FFCP PHASE1:Hg19::chr1:98520013..98520035,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:98520013..98520035,+|id=chr1:98520013..98520035,+|ontology_enrichment_celltype=CL:0002319!1.35e-09!25;CL:0000128!6.31e-09!7;CL:0000126!6.31e-09!7;CL:0000127!6.31e-09!7;CL:0002453!6.31e-09!7;CL:0000243!6.50e-09!15;CL:0000125!6.50e-09!15;CL:0000030!6.50e-09!15;CL:0000339!6.50e-09!15;CL:0000076!1.03e-07!62;CL:0000095!1.03e-07!17;CL:0000123!1.03e-07!17;CL:0000066!1.93e-07!254;CL:0002605!8.69e-07!3|ontology_enrichment_celltype_v019=CL:0002605;3.98e-18;3!CL:0000243;7.48e-16;15!CL:0000125;7.48e-16;15!CL:0000095;4.35e-14;17!CL:0000128;1.61e-13;7!CL:0000126;1.61e-13;7!CL:0000127;1.61e-13;7!CL:0002319;1.22e-09;25!CL:0002573;6.41e-09;2!CL:1001319;9.50e-07;1!CL:1000600;9.50e-07;1|ontology_enrichment_celltype_v019_2=CL:0002605,4.88e-18,3;CL:0000243,6.70e-16,15;CL:0000125,6.70e-16,15;CL:0000030,6.70e-16,15;CL:0000339,6.70e-16,15;CL:0000095,3.94e-14,17;CL:0000123,3.94e-14,17;CL:0000128,1.83e-13,7;CL:0000126,1.83e-13,7;CL:0000127,1.83e-13,7;CL:0002453,1.83e-13,7;CL:0000333,1.91e-11,41;CL:0002319,1.14e-09,25;CL:0000133,3.67e-09,59;CL:0002573,6.42e-09,2;CL:0000221,3.38e-07,72;CL:1001319,6.02e-07,1;CL:1000600,6.02e-07,1|ontology_enrichment_development_v019=CL:0000339;7.48e-16;15!CL:0000133;6.61e-07;59|ontology_enrichment_disease=DOID:1749!6.57e-12!14;DOID:305!2.04e-08!106;DOID:0050687!6.67e-07!143|ontology_enrichment_disease_v019=DOID:6193;9.50e-07;1!DOID:5662;9.50e-07;1|ontology_enrichment_disease_v019_2=DOID:0050687,4.85e-10,143;DOID:305,7.96e-09,106;DOID:14566,1.74e-07,239;DOID:5662,6.76e-07,1|ontology_enrichment_uberon=UBERON:0002066!3.80e-08!5;UBERON:0000477!6.03e-08!286;UBERON:0000483!1.05e-07!309;UBERON:0000119!1.77e-07!312;UBERON:0000025!4.62e-07!194;UBERON:0004111!7.47e-07!241|ontology_enrichment_uberon_v019=UBERON:0000007;7.66e-12;2!UBERON:0000010;1.47e-10;8!UBERON:0002294;1.23e-07;7!UBERON:0001173;1.23e-07;7!UBERON:0004645;9.50e-07;1!UBERON:0004913;9.50e-07;1!UBERON:0003703;9.50e-07;1!UBERON:0001256;9.50e-07;1!UBERON:0001259;9.50e-07;1!UBERON:0001174;9.50e-07;1!UBERON:0004914;9.50e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.49e-12,2;UBERON:0000010,1.75e-10,8;UBERON:0005911,1.65e-07,82;UBERON:0004645,6.02e-07,1;UBERON:0001256,6.02e-07,1;UBERON:0001259,6.02e-07,1;UBERON:0004913,6.38e-07,1;UBERON:0003703,6.38e-07,1;UBERON:0001174,6.38e-07,1;UBERON:0004914,6.38e-07,1|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,4.29353980696585,3.01123735160345,3.13856598987007,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0.516833518338658,0,1.33888245105868,0,0,0,0.367663080345869,0,1.51809538082936,0.44905874525234,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970884173996107,0,0,0,0,0,0,0.140669416410513,3.33926115068718,0.329607748453519,0,0,0,0,3.1703291575668,0,0,2.60618218327248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,15.0523835311138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0,1.20238230377301,0,0,0,0,0,0,3.47907099583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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:98520013..98520035,+ | |||
|id=chr1:98520013..98520035,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.35e-09!25;CL:0000128!6.31e-09!7;CL:0000126!6.31e-09!7;CL:0000127!6.31e-09!7;CL:0002453!6.31e-09!7;CL:0000243!6.50e-09!15;CL:0000125!6.50e-09!15;CL:0000030!6.50e-09!15;CL:0000339!6.50e-09!15;CL:0000076!1.03e-07!62;CL:0000095!1.03e-07!17;CL:0000123!1.03e-07!17;CL:0000066!1.93e-07!254;CL:0002605!8.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.98e-18;3!CL:0000243;7.48e-16;15!CL:0000125;7.48e-16;15!CL:0000095;4.35e-14;17!CL:0000128;1.61e-13;7!CL:0000126;1.61e-13;7!CL:0000127;1.61e-13;7!CL:0002319;1.22e-09;25!CL:0002573;6.41e-09;2!CL:1001319;9.50e-07;1!CL:1000600;9.50e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.88e-18,3;CL:0000243,6.70e-16,15;CL:0000125,6.70e-16,15;CL:0000030,6.70e-16,15;CL:0000339,6.70e-16,15;CL:0000095,3.94e-14,17;CL:0000123,3.94e-14,17;CL:0000128,1.83e-13,7;CL:0000126,1.83e-13,7;CL:0000127,1.83e-13,7;CL:0002453,1.83e-13,7;CL:0000333,1.91e-11,41;CL:0002319,1.14e-09,25;CL:0000133,3.67e-09,59;CL:0002573,6.42e-09,2;CL:0000221,3.38e-07,72;CL:1001319,6.02e-07,1;CL:1000600,6.02e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000339;7.48e-16;15!CL:0000133;6.61e-07;59 | |||
|ontology_enrichment_disease=DOID:1749!6.57e-12!14;DOID:305!2.04e-08!106;DOID:0050687!6.67e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:6193;9.50e-07;1!DOID:5662;9.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.85e-10,143;DOID:305,7.96e-09,106;DOID:14566,1.74e-07,239;DOID:5662,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002066!3.80e-08!5;UBERON:0000477!6.03e-08!286;UBERON:0000483!1.05e-07!309;UBERON:0000119!1.77e-07!312;UBERON:0000025!4.62e-07!194;UBERON:0004111!7.47e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.66e-12;2!UBERON:0000010;1.47e-10;8!UBERON:0002294;1.23e-07;7!UBERON:0001173;1.23e-07;7!UBERON:0004645;9.50e-07;1!UBERON:0004913;9.50e-07;1!UBERON:0003703;9.50e-07;1!UBERON:0001256;9.50e-07;1!UBERON:0001259;9.50e-07;1!UBERON:0001174;9.50e-07;1!UBERON:0004914;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.49e-12,2;UBERON:0000010,1.75e-10,8;UBERON:0005911,1.65e-07,82;UBERON:0004645,6.02e-07,1;UBERON:0001256,6.02e-07,1;UBERON:0001259,6.02e-07,1;UBERON:0004913,6.38e-07,1;UBERON:0003703,6.38e-07,1;UBERON:0001174,6.38e-07,1;UBERON:0004914,6.38e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,4.29353980696585,3.01123735160345,3.13856598987007,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0.516833518338658,0,1.33888245105868,0,0,0,0.367663080345869,0,1.51809538082936,0.44905874525234,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970884173996107,0,0,0,0,0,0,0.140669416410513,3.33926115068718,0.329607748453519,0,0,0,0,3.1703291575668,0,0,2.60618218327248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,15.0523835311138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0,1.20238230377301,0,0,0,0,0,0,3.47907099583211,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.825236619583403,0.83088067605837,0,0,0.121499113316049,0,0,0,0,0,4.2221343410278,0,0,0,0,0,0,1.19730191562487,0,0.340776043570843,0,0,0,0.387848869084652,0,0,1.40963004463334,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,1.99968652739371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,1.13503190713367,0,0,0,0,1.07824811396682,0,7.863093949825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0.163771917510097,1.77427303460454,0,0,0,0,0,0,0,0,0.127762427639595,0,0,1.21393120847326,1.59363533945908,0,0,1.71488009437418,0,0,0,0.667388411352415,0,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,5.32494003287544,9.20304771398903,0,0.4582137370881,0,0,0.782988022584546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0.178553938605658,1.05868461514708,1.28386186702669,0,0,0,0,0,0,0,0,0,0,6.05598839208379,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,3.47608773999902,0,0,0,0,0,0,0,1.95367844666339,12.7005541594481,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p@chr1:98520013..98520035,+ | |||
}} |
Revision as of 07:24, 12 September 2013
Short description: | p@chr1:98520013..98520035, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:98520013..98520035, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.88e-18 | 3 |
glial cell (sensu Vertebrata) | 6.70e-16 | 15 |
glial cell | 6.70e-16 | 15 |
glioblast | 6.70e-16 | 15 |
glioblast (sensu Vertebrata) | 6.70e-16 | 15 |
neuron associated cell | 3.94e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 3.94e-14 | 17 |
oligodendrocyte | 1.83e-13 | 7 |
macroglial cell | 1.83e-13 | 7 |
astrocyte | 1.83e-13 | 7 |
oligodendrocyte precursor cell | 1.83e-13 | 7 |
migratory neural crest cell | 1.91e-11 | 41 |
neural cell | 1.14e-09 | 25 |
neurectodermal cell | 3.67e-09 | 59 |
Schwann cell | 6.42e-09 | 2 |
ectodermal cell | 3.38e-07 | 72 |
bladder cell | 6.02e-07 | 1 |
lower urinary tract cell | 6.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.49e-12 | 2 |
peripheral nervous system | 1.75e-10 | 8 |
endo-epithelium | 1.65e-07 | 82 |
urinary bladder urothelium | 6.02e-07 | 1 |
wall of urinary bladder | 6.02e-07 | 1 |
mucosa of urinary bladder | 6.02e-07 | 1 |
hepatopancreatic ampulla | 6.38e-07 | 1 |
extrahepatic bile duct | 6.38e-07 | 1 |
common bile duct | 6.38e-07 | 1 |
duodenal papilla | 6.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.85e-10 | 143 |
carcinoma | 7.96e-09 | 106 |
disease of cellular proliferation | 1.74e-07 | 239 |
pleomorphic carcinoma | 6.76e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.