FFCP PHASE1:Hg19::chr1:44444639..44444661,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8704|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=925|TSSclassifier=S|UniProt=|association_with_transcript=24bp_to_ENST00000498543_5end|description=CAGE_peak_4_at_B4GALT2_5end|id=chr1:44444639..44444661,+|ontology_enrichment_celltype=CL:0000055!2.13e-29!180;CL:0000057!1.85e-22!75;CL:0000548!3.86e-16!679;CL:0000004!3.86e-16!679;CL:0000255!3.86e-16!679;CL:0000012!1.54e-15!682;CL:0000144!2.78e-14!625;CL:0002321!8.85e-13!248;CL:0000220!1.48e-12!246;CL:0002371!1.03e-11!591;CL:0000222!3.94e-11!119;CL:0002620!2.74e-10!23;CL:0000003!2.02e-08!722;CL:0000183!1.21e-07!59;CL:0000680!1.46e-07!57;CL:0000056!1.46e-07!57;CL:0000355!1.46e-07!57;CL:0000187!9.31e-07!54;CL:0000393!9.88e-07!60;CL:0000211!9.88e-07!60|ontology_enrichment_celltype_v019=CL:0002620;3.14e-12;23!CL:0002570;1.21e-09;8!CL:0000057;7.13e-07;73!CL:0000135;9.36e-07;3!CL:0000708;9.36e-07;3!CL:0002582;9.36e-07;3!CL:0000388;9.36e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,4.82e-23,76;CL:0002620,5.55e-13,23;CL:0002570,1.74e-09,8;CL:0000048,3.29e-08,427;CL:0000723,7.29e-08,433;CL:0000034,2.02e-07,441;CL:0002320,3.44e-07,361;CL:0002582,3.69e-07,3;CL:0000134,4.02e-07,354;CL:0000135,4.02e-07,3;CL:0000388,4.02e-07,3;CL:0000219,5.40e-07,386|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!1.57e-10!143;UBERON:0002100!3.13e-09!216;UBERON:0000914!1.08e-08!83;UBERON:0002329!1.08e-08!83;UBERON:0003077!1.08e-08!83;UBERON:0003059!1.08e-08!83;UBERON:0007282!1.08e-08!83;UBERON:0009618!1.08e-08!83;UBERON:0007285!1.08e-08!83;UBERON:0003104!8.35e-08!238;UBERON:0009142!8.35e-08!238;UBERON:0000475!9.07e-08!365;UBERON:0004290!1.66e-07!70;UBERON:0000486!2.01e-07!82;UBERON:0000490!3.60e-07!138;UBERON:0003102!7.22e-07!95|ontology_enrichment_uberon_v019=UBERON:0001013;9.24e-09;14!UBERON:0002072;4.26e-07;5!UBERON:0007846;9.36e-07;3!UBERON:0000043;9.36e-07;3!UBERON:0007845;9.36e-07;3!UBERON:0003210;9.36e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.27e-09,46;UBERON:0002416,3.27e-09,46;UBERON:0001013,1.85e-08,14;UBERON:0007846,4.02e-07,3;UBERON:0000043,4.02e-07,3;UBERON:0007845,4.02e-07,3;UBERON:0002072,4.15e-07,5;UBERON:0003102,9.48e-07,99|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0,0,1.26343974685366,1.04474251279935,0.737201809504527,0,0.436882744260345,0.263766978228454,0.247532705920093,0.662794751455832,0,0.602694528023977,0.730310090387373,0.975865597581014,1.10808952269109,1.02000345622126,0,0.286235987131057,0.684372125364421,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.767175371061182,0.361439152384566,0,1.15877215168659,0,0.486634870302636,0.189069634328136,0.665188192387692,0.43917392846563,0,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.550236083880135,0.626984899610432,0,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.535798369704479,0.673588117878509,0.675668882899933,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0,0.573673241497627,0.709336764396714,0.560677600142307,0,0.74000264525148,0.311211035399766,0.67355336034844,1.47115712802113,0.302714855289863,1.15235184896,1.17160715916898,0.624320153660641,0.570471821544449,0.896692083310806,1.40921398372518,0.647491777472526,0.561803226808994,0.61246251376468,0.982674538494144,0.516628905878827,1.18800285728205,1.48360157567134,2.73048408581408,0,0.505008341862199,1.37630371859161,0.277064115484183,1.31693286264251,1.5324389789951,0.901428353439581,1.02088964844019,1.79389635688862,0.213557388818567,1.90738711043606,2.10063767259082,0.824420233907511,1.54584324027377,1.11670113798954,1.85653965465393,1.85130309806277,0.757301322732344,1.38074847963449,1.45481451136931,1.77504796258307,1.0075209822764,1.3564847384839,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.621966330092223,0.756962552626885,1.45990943630332,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.473227200159376,0.337169380156203,0.241011029883482,0.441175890929576,1.08939722046203,0.949082476444386,0.269662616320329,0.784885860501384,0,1.4763109092493,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0.686271241194102,0,0,0,0.0925884451585296,1.3032332212413,2.07986957055916,1.44331342025273,0,0.352226082707465,0.433099343283221,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,0.492663237895943,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,1.00917975910825,1.30788020649984,1.02673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0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0.22910686854405,0.93061915699296,0,0,0.196300467230486,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0,0.219881033490858,0,0.154348316215889,0,0,0,0,0,0,0,1.69927114687817,0,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,1.85997509083376,1.38652688589425,1.29787968637137,0.630832124175395,0.655593431782173,1.52038201213724,0.509944148709909,0.801652215796681,0.0918948995348449,0.250707539292375,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0.33639558774184,0,0.808468755832877,0,0,0,0.143444410785353,0,0.0814032686109745,0.426909383510862,0,0.269475606319761,0,0,0,0,0.201273793591026,0|short_description=p4@B4GALT2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=925 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENST00000498543_5end | |||
|description=CAGE_peak_4_at_B4GALT2_5end | |||
|id=chr1:44444639..44444661,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.13e-29!180;CL:0000057!1.85e-22!75;CL:0000548!3.86e-16!679;CL:0000004!3.86e-16!679;CL:0000255!3.86e-16!679;CL:0000012!1.54e-15!682;CL:0000144!2.78e-14!625;CL:0002321!8.85e-13!248;CL:0000220!1.48e-12!246;CL:0002371!1.03e-11!591;CL:0000222!3.94e-11!119;CL:0002620!2.74e-10!23;CL:0000003!2.02e-08!722;CL:0000183!1.21e-07!59;CL:0000680!1.46e-07!57;CL:0000056!1.46e-07!57;CL:0000355!1.46e-07!57;CL:0000187!9.31e-07!54;CL:0000393!9.88e-07!60;CL:0000211!9.88e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.14e-12;23!CL:0002570;1.21e-09;8!CL:0000057;7.13e-07;73!CL:0000135;9.36e-07;3!CL:0000708;9.36e-07;3!CL:0002582;9.36e-07;3!CL:0000388;9.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.82e-23,76;CL:0002620,5.55e-13,23;CL:0002570,1.74e-09,8;CL:0000048,3.29e-08,427;CL:0000723,7.29e-08,433;CL:0000034,2.02e-07,441;CL:0002320,3.44e-07,361;CL:0002582,3.69e-07,3;CL:0000134,4.02e-07,354;CL:0000135,4.02e-07,3;CL:0000388,4.02e-07,3;CL:0000219,5.40e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.57e-10!143;UBERON:0002100!3.13e-09!216;UBERON:0000914!1.08e-08!83;UBERON:0002329!1.08e-08!83;UBERON:0003077!1.08e-08!83;UBERON:0003059!1.08e-08!83;UBERON:0007282!1.08e-08!83;UBERON:0009618!1.08e-08!83;UBERON:0007285!1.08e-08!83;UBERON:0003104!8.35e-08!238;UBERON:0009142!8.35e-08!238;UBERON:0000475!9.07e-08!365;UBERON:0004290!1.66e-07!70;UBERON:0000486!2.01e-07!82;UBERON:0000490!3.60e-07!138;UBERON:0003102!7.22e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.24e-09;14!UBERON:0002072;4.26e-07;5!UBERON:0007846;9.36e-07;3!UBERON:0000043;9.36e-07;3!UBERON:0007845;9.36e-07;3!UBERON:0003210;9.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.27e-09,46;UBERON:0002416,3.27e-09,46;UBERON:0001013,1.85e-08,14;UBERON:0007846,4.02e-07,3;UBERON:0000043,4.02e-07,3;UBERON:0007845,4.02e-07,3;UBERON:0002072,4.15e-07,5;UBERON:0003102,9.48e-07,99 | |||
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| |||
|short_description=p4@B4GALT2 | |||
}} |
Revision as of 05:51, 12 September 2013
Short description: | p4@B4GALT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_B4GALT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000498543_5end |
EntrezGene: | B4GALT2 |
HGNC: | 925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.82e-23 | 76 |
skin fibroblast | 5.55e-13 | 23 |
mesenchymal stem cell of adipose | 1.74e-09 | 8 |
multi fate stem cell | 3.29e-08 | 427 |
somatic stem cell | 7.29e-08 | 433 |
stem cell | 2.02e-07 | 441 |
connective tissue cell | 3.44e-07 | 361 |
visceral preadipocyte | 3.69e-07 | 3 |
mesenchymal cell | 4.02e-07 | 354 |
fibrocyte | 4.02e-07 | 3 |
tendon cell | 4.02e-07 | 3 |
motile cell | 5.40e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
integument | 3.27e-09 | 46 |
integumental system | 3.27e-09 | 46 |
adipose tissue | 1.85e-08 | 14 |
dense regular connective tissue | 4.02e-07 | 3 |
tendon | 4.02e-07 | 3 |
regular connective tissue | 4.02e-07 | 3 |
hypodermis | 4.15e-07 | 5 |
surface structure | 9.48e-07 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.