FFCP PHASE1:Hg19::chr20:52612536..52612547,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8537|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=974|TSSclassifier=S|UniProt=|association_with_transcript=-68bp_to_ENST00000422805_5end|coexpression_cluster_id=C163|description=CAGE_peak_9_at_BCAS1_5end|id=chr20:52612536..52612547,-|ontology_enrichment_celltype=CL:0000188!1.15e-09!9|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006241;1.09e-44;3!UBERON:0003057;1.09e-44;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.73e-57!57;UBERON:0005068!4.73e-57!57;UBERON:0006241!4.73e-57!57;UBERON:0007135!4.73e-57!57;UBERON:0002616!3.85e-44!59;UBERON:0003075!1.26e-42!86;UBERON:0007284!1.26e-42!86;UBERON:0005743!4.52e-42!86;UBERON:0001017!9.63e-42!82;UBERON:0007023!1.89e-40!115;UBERON:0002346!2.41e-40!90;UBERON:0000955!8.14e-39!69;UBERON:0006238!8.14e-39!69;UBERON:0000073!2.61e-37!94;UBERON:0001016!2.61e-37!94;UBERON:0003080!4.33e-36!42;UBERON:0002780!1.55e-33!41;UBERON:0001890!1.55e-33!41;UBERON:0006240!1.55e-33!41;UBERON:0002020!2.60e-33!34;UBERON:0003528!2.60e-33!34;UBERON:0002791!8.78e-31!33;UBERON:0001893!9.18e-30!34;UBERON:0002298!3.25e-28!8;UBERON:0003056!1.55e-25!61;UBERON:0000153!4.39e-25!129;UBERON:0007811!4.39e-25!129;UBERON:0002619!4.52e-25!22;UBERON:0000033!5.20e-25!123;UBERON:0001869!1.02e-24!32;UBERON:0001950!1.30e-23!20;UBERON:0003076!2.85e-22!15;UBERON:0003057!2.85e-22!15;UBERON:0000956!8.54e-22!25;UBERON:0000203!8.54e-22!25;UBERON:0004121!5.83e-21!169;UBERON:0000924!2.88e-20!173;UBERON:0006601!2.88e-20!173;UBERON:0000025!5.06e-14!194;UBERON:0004733!9.24e-14!12;UBERON:0002028!9.24e-14!12;UBERON:0007277!9.24e-14!12;UBERON:0002308!2.54e-13!9;UBERON:0000125!2.54e-13!9;UBERON:0004732!1.28e-12!13;UBERON:0000475!2.54e-12!365;UBERON:0004111!3.96e-12!241;UBERON:0000483!4.43e-12!309;UBERON:0000119!7.28e-12!312;UBERON:0002240!7.34e-12!3;UBERON:0006331!8.17e-12!3;UBERON:0001896!1.25e-11!3;UBERON:0005290!1.25e-11!3;UBERON:0010096!1.25e-11!3;UBERON:0000988!1.91e-11!3;UBERON:0002771!3.11e-11!3;UBERON:0002021!9.34e-11!5;UBERON:0001871!1.80e-10!7;UBERON:0000477!1.44e-09!286;UBERON:0000200!2.70e-09!6;UBERON:0002420!3.60e-09!9;UBERON:0007245!3.60e-09!9;UBERON:0010009!3.60e-09!9;UBERON:0010011!3.60e-09!9;UBERON:0000454!3.60e-09!9;UBERON:0000481!1.24e-08!347;UBERON:0002950!1.33e-08!2;UBERON:0001891!1.33e-08!2;UBERON:0009616!1.33e-08!2;UBERON:0001897!1.59e-08!2;UBERON:0002148!2.63e-08!2;UBERON:0009662!2.63e-08!2;UBERON:0009663!7.12e-08!7;UBERON:0000064!7.20e-08!219;UBERON:0003127!1.59e-07!2;UBERON:0005174!2.95e-07!5;UBERON:0001137!2.95e-07!5|ontology_enrichment_uberon_v019=UBERON:0002240;1.09e-44;3!UBERON:0005174;1.09e-44;3!UBERON:0001137;1.09e-44;3!UBERON:0002038;5.97e-34;1!UBERON:0009661;5.97e-34;1!UBERON:0002950;5.97e-34;1!UBERON:0001891;5.97e-34;1!UBERON:0002771;9.86e-18;2!UBERON:0001134;2.72e-09;16!UBERON:0002036;2.72e-09;16!UBERON:0000200;8.72e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.77e-45,3;UBERON:0005174,9.77e-45,3;UBERON:0001137,9.77e-45,3;UBERON:0002038,3.61e-34,1;UBERON:0009661,3.61e-34,1;UBERON:0002950,3.61e-34,1;UBERON:0001891,3.61e-34,1;UBERON:0009616,3.61e-34,1;UBERON:0010286,3.61e-34,1;UBERON:0002771,1.27e-17,2;UBERON:0003076,7.75e-10,15;UBERON:0003057,7.75e-10,15;UBERON:0001049,7.87e-10,56;UBERON:0005068,7.87e-10,56;UBERON:0006241,7.87e-10,56;UBERON:0007135,7.87e-10,56;UBERON:0001017,6.64e-07,81;UBERON:0003075,6.64e-07,82;UBERON:0007284,6.64e-07,82;UBERON:0000200,9.49e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.551346289938122,0,0.435050081742686,0.596586391912706,6.6774026735053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.741412462787447,0,0.702793337176017,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8537 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=974 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-68bp_to_ENST00000422805_5end | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_9_at_BCAS1_5end | |||
|id=chr20:52612536..52612547,- | |||
|ontology_enrichment_celltype=CL:0000188!1.15e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.09e-44;3!UBERON:0003057;1.09e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.73e-57!57;UBERON:0005068!4.73e-57!57;UBERON:0006241!4.73e-57!57;UBERON:0007135!4.73e-57!57;UBERON:0002616!3.85e-44!59;UBERON:0003075!1.26e-42!86;UBERON:0007284!1.26e-42!86;UBERON:0005743!4.52e-42!86;UBERON:0001017!9.63e-42!82;UBERON:0007023!1.89e-40!115;UBERON:0002346!2.41e-40!90;UBERON:0000955!8.14e-39!69;UBERON:0006238!8.14e-39!69;UBERON:0000073!2.61e-37!94;UBERON:0001016!2.61e-37!94;UBERON:0003080!4.33e-36!42;UBERON:0002780!1.55e-33!41;UBERON:0001890!1.55e-33!41;UBERON:0006240!1.55e-33!41;UBERON:0002020!2.60e-33!34;UBERON:0003528!2.60e-33!34;UBERON:0002791!8.78e-31!33;UBERON:0001893!9.18e-30!34;UBERON:0002298!3.25e-28!8;UBERON:0003056!1.55e-25!61;UBERON:0000153!4.39e-25!129;UBERON:0007811!4.39e-25!129;UBERON:0002619!4.52e-25!22;UBERON:0000033!5.20e-25!123;UBERON:0001869!1.02e-24!32;UBERON:0001950!1.30e-23!20;UBERON:0003076!2.85e-22!15;UBERON:0003057!2.85e-22!15;UBERON:0000956!8.54e-22!25;UBERON:0000203!8.54e-22!25;UBERON:0004121!5.83e-21!169;UBERON:0000924!2.88e-20!173;UBERON:0006601!2.88e-20!173;UBERON:0000025!5.06e-14!194;UBERON:0004733!9.24e-14!12;UBERON:0002028!9.24e-14!12;UBERON:0007277!9.24e-14!12;UBERON:0002308!2.54e-13!9;UBERON:0000125!2.54e-13!9;UBERON:0004732!1.28e-12!13;UBERON:0000475!2.54e-12!365;UBERON:0004111!3.96e-12!241;UBERON:0000483!4.43e-12!309;UBERON:0000119!7.28e-12!312;UBERON:0002240!7.34e-12!3;UBERON:0006331!8.17e-12!3;UBERON:0001896!1.25e-11!3;UBERON:0005290!1.25e-11!3;UBERON:0010096!1.25e-11!3;UBERON:0000988!1.91e-11!3;UBERON:0002771!3.11e-11!3;UBERON:0002021!9.34e-11!5;UBERON:0001871!1.80e-10!7;UBERON:0000477!1.44e-09!286;UBERON:0000200!2.70e-09!6;UBERON:0002420!3.60e-09!9;UBERON:0007245!3.60e-09!9;UBERON:0010009!3.60e-09!9;UBERON:0010011!3.60e-09!9;UBERON:0000454!3.60e-09!9;UBERON:0000481!1.24e-08!347;UBERON:0002950!1.33e-08!2;UBERON:0001891!1.33e-08!2;UBERON:0009616!1.33e-08!2;UBERON:0001897!1.59e-08!2;UBERON:0002148!2.63e-08!2;UBERON:0009662!2.63e-08!2;UBERON:0009663!7.12e-08!7;UBERON:0000064!7.20e-08!219;UBERON:0003127!1.59e-07!2;UBERON:0005174!2.95e-07!5;UBERON:0001137!2.95e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.09e-44;3!UBERON:0005174;1.09e-44;3!UBERON:0001137;1.09e-44;3!UBERON:0002038;5.97e-34;1!UBERON:0009661;5.97e-34;1!UBERON:0002950;5.97e-34;1!UBERON:0001891;5.97e-34;1!UBERON:0002771;9.86e-18;2!UBERON:0001134;2.72e-09;16!UBERON:0002036;2.72e-09;16!UBERON:0000200;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.77e-45,3;UBERON:0005174,9.77e-45,3;UBERON:0001137,9.77e-45,3;UBERON:0002038,3.61e-34,1;UBERON:0009661,3.61e-34,1;UBERON:0002950,3.61e-34,1;UBERON:0001891,3.61e-34,1;UBERON:0009616,3.61e-34,1;UBERON:0010286,3.61e-34,1;UBERON:0002771,1.27e-17,2;UBERON:0003076,7.75e-10,15;UBERON:0003057,7.75e-10,15;UBERON:0001049,7.87e-10,56;UBERON:0005068,7.87e-10,56;UBERON:0006241,7.87e-10,56;UBERON:0007135,7.87e-10,56;UBERON:0001017,6.64e-07,81;UBERON:0003075,6.64e-07,82;UBERON:0007284,6.64e-07,82;UBERON:0000200,9.49e-07,6 | |||
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|short_description=p9@BCAS1 | |||
}} |
Revision as of 09:14, 12 September 2013
Short description: | p9@BCAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_BCAS1_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | -68bp_to_ENST00000422805_5end |
EntrezGene: | BCAS1 |
HGNC: | 974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 9.77e-45 | 3 |
dorsal region element | 9.77e-45 | 3 |
dorsum | 9.77e-45 | 3 |
substantia nigra | 3.61e-34 | 1 |
midbrain nucleus | 3.61e-34 | 1 |
regional part of midbrain | 3.61e-34 | 1 |
midbrain | 3.61e-34 | 1 |
presumptive midbrain | 3.61e-34 | 1 |
midbrain neural tube | 3.61e-34 | 1 |
middle temporal gyrus | 1.27e-17 | 2 |
posterior neural tube | 7.75e-10 | 15 |
chordal neural plate | 7.75e-10 | 15 |
neural tube | 7.87e-10 | 56 |
neural rod | 7.87e-10 | 56 |
future spinal cord | 7.87e-10 | 56 |
neural keel | 7.87e-10 | 56 |
central nervous system | 6.64e-07 | 81 |
neural plate | 6.64e-07 | 82 |
presumptive neural plate | 6.64e-07 | 82 |
gyrus | 9.49e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.