FFCP PHASE1:Hg19::chr1:9811677..9811688,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22883|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17447|TSSclassifier=S|UniProt=|association_with_transcript=-38bp_to_ENST00000435891_5end|description=CAGE_peak_9_at_CLSTN1_5end|id=chr1:9811677..9811688,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;9.76e-16;3|ontology_enrichment_celltype_v019_2=CL:0002615,1.77e-15,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!4.41e-14!59;UBERON:0001049!1.37e-13!57;UBERON:0005068!1.37e-13!57;UBERON:0006241!1.37e-13!57;UBERON:0007135!1.37e-13!57;UBERON:0000955!9.51e-13!69;UBERON:0006238!9.51e-13!69;UBERON:0000956!5.83e-11!25;UBERON:0000203!5.83e-11!25;UBERON:0001017!6.85e-11!82;UBERON:0002619!8.96e-11!22;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0005743!2.37e-10!86;UBERON:0001893!3.92e-10!34;UBERON:0002791!5.19e-10!33;UBERON:0002780!7.37e-10!41;UBERON:0001890!7.37e-10!41;UBERON:0006240!7.37e-10!41;UBERON:0002346!1.34e-09!90;UBERON:0000153!1.43e-09!129;UBERON:0007811!1.43e-09!129;UBERON:0003075!1.63e-09!86;UBERON:0007284!1.63e-09!86;UBERON:0003080!2.13e-09!42;UBERON:0000033!2.35e-09!123;UBERON:0001869!2.66e-09!32;UBERON:0001950!2.97e-09!20;UBERON:0007023!8.15e-09!115;UBERON:0000073!1.91e-08!94;UBERON:0001016!1.91e-08!94;UBERON:0000477!1.20e-07!286;UBERON:0000064!1.21e-07!219;UBERON:0003056!9.33e-07!61|ontology_enrichment_uberon_v019=UBERON:0002702;4.35e-23;2!UBERON:0000200;2.00e-17;6!UBERON:0001870;9.76e-16;3!UBERON:0001950;3.23e-13;20!UBERON:0002619;4.63e-12;22!UBERON:0000956;1.17e-10;25!UBERON:0000203;1.17e-10;25!UBERON:0003688;2.51e-08;6!UBERON:0002358;2.51e-08;6!UBERON:0003684;2.51e-08;6!UBERON:0001178;2.51e-08;6!UBERON:0002791;2.64e-08;32!UBERON:0001869;2.64e-08;32!UBERON:0001871;2.22e-07;6!UBERON:0003528;3.71e-07;34!UBERON:0002020;3.71e-07;34!UBERON:0002771;4.55e-07;2!UBERON:0001893;5.30e-07;34!UBERON:0001905;7.60e-07;2!UBERON:0002757;7.60e-07;2!UBERON:0010134;7.60e-07;2!UBERON:0005408;7.60e-07;2!UBERON:0001899;7.60e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002702,3.49e-23,2;UBERON:0000200,1.80e-17,6;UBERON:0001870,8.44e-16,3;UBERON:0001950,3.89e-13,20;UBERON:0002619,5.47e-12,22;UBERON:0000956,1.35e-10,25;UBERON:0000203,1.35e-10,25;UBERON:0000073,2.10e-09,53;UBERON:0002616,2.10e-09,53;UBERON:0002780,4.27e-09,41;UBERON:0001890,4.27e-09,41;UBERON:0003080,4.27e-09,41;UBERON:0006240,4.27e-09,41;UBERON:0001049,7.12e-09,56;UBERON:0005068,7.12e-09,56;UBERON:0006241,7.12e-09,56;UBERON:0007135,7.12e-09,56;UBERON:0002791,2.52e-08,32;UBERON:0001869,2.52e-08,32;UBERON:0003688,3.37e-08,6;UBERON:0002358,3.37e-08,6;UBERON:0003684,3.37e-08,6;UBERON:0001178,3.37e-08,6;UBERON:0003528,7.67e-08,34;UBERON:0002020,7.67e-08,34;UBERON:0001893,7.67e-08,34;UBERON:0001871,2.37e-07,6;UBERON:0000955,4.22e-07,68;UBERON:0006238,4.22e-07,68;UBERON:0002771,4.56e-07,2|phase1_expression=0.181678379270557,0,0.281908808191942,1.0007329835313,1.34088328328186,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,1.47901604066715,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0.318565414324097,0,0,0,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0,0.573673241497627,0,0,0,0,0,0.404132016209064,0,0.151357427644931,0,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17447 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_ENST00000435891_5end | |||
|description=CAGE_peak_9_at_CLSTN1_5end | |||
|id=chr1:9811677..9811688,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;9.76e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.77e-15,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!4.41e-14!59;UBERON:0001049!1.37e-13!57;UBERON:0005068!1.37e-13!57;UBERON:0006241!1.37e-13!57;UBERON:0007135!1.37e-13!57;UBERON:0000955!9.51e-13!69;UBERON:0006238!9.51e-13!69;UBERON:0000956!5.83e-11!25;UBERON:0000203!5.83e-11!25;UBERON:0001017!6.85e-11!82;UBERON:0002619!8.96e-11!22;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0005743!2.37e-10!86;UBERON:0001893!3.92e-10!34;UBERON:0002791!5.19e-10!33;UBERON:0002780!7.37e-10!41;UBERON:0001890!7.37e-10!41;UBERON:0006240!7.37e-10!41;UBERON:0002346!1.34e-09!90;UBERON:0000153!1.43e-09!129;UBERON:0007811!1.43e-09!129;UBERON:0003075!1.63e-09!86;UBERON:0007284!1.63e-09!86;UBERON:0003080!2.13e-09!42;UBERON:0000033!2.35e-09!123;UBERON:0001869!2.66e-09!32;UBERON:0001950!2.97e-09!20;UBERON:0007023!8.15e-09!115;UBERON:0000073!1.91e-08!94;UBERON:0001016!1.91e-08!94;UBERON:0000477!1.20e-07!286;UBERON:0000064!1.21e-07!219;UBERON:0003056!9.33e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;4.35e-23;2!UBERON:0000200;2.00e-17;6!UBERON:0001870;9.76e-16;3!UBERON:0001950;3.23e-13;20!UBERON:0002619;4.63e-12;22!UBERON:0000956;1.17e-10;25!UBERON:0000203;1.17e-10;25!UBERON:0003688;2.51e-08;6!UBERON:0002358;2.51e-08;6!UBERON:0003684;2.51e-08;6!UBERON:0001178;2.51e-08;6!UBERON:0002791;2.64e-08;32!UBERON:0001869;2.64e-08;32!UBERON:0001871;2.22e-07;6!UBERON:0003528;3.71e-07;34!UBERON:0002020;3.71e-07;34!UBERON:0002771;4.55e-07;2!UBERON:0001893;5.30e-07;34!UBERON:0001905;7.60e-07;2!UBERON:0002757;7.60e-07;2!UBERON:0010134;7.60e-07;2!UBERON:0005408;7.60e-07;2!UBERON:0001899;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,3.49e-23,2;UBERON:0000200,1.80e-17,6;UBERON:0001870,8.44e-16,3;UBERON:0001950,3.89e-13,20;UBERON:0002619,5.47e-12,22;UBERON:0000956,1.35e-10,25;UBERON:0000203,1.35e-10,25;UBERON:0000073,2.10e-09,53;UBERON:0002616,2.10e-09,53;UBERON:0002780,4.27e-09,41;UBERON:0001890,4.27e-09,41;UBERON:0003080,4.27e-09,41;UBERON:0006240,4.27e-09,41;UBERON:0001049,7.12e-09,56;UBERON:0005068,7.12e-09,56;UBERON:0006241,7.12e-09,56;UBERON:0007135,7.12e-09,56;UBERON:0002791,2.52e-08,32;UBERON:0001869,2.52e-08,32;UBERON:0003688,3.37e-08,6;UBERON:0002358,3.37e-08,6;UBERON:0003684,3.37e-08,6;UBERON:0001178,3.37e-08,6;UBERON:0003528,7.67e-08,34;UBERON:0002020,7.67e-08,34;UBERON:0001893,7.67e-08,34;UBERON:0001871,2.37e-07,6;UBERON:0000955,4.22e-07,68;UBERON:0006238,4.22e-07,68;UBERON:0002771,4.56e-07,2 | |||
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| |||
|short_description=p9@CLSTN1 | |||
}} |
Revision as of 07:22, 12 September 2013
Short description: | p9@CLSTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_CLSTN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000435891_5end |
EntrezGene: | CLSTN1 |
HGNC: | 17447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.77e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 3.49e-23 | 2 |
gyrus | 1.80e-17 | 6 |
frontal cortex | 8.44e-16 | 3 |
neocortex | 3.89e-13 | 20 |
regional part of cerebral cortex | 5.47e-12 | 22 |
cerebral cortex | 1.35e-10 | 25 |
pallium | 1.35e-10 | 25 |
regional part of nervous system | 2.10e-09 | 53 |
regional part of brain | 2.10e-09 | 53 |
regional part of forebrain | 4.27e-09 | 41 |
forebrain | 4.27e-09 | 41 |
anterior neural tube | 4.27e-09 | 41 |
future forebrain | 4.27e-09 | 41 |
neural tube | 7.12e-09 | 56 |
neural rod | 7.12e-09 | 56 |
future spinal cord | 7.12e-09 | 56 |
neural keel | 7.12e-09 | 56 |
regional part of telencephalon | 2.52e-08 | 32 |
cerebral hemisphere | 2.52e-08 | 32 |
omentum | 3.37e-08 | 6 |
peritoneum | 3.37e-08 | 6 |
abdominal cavity | 3.37e-08 | 6 |
visceral peritoneum | 3.37e-08 | 6 |
brain grey matter | 7.67e-08 | 34 |
gray matter | 7.67e-08 | 34 |
telencephalon | 7.67e-08 | 34 |
temporal lobe | 2.37e-07 | 6 |
brain | 4.22e-07 | 68 |
future brain | 4.22e-07 | 68 |
middle temporal gyrus | 4.56e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.