FFCP PHASE1:Hg19::chr1:40840182..40840198,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1852|description=CAGE_peak_at_chr1:40840182..40840198,-|id=chr1:40840182..40840198,-|ontology_enrichment_celltype=CL:0000738!1.43e-60!140;CL:0002087!1.17e-52!119;CL:0002031!1.82e-50!124;CL:0000037!2.43e-48!172;CL:0000566!2.43e-48!172;CL:0002032!4.60e-47!165;CL:0000837!4.60e-47!165;CL:0000988!2.97e-46!182;CL:0000838!4.53e-36!52;CL:0000542!4.38e-35!53;CL:0000051!4.38e-35!53;CL:0002057!3.71e-22!42;CL:0000766!4.88e-20!76;CL:0000860!6.03e-20!45;CL:0000084!1.62e-19!25;CL:0000827!1.62e-19!25;CL:0000791!1.90e-18!18;CL:0000789!1.90e-18!18;CL:0002420!1.90e-18!18;CL:0002419!1.90e-18!18;CL:0000790!1.90e-18!18;CL:0002009!2.32e-17!65;CL:0000557!5.26e-17!71;CL:0000763!3.99e-16!112;CL:0000049!3.99e-16!112;CL:0002194!9.67e-16!63;CL:0000576!9.67e-16!63;CL:0000040!9.67e-16!63;CL:0000559!9.67e-16!63;CL:0000839!4.71e-15!70;CL:0000134!5.82e-15!358;CL:0000945!2.39e-14!24;CL:0000826!2.39e-14!24;CL:0002320!4.40e-14!365;CL:0000236!6.44e-14!14;CL:0000219!6.77e-12!390;CL:0000625!2.03e-10!11;CL:0002393!4.53e-10!9;CL:0002397!4.53e-10!9;CL:0000624!4.78e-09!6;CL:0000048!8.14e-09!430;CL:0000723!2.60e-08!436;CL:0000034!4.57e-08!444;CL:0000990!7.43e-07!8|ontology_enrichment_celltype_v019=CL:0000791;8.61e-20;18!CL:0000789;8.61e-20;18!CL:0002419;8.61e-20;18!CL:0000542;8.13e-18;53!CL:0000624;1.03e-16;6!CL:0000236;1.78e-14;13!CL:0000084;1.10e-13;25!CL:0000775;3.80e-13;3!CL:0000226;1.88e-12;3!CL:0000842;1.88e-12;3!CL:0000094;2.45e-12;8!CL:0000623;9.03e-12;3!CL:0000945;2.05e-09;24!CL:0002087;2.20e-09;104!CL:0000081;7.04e-09;11!CL:0000738;9.87e-09;136!CL:0000625;1.98e-08;11|ontology_enrichment_celltype_v019_2=CL:0000738,2.24e-38,136;CL:0002087,2.13e-30,115;CL:0000037,2.49e-29,168;CL:0000838,5.90e-28,52;CL:0000988,2.26e-27,177;CL:0000542,2.51e-27,53;CL:0000051,2.51e-27,53;CL:0002031,1.25e-26,120;CL:0002032,1.19e-25,161;CL:0000837,1.19e-25,161;CL:0000791,9.20e-20,18;CL:0000789,9.20e-20,18;CL:0002420,9.20e-20,18;CL:0002419,9.20e-20,18;CL:0000790,9.20e-20,18;CL:0000624,8.79e-17,6;CL:0000084,1.15e-13,25;CL:0000827,1.15e-13,25;CL:0000236,1.93e-13,14;CL:0000775,2.71e-13,3;CL:0000226,1.43e-12,3;CL:0000842,1.43e-12,3;CL:0000094,2.16e-12,8;CL:0000623,1.05e-11,3;CL:0000825,1.05e-11,3;CL:0000766,1.35e-09,72;CL:0000945,1.77e-09,24;CL:0000826,1.77e-09,24;CL:0000134,4.31e-09,354;CL:0000081,6.43e-09,11;CL:0002320,9.70e-09,361;CL:0000625,2.26e-08,11;CL:0000219,1.66e-07,386;CL:0000860,5.12e-07,42;CL:0002057,5.12e-07,42|ontology_enrichment_development_v019=CL:0000790;8.61e-20;18!CL:0000051;8.13e-18;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.73e-23!102;UBERON:0003061!2.73e-23!102;UBERON:0002193!1.20e-20!112;UBERON:0002384!6.99e-14!375;UBERON:0002371!1.05e-13!80;UBERON:0001474!1.80e-13!86;UBERON:0002405!2.24e-11!115;UBERON:0004765!6.07e-11!101;UBERON:0001434!6.07e-11!101;UBERON:0000178!1.93e-08!15;UBERON:0000179!1.93e-08!15;UBERON:0000463!1.93e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-08;15!UBERON:0000179;1.71e-08;15!UBERON:0000463;1.71e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.04e-09,98;UBERON:0003061,4.04e-09,98;UBERON:0000178,1.69e-08,15;UBERON:0000179,1.69e-08,15;UBERON:0000463,1.69e-08,15;UBERON:0002384,2.92e-08,371;UBERON:0002193,6.68e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0,1.18009283054671,0,0.309632246632152,0,0,0,0.309868802321207,0,0,0.553995408531877,1.00272223735071,0.651032612147555,0,0.32389366601898,0,0.290796477559129,0.377875943688809,0,0.464858073811369,0,0.309706370895104,2.01384674625505,2.0492856522328,1.89185783910868,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0.962787081228281,0.639337125799041,0.989553900560148,2.59302754908121,1.27867425159808,0.580418477257168,0,0,0.502497330513487,4.17186334736161,2.17188844705117,0,0,0.316462387440884,0.211255286311942,1.70083439972035,0.628975936525128,1.01095768031846,0.750884464207532,0.803627933485401,0.570025487482497,0.39783335439818,0.91332076882317,3.51992488922645,4.36910889009705,0.889509253863555,0.853460445133014,4.80475184443215,4.02326707968138,3.96626923670917,3.81621501814146,1.70763890732835,0.587237189370939,0,0,0.560508562981536,0,2.75393678159366,3.93010762749165,3.49522548299166,0,2.28145586643513,5.6813736688168,1.94826728407911,0,0.883817722424512,0.664601683750863,0.812411591295047,0.384273959177026,0.650296737799391,0.657751618414705,0.276350017785848,1.44901542867526,2.52087157375503,2.67540828089713,3.1360657141493,0.453237370790265,3.83220493601921,2.74901956386104,2.27717722817553,0.95569624297229,1.30216690771284,0,0.301150238155546,0.383959833463255,2.49861453104692,0.236777252044017,0.821127996921047,2.01606743224732,1.60464117470104,2.172366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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1852 | |||
|description=CAGE_peak_at_chr1:40840182..40840198,- | |||
|id=chr1:40840182..40840198,- | |||
|ontology_enrichment_celltype=CL:0000738!1.43e-60!140;CL:0002087!1.17e-52!119;CL:0002031!1.82e-50!124;CL:0000037!2.43e-48!172;CL:0000566!2.43e-48!172;CL:0002032!4.60e-47!165;CL:0000837!4.60e-47!165;CL:0000988!2.97e-46!182;CL:0000838!4.53e-36!52;CL:0000542!4.38e-35!53;CL:0000051!4.38e-35!53;CL:0002057!3.71e-22!42;CL:0000766!4.88e-20!76;CL:0000860!6.03e-20!45;CL:0000084!1.62e-19!25;CL:0000827!1.62e-19!25;CL:0000791!1.90e-18!18;CL:0000789!1.90e-18!18;CL:0002420!1.90e-18!18;CL:0002419!1.90e-18!18;CL:0000790!1.90e-18!18;CL:0002009!2.32e-17!65;CL:0000557!5.26e-17!71;CL:0000763!3.99e-16!112;CL:0000049!3.99e-16!112;CL:0002194!9.67e-16!63;CL:0000576!9.67e-16!63;CL:0000040!9.67e-16!63;CL:0000559!9.67e-16!63;CL:0000839!4.71e-15!70;CL:0000134!5.82e-15!358;CL:0000945!2.39e-14!24;CL:0000826!2.39e-14!24;CL:0002320!4.40e-14!365;CL:0000236!6.44e-14!14;CL:0000219!6.77e-12!390;CL:0000625!2.03e-10!11;CL:0002393!4.53e-10!9;CL:0002397!4.53e-10!9;CL:0000624!4.78e-09!6;CL:0000048!8.14e-09!430;CL:0000723!2.60e-08!436;CL:0000034!4.57e-08!444;CL:0000990!7.43e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.61e-20;18!CL:0000789;8.61e-20;18!CL:0002419;8.61e-20;18!CL:0000542;8.13e-18;53!CL:0000624;1.03e-16;6!CL:0000236;1.78e-14;13!CL:0000084;1.10e-13;25!CL:0000775;3.80e-13;3!CL:0000226;1.88e-12;3!CL:0000842;1.88e-12;3!CL:0000094;2.45e-12;8!CL:0000623;9.03e-12;3!CL:0000945;2.05e-09;24!CL:0002087;2.20e-09;104!CL:0000081;7.04e-09;11!CL:0000738;9.87e-09;136!CL:0000625;1.98e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.24e-38,136;CL:0002087,2.13e-30,115;CL:0000037,2.49e-29,168;CL:0000838,5.90e-28,52;CL:0000988,2.26e-27,177;CL:0000542,2.51e-27,53;CL:0000051,2.51e-27,53;CL:0002031,1.25e-26,120;CL:0002032,1.19e-25,161;CL:0000837,1.19e-25,161;CL:0000791,9.20e-20,18;CL:0000789,9.20e-20,18;CL:0002420,9.20e-20,18;CL:0002419,9.20e-20,18;CL:0000790,9.20e-20,18;CL:0000624,8.79e-17,6;CL:0000084,1.15e-13,25;CL:0000827,1.15e-13,25;CL:0000236,1.93e-13,14;CL:0000775,2.71e-13,3;CL:0000226,1.43e-12,3;CL:0000842,1.43e-12,3;CL:0000094,2.16e-12,8;CL:0000623,1.05e-11,3;CL:0000825,1.05e-11,3;CL:0000766,1.35e-09,72;CL:0000945,1.77e-09,24;CL:0000826,1.77e-09,24;CL:0000134,4.31e-09,354;CL:0000081,6.43e-09,11;CL:0002320,9.70e-09,361;CL:0000625,2.26e-08,11;CL:0000219,1.66e-07,386;CL:0000860,5.12e-07,42;CL:0002057,5.12e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;8.61e-20;18!CL:0000051;8.13e-18;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.73e-23!102;UBERON:0003061!2.73e-23!102;UBERON:0002193!1.20e-20!112;UBERON:0002384!6.99e-14!375;UBERON:0002371!1.05e-13!80;UBERON:0001474!1.80e-13!86;UBERON:0002405!2.24e-11!115;UBERON:0004765!6.07e-11!101;UBERON:0001434!6.07e-11!101;UBERON:0000178!1.93e-08!15;UBERON:0000179!1.93e-08!15;UBERON:0000463!1.93e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-08;15!UBERON:0000179;1.71e-08;15!UBERON:0000463;1.71e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.04e-09,98;UBERON:0003061,4.04e-09,98;UBERON:0000178,1.69e-08,15;UBERON:0000179,1.69e-08,15;UBERON:0000463,1.69e-08,15;UBERON:0002384,2.92e-08,371;UBERON:0002193,6.68e-08,108 | |||
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|short_description=p@chr1:40840182..40840198,- | |||
}} |
Revision as of 05:42, 12 September 2013
Short description: | p@chr1:40840182..40840198, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:40840182..40840198, - |
Coexpression cluster: | C1852_Neutrophils_CD19_CD4_Peripheral_Eosinophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.04e-09 | 98 |
blood island | 4.04e-09 | 98 |
blood | 1.69e-08 | 15 |
haemolymphatic fluid | 1.69e-08 | 15 |
organism substance | 1.69e-08 | 15 |
connective tissue | 2.92e-08 | 371 |
hemolymphoid system | 6.68e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.