FFCP PHASE1:Hg19::chr1:56982672..56982686,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8613|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9229|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000472957_5end|description=CAGE_peak_8_at_PPAP2B_5end|id=chr1:56982672..56982686,-|ontology_enrichment_celltype=CL:0000766!2.51e-33!76;CL:0002194!1.54e-32!63;CL:0000576!1.54e-32!63;CL:0000040!1.54e-32!63;CL:0000559!1.54e-32!63;CL:0002009!7.50e-31!65;CL:0002057!4.41e-30!42;CL:0000839!4.46e-27!70;CL:0000860!6.72e-27!45;CL:0000557!2.17e-26!71;CL:0000763!2.12e-17!112;CL:0000049!2.12e-17!112;CL:0002087!3.01e-17!119;CL:0000738!1.15e-16!140;CL:0002031!6.08e-13!124;CL:0000037!1.03e-10!172;CL:0000566!1.03e-10!172;CL:0002032!1.73e-10!165;CL:0000837!1.73e-10!165;CL:0000988!1.06e-09!182|ontology_enrichment_celltype_v019=CL:0000860;7.71e-51;33!CL:0002057;7.71e-51;33!CL:0000473;6.32e-50;39!CL:0000234;6.32e-50;39!CL:0000576;9.86e-34;48!CL:0000766;1.71e-28;69!CL:0000763;4.46e-13;100!CL:0000094;2.05e-12;8!CL:0000235;2.14e-12;6!CL:0002087;8.81e-09;104!CL:0000081;1.02e-08;11!CL:0000738;1.56e-08;136!CL:0000767;1.76e-07;3!CL:0002619;7.64e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,1.84e-66,72;CL:0000473,1.72e-61,48;CL:0000234,1.72e-61,48;CL:0002194,8.15e-61,59;CL:0000576,8.15e-61,59;CL:0000040,8.15e-61,59;CL:0000559,8.15e-61,59;CL:0002009,2.02e-58,61;CL:0000839,4.60e-53,66;CL:0000557,4.35e-52,67;CL:0000860,1.07e-50,42;CL:0002057,1.07e-50,42;CL:0000763,1.76e-41,108;CL:0000049,1.76e-41,108;CL:0000738,9.96e-33,136;CL:0002087,2.00e-29,115;CL:0002031,3.08e-26,120;CL:0002032,2.09e-25,161;CL:0000837,2.09e-25,161;CL:0000037,6.50e-25,168;CL:0000988,6.77e-23,177;CL:0000094,1.62e-12,8;CL:0000235,3.19e-12,6;CL:0000081,8.63e-09,11;CL:0000767,1.58e-07,3;CL:0002619,8.07e-07,3|ontology_enrichment_development_v019=CL:0002057;1.30e-37;42!CL:0000049;6.79e-12;108|ontology_enrichment_disease=DOID:1749!5.01e-09!14|ontology_enrichment_disease_v019=DOID:1749;5.10e-07;14|ontology_enrichment_disease_v019_2=DOID:1749,4.23e-07,14|ontology_enrichment_uberon=UBERON:0002371!3.55e-22!80;UBERON:0002390!5.43e-20!102;UBERON:0003061!5.43e-20!102;UBERON:0001474!3.56e-19!86;UBERON:0002193!1.66e-17!112;UBERON:0004765!8.06e-15!101;UBERON:0001434!8.06e-15!101;UBERON:0002405!4.27e-12!115;UBERON:0003081!9.07e-09!216;UBERON:0000062!4.33e-07!511|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-46,76;UBERON:0001474,3.00e-42,82;UBERON:0004765,2.30e-37,90;UBERON:0002390,1.04e-36,98;UBERON:0003061,1.04e-36,98;UBERON:0002405,9.48e-36,93;UBERON:0001434,2.33e-32,100;UBERON:0002193,4.32e-32,108;UBERON:0002204,1.82e-14,167;UBERON:0003081,5.06e-12,203|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0.492603536699674,0.157421562627358,6.29382842958246,2.68680578668049,3.56077083626975,0,0.90361775633475,0.369754010166788,0.619737604642413,0,0,11.0799081706375,4.01088894940283,5.4252717678963,1.79132379391939,2.26725566213286,2.06060454107349,2.32637182047304,2.26725566213286,1.21292030593908,6.0431549595478,8.22335776043652,7.43295290148249,6.04154023876516,8.96562472851852,8.0403958162119,16.5477926753577,12.9096936716765,20.3139729891513,4.89430082810772,4.63940455098338,7.19115150224271,8.57034898638527,9.62787081228281,6.39337125799041,0.659702600373432,5.38551875578406,1.70489900213078,11.6083695451434,9.64554881974938,7.4738669879469,9.54744927975624,15.1230046341858,13.6828972164223,8.47559303686716,13.6262725315399,9.81033401066742,0.211255286311942,0,0.419317291016752,0.22465726229299,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,1.9472843619281,2.96020553408754,0.930705723632056,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.109750285408626,0,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,1.47730203652438,4.68008530278475,2.0808362720422,0,0.671928512795438,0,0.447792613514241,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,2.43247561282381,1.00451418286425,4.21667878966063,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.426910231213777,0.303127571446259,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9229 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000472957_5end | |||
|description=CAGE_peak_8_at_PPAP2B_5end | |||
|id=chr1:56982672..56982686,- | |||
|ontology_enrichment_celltype=CL:0000766!2.51e-33!76;CL:0002194!1.54e-32!63;CL:0000576!1.54e-32!63;CL:0000040!1.54e-32!63;CL:0000559!1.54e-32!63;CL:0002009!7.50e-31!65;CL:0002057!4.41e-30!42;CL:0000839!4.46e-27!70;CL:0000860!6.72e-27!45;CL:0000557!2.17e-26!71;CL:0000763!2.12e-17!112;CL:0000049!2.12e-17!112;CL:0002087!3.01e-17!119;CL:0000738!1.15e-16!140;CL:0002031!6.08e-13!124;CL:0000037!1.03e-10!172;CL:0000566!1.03e-10!172;CL:0002032!1.73e-10!165;CL:0000837!1.73e-10!165;CL:0000988!1.06e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.71e-51;33!CL:0002057;7.71e-51;33!CL:0000473;6.32e-50;39!CL:0000234;6.32e-50;39!CL:0000576;9.86e-34;48!CL:0000766;1.71e-28;69!CL:0000763;4.46e-13;100!CL:0000094;2.05e-12;8!CL:0000235;2.14e-12;6!CL:0002087;8.81e-09;104!CL:0000081;1.02e-08;11!CL:0000738;1.56e-08;136!CL:0000767;1.76e-07;3!CL:0002619;7.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.84e-66,72;CL:0000473,1.72e-61,48;CL:0000234,1.72e-61,48;CL:0002194,8.15e-61,59;CL:0000576,8.15e-61,59;CL:0000040,8.15e-61,59;CL:0000559,8.15e-61,59;CL:0002009,2.02e-58,61;CL:0000839,4.60e-53,66;CL:0000557,4.35e-52,67;CL:0000860,1.07e-50,42;CL:0002057,1.07e-50,42;CL:0000763,1.76e-41,108;CL:0000049,1.76e-41,108;CL:0000738,9.96e-33,136;CL:0002087,2.00e-29,115;CL:0002031,3.08e-26,120;CL:0002032,2.09e-25,161;CL:0000837,2.09e-25,161;CL:0000037,6.50e-25,168;CL:0000988,6.77e-23,177;CL:0000094,1.62e-12,8;CL:0000235,3.19e-12,6;CL:0000081,8.63e-09,11;CL:0000767,1.58e-07,3;CL:0002619,8.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-37;42!CL:0000049;6.79e-12;108 | |||
|ontology_enrichment_disease=DOID:1749!5.01e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.10e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.23e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.55e-22!80;UBERON:0002390!5.43e-20!102;UBERON:0003061!5.43e-20!102;UBERON:0001474!3.56e-19!86;UBERON:0002193!1.66e-17!112;UBERON:0004765!8.06e-15!101;UBERON:0001434!8.06e-15!101;UBERON:0002405!4.27e-12!115;UBERON:0003081!9.07e-09!216;UBERON:0000062!4.33e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-46,76;UBERON:0001474,3.00e-42,82;UBERON:0004765,2.30e-37,90;UBERON:0002390,1.04e-36,98;UBERON:0003061,1.04e-36,98;UBERON:0002405,9.48e-36,93;UBERON:0001434,2.33e-32,100;UBERON:0002193,4.32e-32,108;UBERON:0002204,1.82e-14,167;UBERON:0003081,5.06e-12,203 | |||
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| |||
|short_description=p8@PPAP2B | |||
}} |
Revision as of 06:13, 12 September 2013
Short description: | p8@PPAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PPAP2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472957_5end |
EntrezGene: | PPAP2B |
HGNC: | 9229 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.84e-66 | 72 |
defensive cell | 1.72e-61 | 48 |
phagocyte | 1.72e-61 | 48 |
monopoietic cell | 8.15e-61 | 59 |
monocyte | 8.15e-61 | 59 |
monoblast | 8.15e-61 | 59 |
promonocyte | 8.15e-61 | 59 |
macrophage dendritic cell progenitor | 2.02e-58 | 61 |
myeloid lineage restricted progenitor cell | 4.60e-53 | 66 |
granulocyte monocyte progenitor cell | 4.35e-52 | 67 |
classical monocyte | 1.07e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-50 | 42 |
myeloid cell | 1.76e-41 | 108 |
common myeloid progenitor | 1.76e-41 | 108 |
leukocyte | 9.96e-33 | 136 |
nongranular leukocyte | 2.00e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 3.08e-26 | 120 |
hematopoietic oligopotent progenitor cell | 2.09e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-25 | 161 |
hematopoietic stem cell | 6.50e-25 | 168 |
hematopoietic cell | 6.77e-23 | 177 |
granulocyte | 1.62e-12 | 8 |
macrophage | 3.19e-12 | 6 |
blood cell | 8.63e-09 | 11 |
basophil | 1.58e-07 | 3 |
adult endothelial progenitor cell | 8.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-46 | 76 |
bone element | 3.00e-42 | 82 |
skeletal element | 2.30e-37 | 90 |
hematopoietic system | 1.04e-36 | 98 |
blood island | 1.04e-36 | 98 |
immune system | 9.48e-36 | 93 |
skeletal system | 2.33e-32 | 100 |
hemolymphoid system | 4.32e-32 | 108 |
musculoskeletal system | 1.82e-14 | 167 |
lateral plate mesoderm | 5.06e-12 | 203 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.23e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.