FFCP PHASE1:Hg19::chr20:48140767..48140776,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C517|description=CAGE_peak_at_chr20:48140767..48140776,-|id=chr20:48140767..48140776,-|ontology_enrichment_celltype=CL:1000306!2.00e-08!4;CL:0002547!2.00e-08!4;CL:0002494!4.61e-08!16;CL:0000569!1.30e-07!4;CL:0000011!1.30e-07!4;CL:0000135!2.04e-07!3;CL:0000386!2.04e-07!3;CL:0000388!2.04e-07!3;CL:0002579!4.59e-07!3|ontology_enrichment_celltype_v019=CL:0000135;4.51e-30;3!CL:0000388;4.51e-30;3!CL:0000214;8.75e-15;3!CL:0002581;9.07e-12;1!CL:0000511;3.28e-11;1!CL:0002625;3.28e-11;1!CL:0000216;3.28e-11;1!CL:0002591;3.28e-11;1!CL:0002616;3.28e-11;1!CL:0000499;7.14e-09;28!CL:0000077;1.09e-08;19|ontology_enrichment_celltype_v019_2=CL:0000135,5.00e-30,3;CL:0000388,5.00e-30,3;CL:0000214,9.39e-15,3;CL:0002581,8.62e-12,1;CL:0002616,1.78e-11,1;CL:0000511,2.42e-11,1;CL:0002625,2.42e-11,1;CL:0000216,2.42e-11,1;CL:0002591,5.43e-11,1;CL:0000499,7.39e-09,28;CL:0000077,1.01e-08,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004457!8.68e-10!12;UBERON:0000042!8.68e-10!12;UBERON:0004458!2.08e-09!49;UBERON:0007100!7.05e-09!27;UBERON:0003688!1.36e-08!6;UBERON:0002358!1.36e-08!6;UBERON:0003684!1.36e-08!6;UBERON:0001178!1.36e-08!6;UBERON:0000415!2.00e-08!4;UBERON:0007240!2.00e-08!4;UBERON:0005742!2.00e-08!4;UBERON:0005734!2.00e-08!4;UBERON:0004664!2.00e-08!4;UBERON:0004663!2.00e-08!4;UBERON:0002323!9.69e-08!46;UBERON:0004872!1.02e-07!84;UBERON:0000043!2.04e-07!3;UBERON:0000948!2.51e-07!24;UBERON:0005498!2.51e-07!24;UBERON:0004140!2.51e-07!24;UBERON:0009881!2.51e-07!24;UBERON:0004141!2.51e-07!24;UBERON:0003084!2.51e-07!24;UBERON:0007005!2.51e-07!24;UBERON:0004139!2.51e-07!24;UBERON:0004291!2.51e-07!24;UBERON:0004573!3.71e-07!33;UBERON:0004571!3.71e-07!33;UBERON:0001637!4.99e-07!42;UBERON:0003509!4.99e-07!42;UBERON:0004572!4.99e-07!42|ontology_enrichment_uberon_v019=UBERON:0007846;4.51e-30;3!UBERON:0000043;4.51e-30;3!UBERON:0007845;4.51e-30;3!UBERON:0005406;3.29e-21;2!UBERON:0006915;8.75e-15;3!UBERON:0007616;8.75e-15;3!UBERON:0002217;8.75e-15;3!UBERON:0002018;8.75e-15;3!UBERON:0001136;3.28e-11;1!UBERON:0001343;3.28e-11;1!UBERON:0004910;3.28e-11;1!UBERON:0004813;3.28e-11;1!UBERON:0004457;9.01e-11;9!UBERON:0000042;9.01e-11;9|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.00e-30,3;UBERON:0000043,5.00e-30,3;UBERON:0007845,5.00e-30,3;UBERON:0005406,1.70e-21,2;UBERON:0006915,9.39e-15,3;UBERON:0007616,9.39e-15,3;UBERON:0002217,9.39e-15,3;UBERON:0002018,9.39e-15,3;UBERON:0001136,2.42e-11,1;UBERON:0001343,2.42e-11,1;UBERON:0004910,2.42e-11,1;UBERON:0005154,2.42e-11,1;UBERON:0005295,2.42e-11,1;UBERON:0004813,2.42e-11,1;UBERON:0005297,2.42e-11,1;UBERON:0005294,2.42e-11,1;UBERON:0010141,2.42e-11,1;UBERON:0005891,2.42e-11,1;UBERON:0004457,3.67e-08,12;UBERON:0000042,3.67e-08,12|phase1_expression=0.363356758541113,0,0.563817616383885,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,0.132409180813219,2.29469296599051,0.709336764396714,2.80338800071154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,0,3.89894665610022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.841980283299221,1.15325234330131,0.511707249066704,0.804269605718038,4.45254199334973,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,1.13008116620243,0,1.32687795048244,0.438450885253763,0,0,0,0.6196469961995,0,0,0,0,0,3.37772216476263,4.28083360847872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0.311039587661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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48140767..48140776,- | |||
|id=chr20:48140767..48140776,- | |||
|ontology_enrichment_celltype=CL:1000306!2.00e-08!4;CL:0002547!2.00e-08!4;CL:0002494!4.61e-08!16;CL:0000569!1.30e-07!4;CL:0000011!1.30e-07!4;CL:0000135!2.04e-07!3;CL:0000386!2.04e-07!3;CL:0000388!2.04e-07!3;CL:0002579!4.59e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000135;4.51e-30;3!CL:0000388;4.51e-30;3!CL:0000214;8.75e-15;3!CL:0002581;9.07e-12;1!CL:0000511;3.28e-11;1!CL:0002625;3.28e-11;1!CL:0000216;3.28e-11;1!CL:0002591;3.28e-11;1!CL:0002616;3.28e-11;1!CL:0000499;7.14e-09;28!CL:0000077;1.09e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,5.00e-30,3;CL:0000388,5.00e-30,3;CL:0000214,9.39e-15,3;CL:0002581,8.62e-12,1;CL:0002616,1.78e-11,1;CL:0000511,2.42e-11,1;CL:0002625,2.42e-11,1;CL:0000216,2.42e-11,1;CL:0002591,5.43e-11,1;CL:0000499,7.39e-09,28;CL:0000077,1.01e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!8.68e-10!12;UBERON:0000042!8.68e-10!12;UBERON:0004458!2.08e-09!49;UBERON:0007100!7.05e-09!27;UBERON:0003688!1.36e-08!6;UBERON:0002358!1.36e-08!6;UBERON:0003684!1.36e-08!6;UBERON:0001178!1.36e-08!6;UBERON:0000415!2.00e-08!4;UBERON:0007240!2.00e-08!4;UBERON:0005742!2.00e-08!4;UBERON:0005734!2.00e-08!4;UBERON:0004664!2.00e-08!4;UBERON:0004663!2.00e-08!4;UBERON:0002323!9.69e-08!46;UBERON:0004872!1.02e-07!84;UBERON:0000043!2.04e-07!3;UBERON:0000948!2.51e-07!24;UBERON:0005498!2.51e-07!24;UBERON:0004140!2.51e-07!24;UBERON:0009881!2.51e-07!24;UBERON:0004141!2.51e-07!24;UBERON:0003084!2.51e-07!24;UBERON:0007005!2.51e-07!24;UBERON:0004139!2.51e-07!24;UBERON:0004291!2.51e-07!24;UBERON:0004573!3.71e-07!33;UBERON:0004571!3.71e-07!33;UBERON:0001637!4.99e-07!42;UBERON:0003509!4.99e-07!42;UBERON:0004572!4.99e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.51e-30;3!UBERON:0000043;4.51e-30;3!UBERON:0007845;4.51e-30;3!UBERON:0005406;3.29e-21;2!UBERON:0006915;8.75e-15;3!UBERON:0007616;8.75e-15;3!UBERON:0002217;8.75e-15;3!UBERON:0002018;8.75e-15;3!UBERON:0001136;3.28e-11;1!UBERON:0001343;3.28e-11;1!UBERON:0004910;3.28e-11;1!UBERON:0004813;3.28e-11;1!UBERON:0004457;9.01e-11;9!UBERON:0000042;9.01e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.00e-30,3;UBERON:0000043,5.00e-30,3;UBERON:0007845,5.00e-30,3;UBERON:0005406,1.70e-21,2;UBERON:0006915,9.39e-15,3;UBERON:0007616,9.39e-15,3;UBERON:0002217,9.39e-15,3;UBERON:0002018,9.39e-15,3;UBERON:0001136,2.42e-11,1;UBERON:0001343,2.42e-11,1;UBERON:0004910,2.42e-11,1;UBERON:0005154,2.42e-11,1;UBERON:0005295,2.42e-11,1;UBERON:0004813,2.42e-11,1;UBERON:0005297,2.42e-11,1;UBERON:0005294,2.42e-11,1;UBERON:0010141,2.42e-11,1;UBERON:0005891,2.42e-11,1;UBERON:0004457,3.67e-08,12;UBERON:0000042,3.67e-08,12 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,0.132409180813219,2.29469296599051,0.709336764396714,2.80338800071154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,0,3.89894665610022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.841980283299221,1.15325234330131,0.511707249066704,0.804269605718038,4.45254199334973,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,1.13008116620243,0,1.32687795048244,0.438450885253763,0,0,0,0.6196469961995,0,0,0,0,0,3.37772216476263,4.28083360847872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.426905989478705,1.59847687665704,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0.907385542579434,0.310874401165561,0.147855149989634,0,0,0,1.65882483136342,0,0,0.450772826991655,1.14241563650639,0,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0.463044948647668,0,0,0,1.53498834705095,0,0.192914038270915,0.506827321959218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,1.11598505450025,1.38652688589425,1.73050624849516,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr20:48140767..48140776,- | |||
}} |
Revision as of 08:59, 12 September 2013
Short description: | p@chr20:48140767..48140776, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:48140767..48140776, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.00e-30 | 3 |
tendon cell | 5.00e-30 | 3 |
synovial cell | 9.39e-15 | 3 |
perirenal preadipocyte | 8.62e-12 | 1 |
perirenal adipocyte cell | 1.78e-11 | 1 |
androgen binding protein secreting cell | 2.42e-11 | 1 |
seminiferous tubule epithelial cell | 2.42e-11 | 1 |
Sertoli cell | 2.42e-11 | 1 |
smooth muscle cell of the pulmonary artery | 5.43e-11 | 1 |
stromal cell | 7.39e-09 | 28 |
mesothelial cell | 1.01e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.00e-30 | 3 |
tendon | 5.00e-30 | 3 |
regular connective tissue | 5.00e-30 | 3 |
perirenal fat | 1.70e-21 | 2 |
stratified squamous epithelium | 9.39e-15 | 3 |
layer of synovial tissue | 9.39e-15 | 3 |
synovial joint | 9.39e-15 | 3 |
synovial membrane of synovial joint | 9.39e-15 | 3 |
mesothelium | 2.42e-11 | 1 |
seminiferous tubule of testis | 2.42e-11 | 1 |
epithelium of male gonad | 2.42e-11 | 1 |
epithelial cord | 2.42e-11 | 1 |
sex cord | 2.42e-11 | 1 |
seminiferous tubule epithelium | 2.42e-11 | 1 |
testis sex cord | 2.42e-11 | 1 |
genital ridge | 2.42e-11 | 1 |
primitive sex cord of indifferent gonad | 2.42e-11 | 1 |
coelomic epithelium | 2.42e-11 | 1 |
cavity lining | 3.67e-08 | 12 |
serous membrane | 3.67e-08 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.