FFCP PHASE1:Hg19::chr20:48807548..48807572,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1051|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1834|TSSclassifier=S|UniProt=P17676|association_with_transcript=172bp_to_ENST00000303004,uc002xvh.2,uc002xvi.1_5end|description=CAGE_peak_14_at_CEBPB_5end|id=chr20:48807548..48807572,+|ontology_enrichment_celltype=CL:0002057!4.07e-24!42;CL:0000860!1.41e-23!45;CL:0000766!3.62e-22!76;CL:0002194!2.38e-19!63;CL:0000576!2.38e-19!63;CL:0000040!2.38e-19!63;CL:0000559!2.38e-19!63;CL:0000839!2.46e-19!70;CL:0000557!5.12e-18!71;CL:0002009!8.81e-18!65;CL:0000763!4.04e-09!112;CL:0000049!4.04e-09!112|ontology_enrichment_celltype_v019=CL:0000860;2.11e-35;33!CL:0002057;2.11e-35;33!CL:0000576;2.11e-28;48!CL:0000473;6.92e-28;39!CL:0000234;6.92e-28;39!CL:0000766;6.67e-20;69!CL:0000763;1.38e-08;100!CL:0002393;1.40e-08;6!CL:0002397;1.40e-08;6!CL:0000094;4.92e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,6.55e-45,42;CL:0002057,6.55e-45,42;CL:0000473,7.10e-42,48;CL:0000234,7.10e-42,48;CL:0000766,1.50e-40,72;CL:0002194,1.41e-36,59;CL:0000576,1.41e-36,59;CL:0000040,1.41e-36,59;CL:0000559,1.41e-36,59;CL:0002009,6.39e-35,61;CL:0000839,3.85e-33,66;CL:0000557,1.96e-32,67;CL:0000763,1.04e-21,108;CL:0000049,1.04e-21,108;CL:0000738,5.26e-15,136;CL:0002320,3.84e-14,361;CL:0000134,7.33e-14,354;CL:0002087,3.45e-13,115;CL:0002031,3.20e-12,120;CL:0000219,4.81e-12,386;CL:0000988,5.40e-10,177;CL:0002032,7.19e-10,161;CL:0000837,7.19e-10,161;CL:0000723,1.40e-09,433;CL:0000037,1.66e-09,168;CL:0000048,1.66e-09,427;CL:0000034,5.80e-09,441;CL:0002393,1.45e-07,9;CL:0002397,1.45e-07,9;CL:0000094,4.09e-07,8|ontology_enrichment_development_v019=CL:0002057;1.79e-32;42!CL:0000049;8.43e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.61e-14!80;UBERON:0001474!7.36e-14!86;UBERON:0004765!2.88e-11!101;UBERON:0001434!2.88e-11!101;UBERON:0002390!5.51e-11!102;UBERON:0003061!5.51e-11!102;UBERON:0002405!1.84e-10!115;UBERON:0002193!2.42e-09!112;UBERON:0000926!6.81e-08!448;UBERON:0004120!6.81e-08!448;UBERON:0006603!6.81e-08!448;UBERON:0002204!9.25e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-28,76;UBERON:0001474,1.78e-26,82;UBERON:0004765,7.60e-23,90;UBERON:0002405,9.84e-22,93;UBERON:0001434,1.94e-21,100;UBERON:0002390,7.92e-20,98;UBERON:0003061,7.92e-20,98;UBERON:0002193,8.84e-18,108;UBERON:0002384,1.22e-13,371;UBERON:0002204,6.51e-11,167;UBERON:0003081,2.28e-07,203;UBERON:0000926,4.51e-07,315;UBERON:0004120,4.51e-07,315;UBERON:0006603,4.51e-07,315|phase1_expression=0.726713517082227,2.35510576280081,1.9733616573436,0,2.68176656656373,2.61701557230111,0,4.42203911398782,2.08948502559871,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0.487932798790507,0.369363174230364,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0,0,0.0787107813136792,1.96682138424452,0,2.01260960310899,0.919421224478927,0.30120591877825,0.739508020333575,0.154934401160603,0,0,2.76997704265939,1.80490002723128,1.30206522429511,2.68698569087909,0.971680998056939,2.06060454107349,4.07115068582781,4.91238726795452,2.91100873425379,4.41615170120801,4.11167888021826,2.16794459626573,1.1507695692886,2.56160706529101,2.12834006899727,2.75796544589295,3.22742341791913,2.70852973188684,5.83551252582075,3.547779950752,2.9214052977861,2.75475503133812,2.56743221660875,0.639337125799041,3.62836430205388,4.3882004676759,3.83602275479425,2.90209238628584,3.40431134814684,2.4912889959823,3.26623264833766,4.17186334736161,1.95469960234605,4.84319602106695,0.368277635987565,0.316462387440884,2.5350634357433,1.91343869968539,3.14487968262564,2.69588714751588,1.80212271409808,1.44653028027372,0.570025487482497,0.99458338599545,1.82664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.25618263945135,0,0,0,0.289803085735052,0.296573126324121,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.12786256184353,0.361439152384566,4.51204119572301,1.15877215168659,0,0.486634870302636,0,0.221729397462564,0,0.130979075497713,1.09288586487763,0,0.324547393654683,0,0.664789802594326,0.476981248610684,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0,5.27121669744253,0,0.436094052142534,0,0.759783069987479,0.132409180813219,0,0,0,0,1.48000529050296,0,0.67355336034844,0.326923806226917,0,0,0.234321431833797,0.624320153660641,1.1409436430889,0.747243402759005,0.23486899728753,0.485618833104395,0.140450806702248,0.816616685019573,0.122834317311768,0.516628905878827,1.18800285728205,0.989067717114227,0,2.15585442544872,0.168336113954066,0,0,0.438977620880838,0.612975591598039,2.10333282469236,0.226864366320042,0.179389635688862,0.427114777637135,0,0.300091096084402,0.206105058476878,0,0,0.337552664482532,0,0,0.184099797284599,0.1616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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1834 | |||
|TSSclassifier=S | |||
|UniProt=P17676 | |||
|association_with_transcript=172bp_to_ENST00000303004,uc002xvh.2,uc002xvi.1_5end | |||
|description=CAGE_peak_14_at_CEBPB_5end | |||
|id=chr20:48807548..48807572,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.07e-24!42;CL:0000860!1.41e-23!45;CL:0000766!3.62e-22!76;CL:0002194!2.38e-19!63;CL:0000576!2.38e-19!63;CL:0000040!2.38e-19!63;CL:0000559!2.38e-19!63;CL:0000839!2.46e-19!70;CL:0000557!5.12e-18!71;CL:0002009!8.81e-18!65;CL:0000763!4.04e-09!112;CL:0000049!4.04e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-35;33!CL:0002057;2.11e-35;33!CL:0000576;2.11e-28;48!CL:0000473;6.92e-28;39!CL:0000234;6.92e-28;39!CL:0000766;6.67e-20;69!CL:0000763;1.38e-08;100!CL:0002393;1.40e-08;6!CL:0002397;1.40e-08;6!CL:0000094;4.92e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.55e-45,42;CL:0002057,6.55e-45,42;CL:0000473,7.10e-42,48;CL:0000234,7.10e-42,48;CL:0000766,1.50e-40,72;CL:0002194,1.41e-36,59;CL:0000576,1.41e-36,59;CL:0000040,1.41e-36,59;CL:0000559,1.41e-36,59;CL:0002009,6.39e-35,61;CL:0000839,3.85e-33,66;CL:0000557,1.96e-32,67;CL:0000763,1.04e-21,108;CL:0000049,1.04e-21,108;CL:0000738,5.26e-15,136;CL:0002320,3.84e-14,361;CL:0000134,7.33e-14,354;CL:0002087,3.45e-13,115;CL:0002031,3.20e-12,120;CL:0000219,4.81e-12,386;CL:0000988,5.40e-10,177;CL:0002032,7.19e-10,161;CL:0000837,7.19e-10,161;CL:0000723,1.40e-09,433;CL:0000037,1.66e-09,168;CL:0000048,1.66e-09,427;CL:0000034,5.80e-09,441;CL:0002393,1.45e-07,9;CL:0002397,1.45e-07,9;CL:0000094,4.09e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-32;42!CL:0000049;8.43e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.61e-14!80;UBERON:0001474!7.36e-14!86;UBERON:0004765!2.88e-11!101;UBERON:0001434!2.88e-11!101;UBERON:0002390!5.51e-11!102;UBERON:0003061!5.51e-11!102;UBERON:0002405!1.84e-10!115;UBERON:0002193!2.42e-09!112;UBERON:0000926!6.81e-08!448;UBERON:0004120!6.81e-08!448;UBERON:0006603!6.81e-08!448;UBERON:0002204!9.25e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-28,76;UBERON:0001474,1.78e-26,82;UBERON:0004765,7.60e-23,90;UBERON:0002405,9.84e-22,93;UBERON:0001434,1.94e-21,100;UBERON:0002390,7.92e-20,98;UBERON:0003061,7.92e-20,98;UBERON:0002193,8.84e-18,108;UBERON:0002384,1.22e-13,371;UBERON:0002204,6.51e-11,167;UBERON:0003081,2.28e-07,203;UBERON:0000926,4.51e-07,315;UBERON:0004120,4.51e-07,315;UBERON:0006603,4.51e-07,315 | |||
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| |||
|short_description=p14@CEBPB | |||
}} |
Revision as of 09:02, 12 September 2013
Short description: | p14@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_CEBPB_5end |
Coexpression cluster: | NA |
Association with transcript: | 172bp_to_ENST00000303004, uc002xvh.2, uc002xvi.1_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | P17676 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-28 | 76 |
bone element | 1.78e-26 | 82 |
skeletal element | 7.60e-23 | 90 |
immune system | 9.84e-22 | 93 |
skeletal system | 1.94e-21 | 100 |
hematopoietic system | 7.92e-20 | 98 |
blood island | 7.92e-20 | 98 |
hemolymphoid system | 8.84e-18 | 108 |
connective tissue | 1.22e-13 | 371 |
musculoskeletal system | 6.51e-11 | 167 |
lateral plate mesoderm | 2.28e-07 | 203 |
mesoderm | 4.51e-07 | 315 |
mesoderm-derived structure | 4.51e-07 | 315 |
presumptive mesoderm | 4.51e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.