FFCP PHASE1:Hg19::chr1:66797938..66797950,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5142|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8781|TSSclassifier=S|UniProt=E9PR34|association_with_transcript=66bp_to_ENST00000526197_5end|coexpression_cluster_id=C2|description=CAGE_peak_8_at_PDE4B_5end|id=chr1:66797938..66797950,+|ontology_enrichment_celltype=CL:0000738!1.15e-51!140;CL:0000037!6.76e-45!172;CL:0000566!6.76e-45!172;CL:0002087!8.77e-43!119;CL:0000988!2.49e-42!182;CL:0002032!3.96e-41!165;CL:0000837!3.96e-41!165;CL:0002031!2.48e-38!124;CL:0002057!1.95e-29!42;CL:0000766!1.27e-26!76;CL:0000860!5.36e-26!45;CL:0002009!2.59e-24!65;CL:0002194!4.52e-23!63;CL:0000576!4.52e-23!63;CL:0000040!4.52e-23!63;CL:0000559!4.52e-23!63;CL:0000763!5.26e-23!112;CL:0000049!5.26e-23!112;CL:0000557!2.37e-22!71;CL:0000839!4.28e-20!70;CL:0000542!9.81e-17!53;CL:0000051!9.81e-17!53;CL:0000838!2.60e-16!52;CL:0000236!1.61e-09!14;CL:0000945!1.84e-09!24;CL:0000826!1.84e-09!24;CL:0000791!9.13e-09!18;CL:0000789!9.13e-09!18;CL:0002420!9.13e-09!18;CL:0002419!9.13e-09!18;CL:0000790!9.13e-09!18;CL:0000094!3.26e-08!8;CL:0000134!4.34e-07!358;CL:0002393!4.86e-07!9;CL:0002397!4.86e-07!9;CL:0000084!6.82e-07!25;CL:0000827!6.82e-07!25|ontology_enrichment_celltype_v019=CL:0000860;2.23e-37;33!CL:0002057;2.23e-37;33!CL:0000576;1.37e-29;48!CL:0000473;3.72e-25;39!CL:0000234;3.72e-25;39!CL:0002087;6.35e-20;104!CL:0000766;2.03e-19;69!CL:0000738;2.19e-16;136!CL:0000791;2.23e-15;18!CL:0000789;2.23e-15;18!CL:0002419;2.23e-15;18!CL:0000094;2.01e-13;8!CL:0000236;5.30e-13;13!CL:0000084;1.99e-12;25!CL:0000542;2.40e-12;53!CL:0000988;2.54e-11;177!CL:0000081;5.25e-11;11!CL:0000625;3.61e-10;11!CL:0002393;2.87e-09;6!CL:0002397;2.87e-09;6!CL:0000763;3.55e-09;100!CL:0000451;2.93e-08;10!CL:0000624;4.23e-08;6!CL:0000453;7.56e-08;5!CL:0000219;8.74e-08;193|ontology_enrichment_celltype_v019_2=CL:0000738,6.11e-78,136;CL:0000037,5.78e-63,168;CL:0000988,7.49e-61,177;CL:0002087,2.36e-60,115;CL:0002032,2.36e-56,161;CL:0000837,2.36e-56,161;CL:0002031,1.72e-54,120;CL:0000860,2.67e-49,42;CL:0002057,2.67e-49,42;CL:0000766,2.18e-43,72;CL:0000473,2.88e-41,48;CL:0000234,2.88e-41,48;CL:0002009,1.72e-37,61;CL:0000557,8.17e-36,67;CL:0002194,2.59e-35,59;CL:0000576,2.59e-35,59;CL:0000040,2.59e-35,59;CL:0000559,2.59e-35,59;CL:0000763,2.71e-33,108;CL:0000049,2.71e-33,108;CL:0000839,2.06e-31,66;CL:0000542,3.06e-20,53;CL:0000051,3.06e-20,53;CL:0000838,1.52e-19,52;CL:0000791,2.22e-15,18;CL:0000789,2.22e-15,18;CL:0002420,2.22e-15,18;CL:0002419,2.22e-15,18;CL:0000790,2.22e-15,18;CL:0000134,2.19e-14,354;CL:0002320,1.37e-13,361;CL:0000094,2.03e-13,8;CL:0000084,2.31e-12,25;CL:0000827,2.31e-12,25;CL:0000219,3.45e-12,386;CL:0000236,8.21e-12,14;CL:0000081,5.55e-11,11;CL:0000625,3.79e-10,11;CL:0002393,2.00e-09,9;CL:0002397,2.00e-09,9;CL:0000451,2.90e-08,10;CL:0000624,3.99e-08,6;CL:0000453,7.41e-08,5;CL:0000034,7.80e-08,441;CL:0000048,1.27e-07,427;CL:0000723,3.39e-07,433|ontology_enrichment_development_v019=CL:0002057;3.76e-35;42!CL:0000790;2.23e-15;18!CL:0000051;2.40e-12;53!CL:0000049;7.22e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.21e-28!112;UBERON:0002390!6.10e-28!102;UBERON:0003061!6.10e-28!102;UBERON:0002371!4.34e-18!80;UBERON:0001474!1.46e-16!86;UBERON:0002405!2.27e-15!115;UBERON:0004765!4.71e-14!101;UBERON:0001434!4.71e-14!101;UBERON:0007023!2.00e-12!115;UBERON:0000178!3.20e-10!15;UBERON:0000179!3.20e-10!15;UBERON:0000463!3.20e-10!15;UBERON:0003081!1.12e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;6.89e-15;15!UBERON:0000179;6.89e-15;15!UBERON:0000463;6.89e-15;15!UBERON:0002390;1.33e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.60e-44,98;UBERON:0003061,1.60e-44,98;UBERON:0002193,2.45e-41,108;UBERON:0002371,3.36e-31,76;UBERON:0002405,8.97e-29,93;UBERON:0001474,9.25e-28,82;UBERON:0004765,6.56e-24,90;UBERON:0001434,5.33e-20,100;UBERON:0000178,5.03e-15,15;UBERON:0000179,5.03e-15,15;UBERON:0000463,5.03e-15,15;UBERON:0003081,1.61e-12,203;UBERON:0002384,1.64e-12,371;UBERON:0002204,4.17e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.382067028739756,0.821005894499457,0.787107813136792,20.8483066729919,12.2825407391108,17.0297735647684,0,0,0,0.852139206383318,1.84820002233648,4.40400659002271,27.145775018062,23.2631559065364,18.2289131401316,1.56740831967947,0.647787332037959,2.06060454107349,1.89017710413434,2.26725566213286,3.15359279544161,8.83230340241602,9.45686142450199,8.981484755958,6.04154023876516,8.45330331546032,13.7159693335379,14.479318590938,15.4916324060118,12.1883837934908,6.02375486536335,10.0975275521403,14.8317499733756,11.6311879100943,17.009238435033,14.7047538933779,7.25672860410775,3.59034583718937,11.9342930149154,11.6083695451434,19.2910976394988,16.8162007228805,3.51748131359441,9.38669253156363,8.68755378820467,6.65939452896706,13.6262725315399,17.4054313092486,6.76016916198214,8.71677629856678,6.28975936525128,8.761633229426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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |||
|TSSclassifier=S | |||
|UniProt=E9PR34 | |||
|association_with_transcript=66bp_to_ENST00000526197_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_PDE4B_5end | |||
|id=chr1:66797938..66797950,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.15e-51!140;CL:0000037!6.76e-45!172;CL:0000566!6.76e-45!172;CL:0002087!8.77e-43!119;CL:0000988!2.49e-42!182;CL:0002032!3.96e-41!165;CL:0000837!3.96e-41!165;CL:0002031!2.48e-38!124;CL:0002057!1.95e-29!42;CL:0000766!1.27e-26!76;CL:0000860!5.36e-26!45;CL:0002009!2.59e-24!65;CL:0002194!4.52e-23!63;CL:0000576!4.52e-23!63;CL:0000040!4.52e-23!63;CL:0000559!4.52e-23!63;CL:0000763!5.26e-23!112;CL:0000049!5.26e-23!112;CL:0000557!2.37e-22!71;CL:0000839!4.28e-20!70;CL:0000542!9.81e-17!53;CL:0000051!9.81e-17!53;CL:0000838!2.60e-16!52;CL:0000236!1.61e-09!14;CL:0000945!1.84e-09!24;CL:0000826!1.84e-09!24;CL:0000791!9.13e-09!18;CL:0000789!9.13e-09!18;CL:0002420!9.13e-09!18;CL:0002419!9.13e-09!18;CL:0000790!9.13e-09!18;CL:0000094!3.26e-08!8;CL:0000134!4.34e-07!358;CL:0002393!4.86e-07!9;CL:0002397!4.86e-07!9;CL:0000084!6.82e-07!25;CL:0000827!6.82e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-37;33!CL:0002057;2.23e-37;33!CL:0000576;1.37e-29;48!CL:0000473;3.72e-25;39!CL:0000234;3.72e-25;39!CL:0002087;6.35e-20;104!CL:0000766;2.03e-19;69!CL:0000738;2.19e-16;136!CL:0000791;2.23e-15;18!CL:0000789;2.23e-15;18!CL:0002419;2.23e-15;18!CL:0000094;2.01e-13;8!CL:0000236;5.30e-13;13!CL:0000084;1.99e-12;25!CL:0000542;2.40e-12;53!CL:0000988;2.54e-11;177!CL:0000081;5.25e-11;11!CL:0000625;3.61e-10;11!CL:0002393;2.87e-09;6!CL:0002397;2.87e-09;6!CL:0000763;3.55e-09;100!CL:0000451;2.93e-08;10!CL:0000624;4.23e-08;6!CL:0000453;7.56e-08;5!CL:0000219;8.74e-08;193 | |||
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|ontology_enrichment_development_v019=CL:0002057;3.76e-35;42!CL:0000790;2.23e-15;18!CL:0000051;2.40e-12;53!CL:0000049;7.22e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.21e-28!112;UBERON:0002390!6.10e-28!102;UBERON:0003061!6.10e-28!102;UBERON:0002371!4.34e-18!80;UBERON:0001474!1.46e-16!86;UBERON:0002405!2.27e-15!115;UBERON:0004765!4.71e-14!101;UBERON:0001434!4.71e-14!101;UBERON:0007023!2.00e-12!115;UBERON:0000178!3.20e-10!15;UBERON:0000179!3.20e-10!15;UBERON:0000463!3.20e-10!15;UBERON:0003081!1.12e-07!216 | |||
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| |||
|short_description=p8@PDE4B | |||
}} |
Revision as of 06:32, 12 September 2013
Short description: | p8@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PDE4B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 66bp_to_ENST00000526197_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | E9PR34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.60e-44 | 98 |
blood island | 1.60e-44 | 98 |
hemolymphoid system | 2.45e-41 | 108 |
bone marrow | 3.36e-31 | 76 |
immune system | 8.97e-29 | 93 |
bone element | 9.25e-28 | 82 |
skeletal element | 6.56e-24 | 90 |
skeletal system | 5.33e-20 | 100 |
blood | 5.03e-15 | 15 |
haemolymphatic fluid | 5.03e-15 | 15 |
organism substance | 5.03e-15 | 15 |
lateral plate mesoderm | 1.61e-12 | 203 |
connective tissue | 1.64e-12 | 371 |
musculoskeletal system | 4.17e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.