FFCP PHASE1:Hg19::chr20:36718341..36718383,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=58490|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=16209|TSSclassifier=N|UniProt=Q69YY7|association_with_transcript=-121bp_to_AL117521_5end|coexpression_cluster_id=C5|description=CAGE_peak_14_at_RPRD1B_5end|id=chr20:36718341..36718383,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;4.05e-17;12!CL:0000047;2.59e-12;2!CL:0000346;1.21e-08;3!CL:1000428;1.21e-08;3|ontology_enrichment_celltype_v019_2=CL:0000182,4.53e-17,12;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3|ontology_enrichment_development_v019=UBERON:0000358;1.33e-23;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002171;3.28e-23;1!UBERON:0006518;3.28e-23;1!UBERON:0008949;3.28e-23;1!UBERON:0000101;3.28e-23;1!UBERON:0002167;3.28e-23;1!UBERON:0002107;5.80e-19;19!UBERON:0006925;5.80e-19;19!UBERON:0002423;1.58e-14;25!UBERON:0002365;3.54e-12;31!UBERON:0002330;3.54e-12;31!UBERON:0002368;7.41e-10;33!UBERON:0000412;1.21e-08;3!UBERON:0001992;1.21e-08;3!UBERON:0000949;2.50e-08;43|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.10e-23,1;UBERON:0006518,2.10e-23,1;UBERON:0008949,2.10e-23,1;UBERON:0000101,2.10e-23,1;UBERON:0002167,2.10e-23,1;UBERON:0002107,6.37e-19,19;UBERON:0006925,6.37e-19,19;UBERON:0008836,6.37e-19,19;UBERON:0008835,2.08e-16,22;UBERON:0003894,2.08e-16,22;UBERON:0009854,1.02e-15,23;UBERON:0007499,1.70e-14,25;UBERON:0009497,1.70e-14,25;UBERON:0000015,1.70e-14,25;UBERON:0002423,1.70e-14,25;UBERON:0006235,1.70e-14,25;UBERON:0004161,1.70e-14,25;UBERON:0009856,5.90e-14,26;UBERON:0002365,8.97e-12,31;UBERON:0002330,8.97e-12,31;UBERON:0002368,1.79e-10,35;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0000949,3.17e-08,45;UBERON:0003929,6.62e-07,54;UBERON:0005172,6.62e-07,54;UBERON:0005173,6.62e-07,54;UBERON:0005911,7.04e-07,82|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0.564727018627814,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.598390972864896,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.386521706326594,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0.966875596732978,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0.341380344856499,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0.113942055847001,0,0.269272933229316,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=58490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16209 | |||
|TSSclassifier=N | |||
|UniProt=Q69YY7 | |||
|association_with_transcript=-121bp_to_AL117521_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_14_at_RPRD1B_5end | |||
|id=chr20:36718341..36718383,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.05e-17;12!CL:0000047;2.59e-12;2!CL:0000346;1.21e-08;3!CL:1000428;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.53e-17,12;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.33e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.28e-23;1!UBERON:0006518;3.28e-23;1!UBERON:0008949;3.28e-23;1!UBERON:0000101;3.28e-23;1!UBERON:0002167;3.28e-23;1!UBERON:0002107;5.80e-19;19!UBERON:0006925;5.80e-19;19!UBERON:0002423;1.58e-14;25!UBERON:0002365;3.54e-12;31!UBERON:0002330;3.54e-12;31!UBERON:0002368;7.41e-10;33!UBERON:0000412;1.21e-08;3!UBERON:0001992;1.21e-08;3!UBERON:0000949;2.50e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.10e-23,1;UBERON:0006518,2.10e-23,1;UBERON:0008949,2.10e-23,1;UBERON:0000101,2.10e-23,1;UBERON:0002167,2.10e-23,1;UBERON:0002107,6.37e-19,19;UBERON:0006925,6.37e-19,19;UBERON:0008836,6.37e-19,19;UBERON:0008835,2.08e-16,22;UBERON:0003894,2.08e-16,22;UBERON:0009854,1.02e-15,23;UBERON:0007499,1.70e-14,25;UBERON:0009497,1.70e-14,25;UBERON:0000015,1.70e-14,25;UBERON:0002423,1.70e-14,25;UBERON:0006235,1.70e-14,25;UBERON:0004161,1.70e-14,25;UBERON:0009856,5.90e-14,26;UBERON:0002365,8.97e-12,31;UBERON:0002330,8.97e-12,31;UBERON:0002368,1.79e-10,35;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0000949,3.17e-08,45;UBERON:0003929,6.62e-07,54;UBERON:0005172,6.62e-07,54;UBERON:0005173,6.62e-07,54;UBERON:0005911,7.04e-07,82 | |||
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| |||
|short_description=p14@RPRD1B | |||
}} |
Revision as of 08:24, 12 September 2013
Short description: | p14@RPRD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_RPRD1B_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -121bp_to_AL117521_5end |
EntrezGene: | RPRD1B |
HGNC: | 16209 |
UniProt: | Q69YY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.53e-17 | 12 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.10e-23 | 1 |
right lung lobe | 2.10e-23 | 1 |
lower lobe of lung | 2.10e-23 | 1 |
lobe of lung | 2.10e-23 | 1 |
right lung | 2.10e-23 | 1 |
liver | 6.37e-19 | 19 |
digestive gland | 6.37e-19 | 19 |
liver bud | 6.37e-19 | 19 |
hepatic diverticulum | 2.08e-16 | 22 |
liver primordium | 2.08e-16 | 22 |
digestive tract diverticulum | 1.02e-15 | 23 |
epithelial sac | 1.70e-14 | 25 |
epithelium of foregut-midgut junction | 1.70e-14 | 25 |
anatomical boundary | 1.70e-14 | 25 |
hepatobiliary system | 1.70e-14 | 25 |
foregut-midgut junction | 1.70e-14 | 25 |
septum transversum | 1.70e-14 | 25 |
sac | 5.90e-14 | 26 |
exocrine gland | 8.97e-12 | 31 |
exocrine system | 8.97e-12 | 31 |
endocrine gland | 1.79e-10 | 35 |
dermal papilla | 1.12e-08 | 3 |
papillary layer of dermis | 1.12e-08 | 3 |
endocrine system | 3.17e-08 | 45 |
gut epithelium | 6.62e-07 | 54 |
abdomen element | 6.62e-07 | 54 |
abdominal segment element | 6.62e-07 | 54 |
endo-epithelium | 7.04e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.