FFCP PHASE1:Hg19::chr20:30184133..30184150,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr20:30184133..30184150,+|id=chr20:30184133..30184150,+|ontology_enrichment_celltype=CL:0002150!2.69e-07!3;CL:0000861!2.69e-07!3|ontology_enrichment_celltype_v019=CL:0002593;1.51e-09;2!CL:0000188;2.96e-08;9!CL:0000515;6.32e-07;3|ontology_enrichment_celltype_v019_2=CL:0002593,2.02e-09,2;CL:0000188,3.18e-08,9|ontology_enrichment_development_v019=UBERON:0003099;9.48e-18;1!UBERON:0003852;9.48e-18;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.09e-16!9;UBERON:0001557!9.32e-07!19|ontology_enrichment_uberon_v019=UBERON:0005705;9.48e-18;1!UBERON:0008193;9.48e-18;1!UBERON:0010912;9.48e-18;1!UBERON:0002514;9.48e-18;1!UBERON:0003457;9.48e-18;1!UBERON:0008907;9.48e-18;1!UBERON:0008001;9.48e-18;1!UBERON:0007213;9.48e-18;1!UBERON:0009891;9.48e-18;1!UBERON:0007914;9.48e-18;1!UBERON:0007375;9.48e-18;1!UBERON:0003323;9.48e-18;1!UBERON:0010258;9.48e-18;1!UBERON:0005253;9.48e-18;1!UBERON:0007842;9.48e-18;1!UBERON:0002397;9.48e-18;1!UBERON:0003113;9.48e-18;1!UBERON:0003277;9.48e-18;1!UBERON:0001709;9.48e-18;1!UBERON:0002244;9.48e-18;1!UBERON:0005620;9.48e-18;1!UBERON:0010364;9.48e-18;1!UBERON:0004288;9.48e-18;1!UBERON:0001134;5.99e-10;16!UBERON:0002036;5.99e-10;16!UBERON:0002456;1.51e-09;2!UBERON:0004089;1.51e-09;2!UBERON:0001737;2.96e-08;9!UBERON:0001557;2.96e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0005705,5.26e-18,1;UBERON:0008193,5.26e-18,1;UBERON:0010912,5.26e-18,1;UBERON:0002514,5.26e-18,1;UBERON:0003457,5.26e-18,1;UBERON:0008907,5.26e-18,1;UBERON:0008001,5.26e-18,1;UBERON:0007213,5.26e-18,1;UBERON:0009891,5.26e-18,1;UBERON:0007914,5.26e-18,1;UBERON:0009292,5.26e-18,1;UBERON:0003099,5.26e-18,1;UBERON:0007375,5.26e-18,1;UBERON:0003323,5.26e-18,1;UBERON:0010258,5.26e-18,1;UBERON:0007842,5.26e-18,1;UBERON:0009494,5.26e-18,1;UBERON:0010042,5.26e-18,1;UBERON:0010045,5.26e-18,1;UBERON:0010259,5.26e-18,1;UBERON:0010359,5.26e-18,1;UBERON:0009526,5.26e-18,1;UBERON:0002397,5.26e-18,1;UBERON:0003113,5.26e-18,1;UBERON:0003277,5.26e-18,1;UBERON:0001709,5.26e-18,1;UBERON:0004066,5.26e-18,1;UBERON:0002244,5.26e-18,1;UBERON:0005620,5.26e-18,1;UBERON:0004362,5.26e-18,1;UBERON:0010364,5.26e-18,1;UBERON:0010046,5.26e-18,1;UBERON:0005868,5.26e-18,1;UBERON:0007238,5.26e-18,1;UBERON:0004288,5.26e-18,1;UBERON:0004068,5.26e-18,1;UBERON:0010334,5.26e-18,1;UBERON:0003852,5.26e-18,1;UBERON:0010253,5.26e-18,1;UBERON:0005253,1.12e-09,2;UBERON:0004089,1.12e-09,2;UBERON:0002456,2.02e-09,2;UBERON:0001737,2.75e-08,9|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0.653847612453835,0,0,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0,0,0.600182192168805,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,1.20505514941741,0.772057809126758,0.871517776369625,0.474541238222193,0.808987848960987,0.588664395376038,1.53898862778556,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,2.4657158706046,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,1.3864375540318,1.07452572308291,0,0,0.580066775656914,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51566461351621,2.11959019549938,2.29923279748986,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0.458320848023367,0,0,0.429226048136571,0,0,0,0,0.472699093843342,0.576911008668165,0.404421263125109,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.74627401443437,0.701139929541673,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,1.09109195521536,0.322231671127465,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0.512483037175893,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0.630832124175395,0.218531143927391,0.253397002022874,0,0.534434810531121,0.643264296743914,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0|short_description=p@chr20:30184133..30184150,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:30184133..30184150,+ | |||
|id=chr20:30184133..30184150,+ | |||
|ontology_enrichment_celltype=CL:0002150!2.69e-07!3;CL:0000861!2.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002593;1.51e-09;2!CL:0000188;2.96e-08;9!CL:0000515;6.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,2.02e-09,2;CL:0000188,3.18e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0003099;9.48e-18;1!UBERON:0003852;9.48e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.09e-16!9;UBERON:0001557!9.32e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;9.48e-18;1!UBERON:0008193;9.48e-18;1!UBERON:0010912;9.48e-18;1!UBERON:0002514;9.48e-18;1!UBERON:0003457;9.48e-18;1!UBERON:0008907;9.48e-18;1!UBERON:0008001;9.48e-18;1!UBERON:0007213;9.48e-18;1!UBERON:0009891;9.48e-18;1!UBERON:0007914;9.48e-18;1!UBERON:0007375;9.48e-18;1!UBERON:0003323;9.48e-18;1!UBERON:0010258;9.48e-18;1!UBERON:0005253;9.48e-18;1!UBERON:0007842;9.48e-18;1!UBERON:0002397;9.48e-18;1!UBERON:0003113;9.48e-18;1!UBERON:0003277;9.48e-18;1!UBERON:0001709;9.48e-18;1!UBERON:0002244;9.48e-18;1!UBERON:0005620;9.48e-18;1!UBERON:0010364;9.48e-18;1!UBERON:0004288;9.48e-18;1!UBERON:0001134;5.99e-10;16!UBERON:0002036;5.99e-10;16!UBERON:0002456;1.51e-09;2!UBERON:0004089;1.51e-09;2!UBERON:0001737;2.96e-08;9!UBERON:0001557;2.96e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,5.26e-18,1;UBERON:0008193,5.26e-18,1;UBERON:0010912,5.26e-18,1;UBERON:0002514,5.26e-18,1;UBERON:0003457,5.26e-18,1;UBERON:0008907,5.26e-18,1;UBERON:0008001,5.26e-18,1;UBERON:0007213,5.26e-18,1;UBERON:0009891,5.26e-18,1;UBERON:0007914,5.26e-18,1;UBERON:0009292,5.26e-18,1;UBERON:0003099,5.26e-18,1;UBERON:0007375,5.26e-18,1;UBERON:0003323,5.26e-18,1;UBERON:0010258,5.26e-18,1;UBERON:0007842,5.26e-18,1;UBERON:0009494,5.26e-18,1;UBERON:0010042,5.26e-18,1;UBERON:0010045,5.26e-18,1;UBERON:0010259,5.26e-18,1;UBERON:0010359,5.26e-18,1;UBERON:0009526,5.26e-18,1;UBERON:0002397,5.26e-18,1;UBERON:0003113,5.26e-18,1;UBERON:0003277,5.26e-18,1;UBERON:0001709,5.26e-18,1;UBERON:0004066,5.26e-18,1;UBERON:0002244,5.26e-18,1;UBERON:0005620,5.26e-18,1;UBERON:0004362,5.26e-18,1;UBERON:0010364,5.26e-18,1;UBERON:0010046,5.26e-18,1;UBERON:0005868,5.26e-18,1;UBERON:0007238,5.26e-18,1;UBERON:0004288,5.26e-18,1;UBERON:0004068,5.26e-18,1;UBERON:0010334,5.26e-18,1;UBERON:0003852,5.26e-18,1;UBERON:0010253,5.26e-18,1;UBERON:0005253,1.12e-09,2;UBERON:0004089,1.12e-09,2;UBERON:0002456,2.02e-09,2;UBERON:0001737,2.75e-08,9 | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0.653847612453835,0,0,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0,0,0.600182192168805,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,1.20505514941741,0.772057809126758,0.871517776369625,0.474541238222193,0.808987848960987,0.588664395376038,1.53898862778556,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,2.4657158706046,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,1.3864375540318,1.07452572308291,0,0,0.580066775656914,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51566461351621,2.11959019549938,2.29923279748986,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0.458320848023367,0,0,0.429226048136571,0,0,0,0,0.472699093843342,0.576911008668165,0.404421263125109,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.74627401443437,0.701139929541673,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,1.09109195521536,0.322231671127465,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0.512483037175893,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0.630832124175395,0.218531143927391,0.253397002022874,0,0.534434810531121,0.643264296743914,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr20:30184133..30184150,+ | |||
}} |
Revision as of 07:56, 12 September 2013
Short description: | p@chr20:30184133..30184150, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:30184133..30184150, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
cell of skeletal muscle | 3.18e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.