FFCP PHASE1:Hg19::chr1:3447967..3447983,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1953|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3232|TSSclassifier=S|UniProt=|association_with_transcript=28bp_to_ENST00000294599,uc001akk.2_5end|coexpression_cluster_id=C3974|description=CAGE_peak_1_at_MEGF6_5end|id=chr1:3447967..3447983,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000791;6.75e-07;18!CL:0000789;6.75e-07;18!CL:0002419;6.75e-07;18|ontology_enrichment_celltype_v019_2=CL:0000791,6.02e-07,18;CL:0000789,6.02e-07,18;CL:0002420,6.02e-07,18;CL:0002419,6.02e-07,18;CL:0000790,6.02e-07,18|ontology_enrichment_development_v019=CL:0000790;6.75e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.43e-08!110;UBERON:0001009!1.76e-08!113;UBERON:0004872!6.29e-08!84;UBERON:0001981!9.33e-07!60;UBERON:0007500!9.33e-07!60;UBERON:0004537!9.33e-07!60;UBERON:0006965!9.33e-07!60;UBERON:0000055!9.63e-07!69|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.19e-07,109;UBERON:0001009,2.06e-07,112;UBERON:0004872,5.05e-07,83|phase1_expression=40.5142785773341,6.42301571672949,45.6692269270947,18.0131937035635,10.2801051718276,32.2765253917136,0,0,0,1.72013755551056,0,0.436882744260345,2.37390280405608,0.495065411840187,0.994192127183747,0,1.20538905604795,1.46062018077475,0.975865597581014,3.57051068422685,4.69201589861782,6.58254915103984,1.14494394852423,0.410623275218653,1.75759695432724,0,0,0,3.93364276848904,0.767658796194425,1.54816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0,0.142169232487422,3.22960483268332,4.9859586767869,0.802177789880567,3.25516306073778,3.13481663935894,2.91504299417082,4.12120908214698,0.436194716338694,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,0.575384784644301,0.256160706529101,0.47296445977717,1.72372840368309,0,0,0.376484679085209,0.545812300115692,1.57306439111559,1.22433556948361,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0.870627715885752,0.56738522469114,0,0.75374599577023,1.5644487552606,0.434377689410233,0,0.736555271975129,1.26584954976354,0.211255286311942,0,0.209658645508376,2.2465726229299,2.4028302854641,0.16072558669708,0,0,0,3.51992488922645,4.91524750135918,6.22656477704488,6.40095333849761,7.20712776664822,6.32227683949932,9.91567309177293,2.86216126360609,11.9534723512984,2.93618594685469,6.88091810625412,5.28685314316103,2.24203425192614,2.10707267820062,11.2124568964885,11.0043013569766,13.7753004329671,7.02183280640848,28.0293149304888,23.1989424810019,21.4309401248702,3.45372416344038,13.2572658363677,15.2858387262699,9.47813523177554,6.53265730600943,7.41338281091306,2.13769275984779,2.48715016007264,3.76744011455568,13.4940772477475,12.0393372640371,11.4989076185474,3.85251765171725,12.2630557952615,14.0887252647878,3.79529538029254,10.5126586726952,7.1619179924206,6.65316431113862,5.87242964403314,4.60751800155906,4.99722906209383,9.23431282971666,9.85353596305256,6.04820229674197,3.7441627409691,10.1377082717959,2.43806866313962,0.670700859703636,4.73091478821062,23.8549840573814,17.0454889616202,36.0667832212451,2.3858578411533,2.43317435151318,0.567208902984407,1.77383517970051,0.87834785693126,3.66741411393595,1.09288586487763,0.370784442784429,0.649094787309367,0.696518949197069,1.06366368415092,0.953962497221368,0,0,5.16782259153433,3.4409383804245,5.20710752411391,7.91431118693613,7.1314904155684,3.02629846134074,1.04497483268405,6.71883573840255,6.04802646567407,5.35552980423472,4.43112248820062,3.04108842287405,23.4299575246243,1.10298924103761,2.43042584364528,1.60739510911344,1.57170560838319,1.91439516821648,4.5994991239765,0,3.66403487860815,9.22462922052443,23.2668158488995,0.436094052142534,12.9212707440783,32.7973025211262,31.6457942143593,58.8015072535068,14.5414036701326,18.5023608046961,13.8773694448616,20.2267389702071,1.55605517699883,0.808264032418128,0.980771418680752,0.756787138224657,0.576175924479999,0,0,2.2818872861778,1.04614076386261,0,0.161872944368132,0,0.408308342509787,0.491337269247072,0.413303124703062,1.18800285728205,2.47266929278557,0,0,0.673344455816265,0.500474079487857,0.554128230968366,0,0.30648779579902,0.901428353439581,2.7223723958405,20.6298081042191,24.5590997141353,10.3846631568185,24.607469878921,6.80146692973697,21.1265242837416,15.447699075522,21.6033705268821,5.84622030967192,27.5152813926085,12.7028860126373,7.75901072730297,24.1406522911298,9.47069723339819,7.29110546935097,4.05847791642923,0.818238361772504,1.72082757233402,0.731842236777572,1.32529768321485,1.04574548582567,0.932949495138334,0.252320850875628,1.45990943630332,6.25798129319264,42.4539019207304,5.52539685409922,0.464367928031979,0.721879481669586,5.67872640191251,5.56329477257736,4.82022059766964,4.74264082749294,5.44698610231015,5.45722423955522,7.14605933248871,4.12065076763227,3.46272441251751,2.95262181849859,8.4145064282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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3232 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENST00000294599,uc001akk.2_5end | |||
|coexpression_cluster_id=C3974 | |||
|description=CAGE_peak_1_at_MEGF6_5end | |||
|id=chr1:3447967..3447983,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.75e-07;18!CL:0000789;6.75e-07;18!CL:0002419;6.75e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.02e-07,18;CL:0000789,6.02e-07,18;CL:0002420,6.02e-07,18;CL:0002419,6.02e-07,18;CL:0000790,6.02e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;6.75e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.43e-08!110;UBERON:0001009!1.76e-08!113;UBERON:0004872!6.29e-08!84;UBERON:0001981!9.33e-07!60;UBERON:0007500!9.33e-07!60;UBERON:0004537!9.33e-07!60;UBERON:0006965!9.33e-07!60;UBERON:0000055!9.63e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.19e-07,109;UBERON:0001009,2.06e-07,112;UBERON:0004872,5.05e-07,83 | |||
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| |||
|short_description=p1@MEGF6 | |||
}} |
Revision as of 05:24, 12 September 2013
Short description: | p1@MEGF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MEGF6_5end |
Coexpression cluster: | C3974_basal_Olfactory_Preadipocyte_tenocyte_Fibroblast_mesodermal_spindle |
Association with transcript: | 28bp_to_ENST00000294599, uc001akk.2_5end |
EntrezGene: | MEGF6 |
HGNC: | 3232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.02e-07 | 18 |
alpha-beta T cell | 6.02e-07 | 18 |
immature T cell | 6.02e-07 | 18 |
mature T cell | 6.02e-07 | 18 |
immature alpha-beta T cell | 6.02e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.19e-07 | 109 |
circulatory system | 2.06e-07 | 112 |
splanchnic layer of lateral plate mesoderm | 5.05e-07 | 83 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.