FFCP PHASE1:Hg19::chr20:35580240..35580251,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25939|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15925|TSSclassifier=S|UniProt=Q9Y3Z3,Q59H15|association_with_transcript=0bp_to_ENST00000262878,NM_015474_5end|coexpression_cluster_id=C936|description=CAGE_peak_6_at_SAMHD1_5end|id=chr20:35580240..35580251,-|ontology_enrichment_celltype=CL:0000766!7.05e-28!76;CL:0002194!8.73e-28!63;CL:0000576!8.73e-28!63;CL:0000040!8.73e-28!63;CL:0000559!8.73e-28!63;CL:0002009!4.34e-27!65;CL:0000557!8.77e-27!71;CL:0000839!5.99e-25!70;CL:0000738!2.27e-21!140;CL:0002087!4.55e-21!119;CL:0002057!1.21e-19!42;CL:0000860!5.95e-19!45;CL:0002031!1.46e-18!124;CL:0000037!8.90e-17!172;CL:0000566!8.90e-17!172;CL:0000763!1.10e-16!112;CL:0000049!1.10e-16!112;CL:0002032!1.79e-14!165;CL:0000837!1.79e-14!165;CL:0000988!1.81e-13!182;CL:0000791!2.88e-09!18;CL:0000789!2.88e-09!18;CL:0002420!2.88e-09!18;CL:0002419!2.88e-09!18;CL:0000790!2.88e-09!18|ontology_enrichment_celltype_v019=CL:0000576;1.55e-19;48!CL:0000473;7.35e-19;39!CL:0000234;7.35e-19;39!CL:0000860;1.14e-15;33!CL:0002057;1.14e-15;33!CL:0000766;6.17e-15;69!CL:0000791;1.04e-11;18!CL:0000789;1.04e-11;18!CL:0002419;1.04e-11;18!CL:0002087;4.69e-09;104!CL:0000235;1.17e-08;6!CL:0000763;1.92e-08;100!CL:0000624;1.11e-07;6!CL:0002393;1.75e-07;6!CL:0002397;1.75e-07;6!CL:0000738;2.71e-07;136!CL:0000084;3.34e-07;25!CL:0000625;5.93e-07;11|ontology_enrichment_celltype_v019_2=CL:0002194,2.19e-40,59;CL:0000576,2.19e-40,59;CL:0000040,2.19e-40,59;CL:0000559,2.19e-40,59;CL:0002009,1.83e-38,61;CL:0000766,7.87e-38,72;CL:0000557,2.36e-35,67;CL:0002087,1.11e-34,115;CL:0000839,3.56e-34,66;CL:0000738,6.25e-34,136;CL:0000473,2.66e-32,48;CL:0000234,2.66e-32,48;CL:0000037,1.41e-29,168;CL:0002031,3.02e-28,120;CL:0000988,1.18e-26,177;CL:0000860,1.31e-25,42;CL:0002057,1.31e-25,42;CL:0000763,1.49e-25,108;CL:0000049,1.49e-25,108;CL:0002032,3.36e-25,161;CL:0000837,3.36e-25,161;CL:0000791,5.39e-12,18;CL:0000789,5.39e-12,18;CL:0002420,5.39e-12,18;CL:0002419,5.39e-12,18;CL:0000790,5.39e-12,18;CL:0002393,1.28e-09,9;CL:0002397,1.28e-09,9;CL:0000235,1.32e-08,6;CL:0000624,9.35e-08,6;CL:0000084,2.18e-07,25;CL:0000827,2.18e-07,25;CL:0000625,3.61e-07,11|ontology_enrichment_development_v019=CL:0002057;1.70e-18;42!CL:0000790;1.04e-11;18!CL:0000049;3.40e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.21e-27!102;UBERON:0003061!1.21e-27!102;UBERON:0002193!2.46e-25!112;UBERON:0007023!2.52e-22!115;UBERON:0002371!8.82e-22!80;UBERON:0001474!1.28e-19!86;UBERON:0002405!8.23e-17!115;UBERON:0004765!7.44e-14!101;UBERON:0001434!7.44e-14!101;UBERON:0001049!1.46e-08!57;UBERON:0005068!1.46e-08!57;UBERON:0006241!1.46e-08!57;UBERON:0007135!1.46e-08!57;UBERON:0003080!2.13e-07!42;UBERON:0002780!4.42e-07!41;UBERON:0001890!4.42e-07!41;UBERON:0006240!4.42e-07!41|ontology_enrichment_uberon_v019=UBERON:0000178;1.86e-10;15!UBERON:0000179;1.86e-10;15!UBERON:0000463;1.86e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.60e-40,98;UBERON:0003061,7.60e-40,98;UBERON:0002193,1.43e-36,108;UBERON:0002371,1.82e-30,76;UBERON:0002405,1.87e-27,93;UBERON:0001474,6.76e-27,82;UBERON:0004765,6.54e-23,90;UBERON:0001434,6.99e-19,100;UBERON:0003081,1.08e-12,203;UBERON:0007023,1.71e-11,114;UBERON:0000178,1.95e-10,15;UBERON:0000179,1.95e-10,15;UBERON:0000463,1.95e-10,15;UBERON:0002204,4.49e-07,167|phase1_expression=2.72517568905835,1.49870366723688,1.83240725324762,3.00219895059391,0.893922188854576,0,0,1.26343974685366,2.08948502559871,0,0,0,0.527533956456907,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.305653622991805,0,0,2.75354993794233,3.0706351847777,4.02521920621798,0,0,0,0.0774672005803016,0,2.93600439334847,2.21598163412751,2.60707781711184,5.64228263861215,1.34349284543955,3.88672399222775,1.03030227053675,1.30858414901608,1.88937971844405,1.69808842831471,1.62700325833979,0.411167888021826,0.929119112685311,8.63077176966451,5.12321413058201,4.02019790810595,1.37898272294647,1.29096936716765,0,1.31769637679823,0.545812300115692,1.12361742222542,3.97909060082173,0.962787081228281,0.639337125799041,13.1940520074686,8.17800996248691,11.5080682643827,3.77272010217159,0.56738522469114,1.86846674698672,5.27622197039161,2.08593167368081,3.04064382587163,6.05399502633369,2.57794345191295,5.69632297393592,7.39393502091796,4.25208599930087,3.77385561915077,5.72876018847125,7.0583139635508,6.91120022797445,1.42506371870624,1.59133341759272,3.28795476776341,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,6.05783394982677,3.93419540227666,7.07419372948497,3.08402248499264,2.00623794468814,8.14805666583976,3.31413464014313,11.6896037044747,1.22551502573691,2.94605907474837,2.65840673500345,1.89562704635511,2.68991771423918,1.95089021339817,1.80881695064044,3.59255023121603,2.89803085735052,8.45233410023744,10.4340922954988,6.27213142829861,3.05935225283429,3.83220493601921,3.77990190030893,2.277177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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25939 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15925 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y3Z3,Q59H15 | |||
|association_with_transcript=0bp_to_ENST00000262878,NM_015474_5end | |||
|coexpression_cluster_id=C936 | |||
|description=CAGE_peak_6_at_SAMHD1_5end | |||
|id=chr20:35580240..35580251,- | |||
|ontology_enrichment_celltype=CL:0000766!7.05e-28!76;CL:0002194!8.73e-28!63;CL:0000576!8.73e-28!63;CL:0000040!8.73e-28!63;CL:0000559!8.73e-28!63;CL:0002009!4.34e-27!65;CL:0000557!8.77e-27!71;CL:0000839!5.99e-25!70;CL:0000738!2.27e-21!140;CL:0002087!4.55e-21!119;CL:0002057!1.21e-19!42;CL:0000860!5.95e-19!45;CL:0002031!1.46e-18!124;CL:0000037!8.90e-17!172;CL:0000566!8.90e-17!172;CL:0000763!1.10e-16!112;CL:0000049!1.10e-16!112;CL:0002032!1.79e-14!165;CL:0000837!1.79e-14!165;CL:0000988!1.81e-13!182;CL:0000791!2.88e-09!18;CL:0000789!2.88e-09!18;CL:0002420!2.88e-09!18;CL:0002419!2.88e-09!18;CL:0000790!2.88e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.55e-19;48!CL:0000473;7.35e-19;39!CL:0000234;7.35e-19;39!CL:0000860;1.14e-15;33!CL:0002057;1.14e-15;33!CL:0000766;6.17e-15;69!CL:0000791;1.04e-11;18!CL:0000789;1.04e-11;18!CL:0002419;1.04e-11;18!CL:0002087;4.69e-09;104!CL:0000235;1.17e-08;6!CL:0000763;1.92e-08;100!CL:0000624;1.11e-07;6!CL:0002393;1.75e-07;6!CL:0002397;1.75e-07;6!CL:0000738;2.71e-07;136!CL:0000084;3.34e-07;25!CL:0000625;5.93e-07;11 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.70e-18;42!CL:0000790;1.04e-11;18!CL:0000049;3.40e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-27!102;UBERON:0003061!1.21e-27!102;UBERON:0002193!2.46e-25!112;UBERON:0007023!2.52e-22!115;UBERON:0002371!8.82e-22!80;UBERON:0001474!1.28e-19!86;UBERON:0002405!8.23e-17!115;UBERON:0004765!7.44e-14!101;UBERON:0001434!7.44e-14!101;UBERON:0001049!1.46e-08!57;UBERON:0005068!1.46e-08!57;UBERON:0006241!1.46e-08!57;UBERON:0007135!1.46e-08!57;UBERON:0003080!2.13e-07!42;UBERON:0002780!4.42e-07!41;UBERON:0001890!4.42e-07!41;UBERON:0006240!4.42e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.86e-10;15!UBERON:0000179;1.86e-10;15!UBERON:0000463;1.86e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.60e-40,98;UBERON:0003061,7.60e-40,98;UBERON:0002193,1.43e-36,108;UBERON:0002371,1.82e-30,76;UBERON:0002405,1.87e-27,93;UBERON:0001474,6.76e-27,82;UBERON:0004765,6.54e-23,90;UBERON:0001434,6.99e-19,100;UBERON:0003081,1.08e-12,203;UBERON:0007023,1.71e-11,114;UBERON:0000178,1.95e-10,15;UBERON:0000179,1.95e-10,15;UBERON:0000463,1.95e-10,15;UBERON:0002204,4.49e-07,167 | |||
|phase1_expression=2.72517568905835,1.49870366723688,1.83240725324762,3.00219895059391,0.893922188854576,0,0,1.26343974685366,2.08948502559871,0,0,0,0.527533956456907,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.305653622991805,0,0,2.75354993794233,3.0706351847777,4.02521920621798,0,0,0,0.0774672005803016,0,2.93600439334847,2.21598163412751,2.60707781711184,5.64228263861215,1.34349284543955,3.88672399222775,1.03030227053675,1.30858414901608,1.88937971844405,1.69808842831471,1.62700325833979,0.411167888021826,0.929119112685311,8.63077176966451,5.12321413058201,4.02019790810595,1.37898272294647,1.29096936716765,0,1.31769637679823,0.545812300115692,1.12361742222542,3.97909060082173,0.962787081228281,0.639337125799041,13.1940520074686,8.17800996248691,11.5080682643827,3.77272010217159,0.56738522469114,1.86846674698672,5.27622197039161,2.08593167368081,3.04064382587163,6.05399502633369,2.57794345191295,5.69632297393592,7.39393502091796,4.25208599930087,3.77385561915077,5.72876018847125,7.0583139635508,6.91120022797445,1.42506371870624,1.59133341759272,3.28795476776341,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,6.05783394982677,3.93419540227666,7.07419372948497,3.08402248499264,2.00623794468814,8.14805666583976,3.31413464014313,11.6896037044747,1.22551502573691,2.94605907474837,2.65840673500345,1.89562704635511,2.68991771423918,1.95089021339817,1.80881695064044,3.59255023121603,2.89803085735052,8.45233410023744,10.4340922954988,6.27213142829861,3.05935225283429,3.83220493601921,3.77990190030893,2.27717722817553,1.27426165729639,3.25541726928209,2.85135613334512,8.58278178743305,6.39933055772092,2.49861453104692,1.89421801635213,1.64225599384209,0.604820229674197,0.534880391567015,2.31719046212478,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.851363990735132,0,0,3.8945687238562,7.66170844116776,5.45127638127347,11.9245312152671,13.7278778587231,10.0293525358983,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,2.63560834872127,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0.484938170456436,0,0,0,0,0.272746120590835,0,0.365921118388786,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,5.57241513638375,2.16563844500876,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0.858486162094873,4.18568910348575,8.42415354501256,7.58018927672514,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.829312462163088,0.576479813667846,0.12624243342638,0.190493682876507,1.14596527667483,4.68869788840188,0,0.925447434329912,0.600686115687835,1.14330573052231,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,7.29742683847143,7.03159928004977,8.43335757932127,0,0,0,0.144781306667579,0,0,0.112085143993527,1.18218456121156,1.94064817373566,2.31017465303547,0,0,0,0.502548796003046,0,0.749007023947182,0,2.07207756718018,0.24538298343828,0,0.271265023699736,0.623912584592421,0.356857977594324,0.315404830067869,0.468565659970853,0,0,2.0694614258501,0,0,0.173767228936166,0,0,4.34212854858063,7.98142543028882,5.12292277456533,0,0,0,0.248107807818777,0,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,1.13733384070897,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70599442741899,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0.43050537267123,0,0,0,6.5968189200182,5.35246044999663,1.13929437434833,6.19402616190251,9.87269455406866,4.53931317834902,2.70015718619057,3.96562588147135,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0.383010740264733,0,0,0.280797178113459,1.36940807419915,0.156679895773023,0,0,2.08764497634809,3.43059502224781,46.8430861459359,0,6.75929681478608,7.60498766834214,7.34136223532397,0,0.278406173895242,0,0,0,0,0,4.24873719888493,0,0,0,0,0.593929361665277,0,3.97659059106519,1.68803299692615,0.111308705022906,0,0,0.796991953004279,0.828851746593443,0,0.102268682502155,0.123084805461069,0.311039587661807,0.179736702294654,0,3.5810065915881,1.08507746200627,9.57932369387759,0,0.969332746095218,0.64937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| |||
|short_description=p6@SAMHD1 | |||
}} |
Revision as of 08:20, 12 September 2013
Short description: | p6@SAMHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SAMHD1_5end |
Coexpression cluster: | C936_CD4_CD14_granulocyte_CD14CD16_CD8_Dendritic_Hair |
Association with transcript: | 0bp_to_ENST00000262878, NM_015474_5end |
EntrezGene: | SAMHD1 |
HGNC: | 15925 |
UniProt: | Q9Y3Z3Q59H15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.60e-40 | 98 |
blood island | 7.60e-40 | 98 |
hemolymphoid system | 1.43e-36 | 108 |
bone marrow | 1.82e-30 | 76 |
immune system | 1.87e-27 | 93 |
bone element | 6.76e-27 | 82 |
skeletal element | 6.54e-23 | 90 |
skeletal system | 6.99e-19 | 100 |
lateral plate mesoderm | 1.08e-12 | 203 |
adult organism | 1.71e-11 | 114 |
blood | 1.95e-10 | 15 |
haemolymphatic fluid | 1.95e-10 | 15 |
organism substance | 1.95e-10 | 15 |
musculoskeletal system | 4.49e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.