON:0000463;6.19e-23;15!UBERON:0002390;6.71e-13;32!UBERON:0002193;3.18e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.37e-42,98;UBERON:0003061,8.37e-42,98;UBERON:0002193,2.16e-39,108;UBERON:0002371,2.12e-23,76;UBERON:0002405,3.39e-23,93;UBERON:0000178,6.42e-23,15;UBERON:0000179,6.42e-23,15;UBERON:0000463,6.42e-23,15;UBERON:0001474,3.15e-21,82;UBERON:0004765,8.77e-19,90;UBERON:0001434,2.80e-16,100;UBERON:0003081,1.83e-15,203;UBERON:0002204,2.38e-07,167;UBERON:0000926,7.15e-07,315;UBERON:0004120,7.15e-07,315;UBERON:0006603,7.15e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,7.26991193897824,1.51150377475524,7.76268995801012,1.85943229524548,0.822335776043652,11.7688420940139,4.31538588483226,1.2808035326455,15.371344942758,6.20542225325913,0.645484683583826,9.47985406160392,3.9530891303947,0.818718450173537,9.43838634669355,7.34601341690166,1.28371610830437,11.5080682643827,2.96866170168044,1.59570926097305,2.55734850319616,4.93355705668593,0,5.60540024096017,7.03496262718881,1.5644487552606,23.2392063834475,3.63239701580021,2.20966581592539,21.2029799585393,0,0.425208599930087,0.209658645508376,0,0.600707571366025,0.48217676009124,0,0,0,0,3.82297027883492,0.889509253863555,5.9742231159311,0.800791974072025,0.574752439954483,1.32208974556972,0.954053754535364,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,3.01150238155546,0.511946444617674,6.24653632761729,8.05042656949657,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,152.865284225833,255.934974337895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,361.021385542542,278.220157059743,904.254650317429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.37285620900479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,114.175712077238,113.930943864214,80.3202533915569,78.37825412561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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6261 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_Y13896_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_KCNJ15_5end | |||
|id=chr21:39601840..39601861,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.08e-36!42;CL:0000860!1.73e-33!45;CL:0000766!1.25e-26!76;CL:0000738!1.50e-22!140;CL:0002194!2.72e-20!63;CL:0000576!2.72e-20!63;CL:0000040!2.72e-20!63;CL:0000559!2.72e-20!63;CL:0002009!2.34e-19!65;CL:0002087!3.26e-19!119;CL:0000839!2.90e-17!70;CL:0000557!7.00e-17!71;CL:0000037!4.39e-16!172;CL:0000566!4.39e-16!172;CL:0002031!7.16e-16!124;CL:0002032!1.08e-15!165;CL:0000837!1.08e-15!165;CL:0000763!5.90e-15!112;CL:0000049!5.90e-15!112;CL:0000988!2.53e-14!182;CL:0000094!1.44e-13!8;CL:0000081!2.35e-09!11;CL:0000775!6.57e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-57;33!CL:0002057;3.31e-57;33!CL:0000473;1.42e-39;39!CL:0000234;1.42e-39;39!CL:0000576;7.25e-26;48!CL:0000766;1.03e-16;69!CL:0000775;2.04e-12;3!CL:0000094;5.27e-12;8!CL:0002087;1.11e-11;104!CL:0000763;7.43e-11;100!CL:0000771;9.23e-09;2!CL:0000081;1.31e-08;11!CL:0000738;1.45e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-48,42;CL:0002057,1.50e-48,42;CL:0000473,1.27e-41,48;CL:0000234,1.27e-41,48;CL:0000766,3.31e-38,72;CL:0002194,6.18e-32,59;CL:0000576,6.18e-32,59;CL:0000040,6.18e-32,59;CL:0000559,6.18e-32,59;CL:0002009,1.10e-30,61;CL:0000738,4.38e-29,136;CL:0000839,6.82e-28,66;CL:0000557,2.20e-27,67;CL:0002087,1.69e-25,115;CL:0000763,6.05e-23,108;CL:0000049,6.05e-23,108;CL:0002031,1.88e-22,120;CL:0000037,9.09e-22,168;CL:0002032,1.08e-21,161;CL:0000837,1.08e-21,161;CL:0000988,3.46e-20,177;CL:0000775,2.04e-12,3;CL:0000094,5.27e-12,8;CL:0000771,9.23e-09,2;CL:0000081,1.31e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.01e-36;42!CL:0000049;9.85e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-29!115;UBERON:0002390!1.06e-25!102;UBERON:0003061!1.06e-25!102;UBERON:0002193!2.24e-23!112;UBERON:0002371!6.84e-14!80;UBERON:0000178!2.17e-13!15;UBERON:0000179!2.17e-13!15;UBERON:0000463!2.17e-13!15;UBERON:0001474!2.89e-12!86;UBERON:0002405!3.11e-11!115;UBERON:0004765!4.13e-09!101;UBERON:0001434!4.13e-09!101;UBERON:0002298!5.10e-08!8;UBERON:0003081!5.29e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.19e-23;15!UBERON:0000179;6.19e-23;15!UBERON:0000463;6.19e-23;15!UBERON:0002390;6.71e-13;32!UBERON:0002193;3.18e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.37e-42,98;UBERON:0003061,8.37e-42,98;UBERON:0002193,2.16e-39,108;UBERON:0002371,2.12e-23,76;UBERON:0002405,3.39e-23,93;UBERON:0000178,6.42e-23,15;UBERON:0000179,6.42e-23,15;UBERON:0000463,6.42e-23,15;UBERON:0001474,3.15e-21,82;UBERON:0004765,8.77e-19,90;UBERON:0001434,2.80e-16,100;UBERON:0003081,1.83e-15,203;UBERON:0002204,2.38e-07,167;UBERON:0000926,7.15e-07,315;UBERON:0004120,7.15e-07,315;UBERON:0006603,7.15e-07,315 | |||
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|short_description=p3@KCNJ15 | |||
}} |
Revision as of 10:20, 12 September 2013
Short description: | p3@KCNJ15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCNJ15_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -23bp_to_Y13896_5end |
EntrezGene: | KCNJ15 |
HGNC: | 6261 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.50e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-48 | 42 |
defensive cell | 1.27e-41 | 48 |
phagocyte | 1.27e-41 | 48 |
myeloid leukocyte | 3.31e-38 | 72 |
monopoietic cell | 6.18e-32 | 59 |
monocyte | 6.18e-32 | 59 |
monoblast | 6.18e-32 | 59 |
promonocyte | 6.18e-32 | 59 |
macrophage dendritic cell progenitor | 1.10e-30 | 61 |
leukocyte | 4.38e-29 | 136 |
myeloid lineage restricted progenitor cell | 6.82e-28 | 66 |
granulocyte monocyte progenitor cell | 2.20e-27 | 67 |
nongranular leukocyte | 1.69e-25 | 115 |
myeloid cell | 6.05e-23 | 108 |
common myeloid progenitor | 6.05e-23 | 108 |
hematopoietic lineage restricted progenitor cell | 1.88e-22 | 120 |
hematopoietic stem cell | 9.09e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.08e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-21 | 161 |
hematopoietic cell | 3.46e-20 | 177 |
neutrophil | 2.04e-12 | 3 |
granulocyte | 5.27e-12 | 8 |
eosinophil | 9.23e-09 | 2 |
blood cell | 1.31e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.37e-42 | 98 |
blood island | 8.37e-42 | 98 |
hemolymphoid system | 2.16e-39 | 108 |
bone marrow | 2.12e-23 | 76 |
immune system | 3.39e-23 | 93 |
blood | 6.42e-23 | 15 |
haemolymphatic fluid | 6.42e-23 | 15 |
organism substance | 6.42e-23 | 15 |
bone element | 3.15e-21 | 82 |
skeletal element | 8.77e-19 | 90 |
skeletal system | 2.80e-16 | 100 |
lateral plate mesoderm | 1.83e-15 | 203 |
musculoskeletal system | 2.38e-07 | 167 |
mesoderm | 7.15e-07 | 315 |
mesoderm-derived structure | 7.15e-07 | 315 |
presumptive mesoderm | 7.15e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.