FFCP PHASE1:Hg19::chr20:44638515..44638530,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C71|description=CAGE_peak_at_chr20:44638515..44638530,+|id=chr20:44638515..44638530,+|ontology_enrichment_celltype=CL:0000235!2.22e-38!10;CL:0000775!3.46e-15!3;CL:0000766!1.72e-12!76;CL:0002009!6.01e-12!65;CL:0000244!2.49e-11!4;CL:0000731!2.49e-11!4;CL:0000557!7.46e-11!71;CL:0000763!7.80e-10!112;CL:0000049!7.80e-10!112;CL:0002194!8.92e-10!63;CL:0000576!8.92e-10!63;CL:0000040!8.92e-10!63;CL:0000559!8.92e-10!63;CL:0000738!4.41e-09!140;CL:0000839!1.02e-08!70;CL:0000840!5.74e-08!5;CL:0001029!5.74e-08!5;CL:0000037!4.62e-07!172;CL:0000566!4.62e-07!172|ontology_enrichment_celltype_v019=CL:0000235;6.61e-168;6!CL:0000473;2.00e-22;39!CL:0000234;2.00e-22;39!CL:0000775;1.14e-10;3!CL:0000766;1.09e-09;69!CL:0000763;6.79e-07;100|ontology_enrichment_celltype_v019_2=CL:0000235,7.64e-168,6;CL:0000473,1.87e-21,48;CL:0000234,1.87e-21,48;CL:0000766,3.53e-19,72;CL:0002194,3.11e-17,59;CL:0000576,3.11e-17,59;CL:0000040,3.11e-17,59;CL:0000559,3.11e-17,59;CL:0002009,1.09e-16,61;CL:0000839,1.82e-15,66;CL:0000557,3.04e-15,67;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0000775,1.09e-10,3;CL:0000738,2.51e-10,136;CL:0002087,5.00e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.16e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177|ontology_enrichment_development_v019=CL:0000049;7.55e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.57e-13!102;UBERON:0003061!5.57e-13!102;UBERON:0001154!1.07e-11!1;UBERON:0001153!1.07e-11!1;UBERON:0002193!1.13e-11!112;UBERON:0002371!1.63e-09!80;UBERON:0002405!1.92e-09!115;UBERON:0000365!3.04e-09!5;UBERON:0001474!8.91e-09!86;UBERON:0005910!7.58e-08!6;UBERON:0004765!2.62e-07!101;UBERON:0001434!2.62e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-13,76;UBERON:0001474,1.55e-12,82;UBERON:0004765,1.86e-11,90;UBERON:0002405,4.26e-11,93;UBERON:0002390,1.51e-10,98;UBERON:0003061,1.51e-10,98;UBERON:0001434,2.42e-10,100;UBERON:0002193,1.35e-09,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20082107913617,3.7440682422278,11.1473371716546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,2.51128545716063,31.6250909224547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr20:44638515..44638530,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr20:44638515..44638530,+ | |||
|id=chr20:44638515..44638530,+ | |||
|ontology_enrichment_celltype=CL:0000235!2.22e-38!10;CL:0000775!3.46e-15!3;CL:0000766!1.72e-12!76;CL:0002009!6.01e-12!65;CL:0000244!2.49e-11!4;CL:0000731!2.49e-11!4;CL:0000557!7.46e-11!71;CL:0000763!7.80e-10!112;CL:0000049!7.80e-10!112;CL:0002194!8.92e-10!63;CL:0000576!8.92e-10!63;CL:0000040!8.92e-10!63;CL:0000559!8.92e-10!63;CL:0000738!4.41e-09!140;CL:0000839!1.02e-08!70;CL:0000840!5.74e-08!5;CL:0001029!5.74e-08!5;CL:0000037!4.62e-07!172;CL:0000566!4.62e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000235;6.61e-168;6!CL:0000473;2.00e-22;39!CL:0000234;2.00e-22;39!CL:0000775;1.14e-10;3!CL:0000766;1.09e-09;69!CL:0000763;6.79e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.64e-168,6;CL:0000473,1.87e-21,48;CL:0000234,1.87e-21,48;CL:0000766,3.53e-19,72;CL:0002194,3.11e-17,59;CL:0000576,3.11e-17,59;CL:0000040,3.11e-17,59;CL:0000559,3.11e-17,59;CL:0002009,1.09e-16,61;CL:0000839,1.82e-15,66;CL:0000557,3.04e-15,67;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0000775,1.09e-10,3;CL:0000738,2.51e-10,136;CL:0002087,5.00e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.16e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000049;7.55e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.57e-13!102;UBERON:0003061!5.57e-13!102;UBERON:0001154!1.07e-11!1;UBERON:0001153!1.07e-11!1;UBERON:0002193!1.13e-11!112;UBERON:0002371!1.63e-09!80;UBERON:0002405!1.92e-09!115;UBERON:0000365!3.04e-09!5;UBERON:0001474!8.91e-09!86;UBERON:0005910!7.58e-08!6;UBERON:0004765!2.62e-07!101;UBERON:0001434!2.62e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-13,76;UBERON:0001474,1.55e-12,82;UBERON:0004765,1.86e-11,90;UBERON:0002405,4.26e-11,93;UBERON:0002390,1.51e-10,98;UBERON:0003061,1.51e-10,98;UBERON:0001434,2.42e-10,100;UBERON:0002193,1.35e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20082107913617,3.7440682422278,11.1473371716546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,2.51128545716063,31.6250909224547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:44638515..44638530,+ | |||
}} |
Revision as of 08:46, 12 September 2013
Short description: | p@chr20:44638515..44638530, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:44638515..44638530, + |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.64e-168 | 6 |
defensive cell | 1.87e-21 | 48 |
phagocyte | 1.87e-21 | 48 |
myeloid leukocyte | 3.53e-19 | 72 |
monopoietic cell | 3.11e-17 | 59 |
monocyte | 3.11e-17 | 59 |
monoblast | 3.11e-17 | 59 |
promonocyte | 3.11e-17 | 59 |
macrophage dendritic cell progenitor | 1.09e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.82e-15 | 66 |
granulocyte monocyte progenitor cell | 3.04e-15 | 67 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
neutrophil | 1.09e-10 | 3 |
leukocyte | 2.51e-10 | 136 |
nongranular leukocyte | 5.00e-09 | 115 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 1.16e-08 | 120 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-13 | 76 |
bone element | 1.55e-12 | 82 |
skeletal element | 1.86e-11 | 90 |
immune system | 4.26e-11 | 93 |
hematopoietic system | 1.51e-10 | 98 |
blood island | 1.51e-10 | 98 |
skeletal system | 2.42e-10 | 100 |
hemolymphoid system | 1.35e-09 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.