FFCP PHASE1:Hg19::chr20:17949143..17949183,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14969 | |||
|TSSclassifier=S | |||
|UniProt=Q5QPE4,Q9Y5X3 | |||
|association_with_transcript=0bp_to_ENST00000419004,NM_014426,uc002wqc.2,uc010gcn.1,uc010zrt.1_5end | |||
|description=CAGE_peak_2_at_SNX5_5end | |||
|id=chr20:17949143..17949183,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-23!115;UBERON:0001049!7.99e-10!57;UBERON:0005068!7.99e-10!57;UBERON:0006241!7.99e-10!57;UBERON:0007135!7.99e-10!57;UBERON:0000955!7.66e-09!69;UBERON:0006238!7.66e-09!69;UBERON:0002616!2.54e-08!59;UBERON:0003080!6.60e-08!42;UBERON:0002780!1.63e-07!41;UBERON:0001890!1.63e-07!41;UBERON:0006240!1.63e-07!41;UBERON:0001017!1.86e-07!82;UBERON:0005743!2.94e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.27e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.43e-23,114;UBERON:0001049,1.98e-09,56;UBERON:0005068,1.98e-09,56;UBERON:0006241,1.98e-09,56;UBERON:0007135,1.98e-09,56;UBERON:0000955,1.74e-08,68;UBERON:0006238,1.74e-08,68;UBERON:0000073,2.34e-08,53;UBERON:0002616,2.34e-08,53;UBERON:0002780,1.63e-07,41;UBERON:0001890,1.63e-07,41;UBERON:0003080,1.63e-07,41;UBERON:0006240,1.63e-07,41;UBERON:0001017,3.87e-07,81 | |||
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| |||
|short_description=p2@SNX5 | |||
}} |
Revision as of 07:36, 12 September 2013
Short description: | p2@SNX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SNX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000419004, NM_014426, uc002wqc.2, uc010gcn.1, uc010zrt.1_5end |
EntrezGene: | SNX5 |
HGNC: | 14969 |
UniProt: | Q5QPE4Q9Y5X3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.43e-23 | 114 |
neural tube | 1.98e-09 | 56 |
neural rod | 1.98e-09 | 56 |
future spinal cord | 1.98e-09 | 56 |
neural keel | 1.98e-09 | 56 |
brain | 1.74e-08 | 68 |
future brain | 1.74e-08 | 68 |
regional part of nervous system | 2.34e-08 | 53 |
regional part of brain | 2.34e-08 | 53 |
regional part of forebrain | 1.63e-07 | 41 |
forebrain | 1.63e-07 | 41 |
anterior neural tube | 1.63e-07 | 41 |
future forebrain | 1.63e-07 | 41 |
central nervous system | 3.87e-07 | 81 |
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