FFCP PHASE1:Hg19::chr1:26872324..26872362,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6195|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10430|TSSclassifier=S|UniProt=E9PAN7,Q15418|association_with_transcript=0bp_to_ENST00000374163,ENST00000530607,ENST00000531382,NM_001006665,uc001bms.1,uc009vsl.1_5end|description=CAGE_peak_1_at_RPS6KA1_5end|id=chr1:26872324..26872362,+|ontology_enrichment_celltype=CL:0000037!3.92e-85!172;CL:0000566!3.92e-85!172;CL:0000988!1.43e-81!182;CL:0002032!8.47e-81!165;CL:0000837!8.47e-81!165;CL:0000738!1.24e-68!140;CL:0002031!1.24e-57!124;CL:0002087!1.60e-56!119;CL:0000763!5.64e-48!112;CL:0000049!5.64e-48!112;CL:0000766!1.45e-32!76;CL:0000557!3.79e-28!71;CL:0000839!7.36e-28!70;CL:0000542!8.42e-28!53;CL:0000051!8.42e-28!53;CL:0000838!3.67e-27!52;CL:0002009!6.06e-26!65;CL:0002194!3.32e-25!63;CL:0000576!3.32e-25!63;CL:0000040!3.32e-25!63;CL:0000559!3.32e-25!63;CL:0002057!1.24e-20!42;CL:0000860!4.84e-18!45;CL:0000134!1.87e-14!358;CL:0000084!1.93e-14!25;CL:0000827!1.93e-14!25;CL:0002320!3.80e-13!365;CL:0000945!4.87e-12!24;CL:0000826!4.87e-12!24;CL:0000791!1.99e-11!18;CL:0000789!1.99e-11!18;CL:0002420!1.99e-11!18;CL:0002419!1.99e-11!18;CL:0000790!1.99e-11!18;CL:0000219!1.64e-09!390;CL:0000625!4.57e-08!11;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9;CL:0000094!2.29e-07!8;CL:0000236!2.80e-07!14|ontology_enrichment_celltype_v019=CL:0000542;2.67e-18;53!CL:0002087;7.58e-18;104!CL:0000576;2.61e-17;48!CL:0000738;2.72e-17;136!CL:0000763;5.07e-17;100!CL:0000473;1.01e-16;39!CL:0000234;1.01e-16;39!CL:0000766;1.06e-16;69!CL:0000084;2.39e-16;25!CL:0000988;3.67e-16;177!CL:0000860;3.59e-15;33!CL:0002057;3.59e-15;33!CL:0000945;1.31e-13;24!CL:0000791;6.90e-13;18!CL:0000789;6.90e-13;18!CL:0002419;6.90e-13;18!CL:0000625;4.93e-09;11!CL:0000094;3.12e-08;8!CL:0000236;8.86e-08;13!CL:0000451;2.76e-07;10!CL:0000219;7.67e-07;193!CL:0000081;8.29e-07;11|ontology_enrichment_celltype_v019_2=CL:0000037,4.59e-103,168;CL:0000988,1.66e-100,177;CL:0002032,4.81e-98,161;CL:0000837,4.81e-98,161;CL:0000738,1.65e-83,136;CL:0002031,1.09e-70,120;CL:0002087,1.72e-69,115;CL:0000763,7.56e-60,108;CL:0000049,7.56e-60,108;CL:0000766,1.23e-41,72;CL:0000557,2.57e-36,67;CL:0000839,5.36e-36,66;CL:0002009,8.26e-34,61;CL:0002194,5.69e-33,59;CL:0000576,5.69e-33,59;CL:0000040,5.69e-33,59;CL:0000559,5.69e-33,59;CL:0000542,9.65e-32,53;CL:0000051,9.65e-32,53;CL:0000838,5.25e-31,52;CL:0000473,2.92e-28,48;CL:0000234,2.92e-28,48;CL:0000860,1.72e-23,42;CL:0002057,1.72e-23,42;CL:0000134,8.50e-22,354;CL:0002320,2.34e-20,361;CL:0000084,2.29e-16,25;CL:0000827,2.29e-16,25;CL:0000219,1.97e-15,386;CL:0000945,1.32e-13,24;CL:0000826,1.32e-13,24;CL:0000791,6.69e-13,18;CL:0000789,6.69e-13,18;CL:0002420,6.69e-13,18;CL:0002419,6.69e-13,18;CL:0000790,6.69e-13,18;CL:0000048,3.62e-10,427;CL:0000034,1.70e-09,441;CL:0000723,1.95e-09,433;CL:0000625,4.85e-09,11;CL:0002393,1.36e-08,9;CL:0002397,1.36e-08,9;CL:0000094,3.08e-08,8;CL:0000236,3.88e-08,14;CL:0000451,2.69e-07,10;CL:0000081,8.22e-07,11|ontology_enrichment_development_v019=CL:0000051;2.67e-18;53!CL:0002057;5.64e-17;42!CL:0000049;2.10e-16;108!CL:0000790;6.90e-13;18|ontology_enrichment_disease=DOID:2531!2.88e-19!51;DOID:0060083!2.88e-19!51;DOID:1240!3.66e-16!39;DOID:8692!9.55e-13!31|ontology_enrichment_disease_v019=DOID:8692;3.31e-14;31!DOID:1240;3.69e-14;39!DOID:2531;3.53e-13;51!DOID:0060083;3.53e-13;51|ontology_enrichment_disease_v019_2=DOID:2531,1.40e-22,51;DOID:0060083,1.40e-22,51;DOID:1240,8.41e-19,39;DOID:8692,7.30e-15,31|ontology_enrichment_uberon=UBERON:0002390!8.46e-38!102;UBERON:0003061!8.46e-38!102;UBERON:0002193!9.67e-35!112;UBERON:0002371!7.85e-24!80;UBERON:0001474!8.63e-21!86;UBERON:0007023!2.70e-20!115;UBERON:0002405!2.05e-19!115;UBERON:0004765!9.42e-16!101;UBERON:0001434!9.42e-16!101;UBERON:0000178!1.44e-12!15;UBERON:0000179!1.44e-12!15;UBERON:0000463!1.44e-12!15;UBERON:0002384!4.58e-12!375|ontology_enrichment_uberon_v019=UBERON:0000178;3.29e-14;15!UBERON:0000179;3.29e-14;15!UBERON:0000463;3.29e-14;15!UBERON:0002390;2.28e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.86e-48,98;UBERON:0003061,4.86e-48,98;UBERON:0002193,8.69e-44,108;UBERON:0002405,1.86e-31,93;UBERON:0002371,2.57e-31,76;UBERON:0001474,3.62e-27,82;UBERON:0004765,2.72e-23,90;UBERON:0002384,6.74e-19,371;UBERON:0001434,1.38e-18,100;UBERON:0000178,3.26e-14,15;UBERON:0000179,3.26e-14,15;UBERON:0000463,3.26e-14,15;UBERON:0003081,2.97e-11,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0,0,29.0370941842215,31.1161234015294,25.8171362708868,38.5496991311926,29.1710342553882,40.0973759388637,0,0,0.369754010166788,25.176840188598,32.9832619370818,15.2672228454121,37.6716877801677,38.3039894667971,41.2320654360118,26.4220259603111,35.6283032620877,34.2575504953468,48.5630117523746,15.4929136912412,38.0856976064871,31.1454909453617,10.6903650885675,14.5561994320699,22.4400066011277,15.369642391746,14.8983804829809,15.1688099524112,10.973239620925,25.7310324529249,38.9661642853192,20.1950551042806,17.9778787556068,21.731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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6195 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10430 | |||
|TSSclassifier=S | |||
|UniProt=E9PAN7,Q15418 | |||
|association_with_transcript=0bp_to_ENST00000374163,ENST00000530607,ENST00000531382,NM_001006665,uc001bms.1,uc009vsl.1_5end | |||
|description=CAGE_peak_1_at_RPS6KA1_5end | |||
|id=chr1:26872324..26872362,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.92e-85!172;CL:0000566!3.92e-85!172;CL:0000988!1.43e-81!182;CL:0002032!8.47e-81!165;CL:0000837!8.47e-81!165;CL:0000738!1.24e-68!140;CL:0002031!1.24e-57!124;CL:0002087!1.60e-56!119;CL:0000763!5.64e-48!112;CL:0000049!5.64e-48!112;CL:0000766!1.45e-32!76;CL:0000557!3.79e-28!71;CL:0000839!7.36e-28!70;CL:0000542!8.42e-28!53;CL:0000051!8.42e-28!53;CL:0000838!3.67e-27!52;CL:0002009!6.06e-26!65;CL:0002194!3.32e-25!63;CL:0000576!3.32e-25!63;CL:0000040!3.32e-25!63;CL:0000559!3.32e-25!63;CL:0002057!1.24e-20!42;CL:0000860!4.84e-18!45;CL:0000134!1.87e-14!358;CL:0000084!1.93e-14!25;CL:0000827!1.93e-14!25;CL:0002320!3.80e-13!365;CL:0000945!4.87e-12!24;CL:0000826!4.87e-12!24;CL:0000791!1.99e-11!18;CL:0000789!1.99e-11!18;CL:0002420!1.99e-11!18;CL:0002419!1.99e-11!18;CL:0000790!1.99e-11!18;CL:0000219!1.64e-09!390;CL:0000625!4.57e-08!11;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9;CL:0000094!2.29e-07!8;CL:0000236!2.80e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.67e-18;53!CL:0002087;7.58e-18;104!CL:0000576;2.61e-17;48!CL:0000738;2.72e-17;136!CL:0000763;5.07e-17;100!CL:0000473;1.01e-16;39!CL:0000234;1.01e-16;39!CL:0000766;1.06e-16;69!CL:0000084;2.39e-16;25!CL:0000988;3.67e-16;177!CL:0000860;3.59e-15;33!CL:0002057;3.59e-15;33!CL:0000945;1.31e-13;24!CL:0000791;6.90e-13;18!CL:0000789;6.90e-13;18!CL:0002419;6.90e-13;18!CL:0000625;4.93e-09;11!CL:0000094;3.12e-08;8!CL:0000236;8.86e-08;13!CL:0000451;2.76e-07;10!CL:0000219;7.67e-07;193!CL:0000081;8.29e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.59e-103,168;CL:0000988,1.66e-100,177;CL:0002032,4.81e-98,161;CL:0000837,4.81e-98,161;CL:0000738,1.65e-83,136;CL:0002031,1.09e-70,120;CL:0002087,1.72e-69,115;CL:0000763,7.56e-60,108;CL:0000049,7.56e-60,108;CL:0000766,1.23e-41,72;CL:0000557,2.57e-36,67;CL:0000839,5.36e-36,66;CL:0002009,8.26e-34,61;CL:0002194,5.69e-33,59;CL:0000576,5.69e-33,59;CL:0000040,5.69e-33,59;CL:0000559,5.69e-33,59;CL:0000542,9.65e-32,53;CL:0000051,9.65e-32,53;CL:0000838,5.25e-31,52;CL:0000473,2.92e-28,48;CL:0000234,2.92e-28,48;CL:0000860,1.72e-23,42;CL:0002057,1.72e-23,42;CL:0000134,8.50e-22,354;CL:0002320,2.34e-20,361;CL:0000084,2.29e-16,25;CL:0000827,2.29e-16,25;CL:0000219,1.97e-15,386;CL:0000945,1.32e-13,24;CL:0000826,1.32e-13,24;CL:0000791,6.69e-13,18;CL:0000789,6.69e-13,18;CL:0002420,6.69e-13,18;CL:0002419,6.69e-13,18;CL:0000790,6.69e-13,18;CL:0000048,3.62e-10,427;CL:0000034,1.70e-09,441;CL:0000723,1.95e-09,433;CL:0000625,4.85e-09,11;CL:0002393,1.36e-08,9;CL:0002397,1.36e-08,9;CL:0000094,3.08e-08,8;CL:0000236,3.88e-08,14;CL:0000451,2.69e-07,10;CL:0000081,8.22e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;2.67e-18;53!CL:0002057;5.64e-17;42!CL:0000049;2.10e-16;108!CL:0000790;6.90e-13;18 | |||
|ontology_enrichment_disease=DOID:2531!2.88e-19!51;DOID:0060083!2.88e-19!51;DOID:1240!3.66e-16!39;DOID:8692!9.55e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.31e-14;31!DOID:1240;3.69e-14;39!DOID:2531;3.53e-13;51!DOID:0060083;3.53e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.40e-22,51;DOID:0060083,1.40e-22,51;DOID:1240,8.41e-19,39;DOID:8692,7.30e-15,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.46e-38!102;UBERON:0003061!8.46e-38!102;UBERON:0002193!9.67e-35!112;UBERON:0002371!7.85e-24!80;UBERON:0001474!8.63e-21!86;UBERON:0007023!2.70e-20!115;UBERON:0002405!2.05e-19!115;UBERON:0004765!9.42e-16!101;UBERON:0001434!9.42e-16!101;UBERON:0000178!1.44e-12!15;UBERON:0000179!1.44e-12!15;UBERON:0000463!1.44e-12!15;UBERON:0002384!4.58e-12!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.29e-14;15!UBERON:0000179;3.29e-14;15!UBERON:0000463;3.29e-14;15!UBERON:0002390;2.28e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.86e-48,98;UBERON:0003061,4.86e-48,98;UBERON:0002193,8.69e-44,108;UBERON:0002405,1.86e-31,93;UBERON:0002371,2.57e-31,76;UBERON:0001474,3.62e-27,82;UBERON:0004765,2.72e-23,90;UBERON:0002384,6.74e-19,371;UBERON:0001434,1.38e-18,100;UBERON:0000178,3.26e-14,15;UBERON:0000179,3.26e-14,15;UBERON:0000463,3.26e-14,15;UBERON:0003081,2.97e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0,0,29.0370941842215,31.1161234015294,25.8171362708868,38.5496991311926,29.1710342553882,40.0973759388637,0,0,0.369754010166788,25.176840188598,32.9832619370818,15.2672228454121,37.6716877801677,38.3039894667971,41.2320654360118,26.4220259603111,35.6283032620877,34.2575504953468,48.5630117523746,15.4929136912412,38.0856976064871,31.1454909453617,10.6903650885675,14.5561994320699,22.4400066011277,15.369642391746,14.8983804829809,15.1688099524112,10.973239620925,25.7310324529249,38.9661642853192,20.1950551042806,17.9778787556068,21.7319563583341,7.38136762275015,17.2621023965741,37.2731969210989,23.7361752569742,31.9668562899521,18.2831820336008,13.6172453925874,15.5705562248894,26.8836071824715,20.3378338183879,19.3298071787554,23.005181100068,16.5724936194404,18.0383560841304,70.7705209145005,71.0098361883245,53.8822718956526,66.3862210075786,65.1767714932137,43.7173595816058,82.9387084287033,102.044255403133,87.4961296532597,36.9592113368778,32.7683166757279,24.016749854316,45.6601338146163,33.232866923989,22.4153451582248,26.4417949113945,25.7594513724548,22.1993057952685,15.2681669236444,18.7313881781362,15.8605594294831,8.96813700770458,19.2270381885806,22.424913792977,20.8295704257057,31.4570293469249,81.9213827414323,33.8959157298934,20.8317034523283,48.7066821019778,83.7806635776505,41.539432953952,46.3005839679768,53.0775572979431,111.439448161337,104.047478047903,101.458187140468,134.029758626136,80.5652578343446,36.3302079747048,23.5435928718948,41.8142095219907,84.5287696523844,37.1723878793864,35.3936268847109,42.254288567257,45.5548542483458,50.7845094008006,43.7207940446252,50.4426648910539,47.099072904826,49.9722906209383,48.3025594169794,48.4465518183417,32.2570789159572,34.4997852560724,24.6201486600758,0,0,0,0,0,0,0,0,0,0,0.351339142772504,3.53643503843824,0,0,140.204474058823,155.671985145545,153.832360320327,17.8867968229006,26.883760806666,15.6012150558417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,181.856976061767,217.156947923062,0,0,0,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,14.1268191812688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.5955420531197,135.722473780758,105.974018711863,0,1.34385702559088,0.141775097242386,0,0,0,13.3019074231905,20.4272366910684,10.1590776614978,6.91775776401415,13.8866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,63.244365933419,32.1444538516561,73.7918788190611,0,0,0,0,0,0,39.7902261177022,43.7408287648278,47.0068113193748,42.2248589360372,0,0,0,0,0,177.514664675482,248.304011139341,188.14464309996,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,34.5302603625222,50.2614087907377,45.3592120664638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0119419903064,37.1238340455359,0,0,0,2.7821073144885,0,0,0,0,0,0,0,0,0,0.322260734604821,0,0.93749290157711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88664646389525,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,3.01260162485693,0,0,0.443430153536676,0,82.2065126956114,91.756464857085,104.245435252872,95.7691737340312,107.776915548583,100.513363234871,88.0251242698127,116.589400915258,0,0,0,44.5927620301725,5.62649930608135,13.8726594529408,14.348364545594,39.3171361722649,50.5574177149448,74.7207747015306,4.22008522356922,26.1141375645517,114.345574195629,57.0314820613805,45.1142058762121,76.1813000107215,119.316939802049,54.8895203559649,29.8092366383228,44.9992001630052,23.6575388517513,31.0909789970458,28.6980523744483,27.1589452608836,31.7383038240576,20.9248578211111,51.9274902673888,20.6504620158648,25.3776609158129,0,11.2811298039358,0,12.81598919191,0,0.23874448473769,1.18785872333055,0,0.994147647766298,0.984685914873589,0,13.678721560821,0,0.996239941255349,27.0758237220525,0,0,38.1562896929315,0,0,0,51.668809392914,1.28236427328014,83.8190823214289,0,0.969332746095218,0.649376687132959,0,0,0,2.17499872630438,0,0,0,0,0,0,1.77148277162768,1.5677537021303,1.52581736317083,0.110579259931225,0,0.219385397153973,0,0,0.461701551022782,0,1.84451123510448,0,0,0.31900115973192,0.274792780205587,0.533034776018635,32.7018554226357,50.0767017900129,55.1822783908519,0,0,0,0,30.3568865852523,0,0,0,0,2.98578579323551,2.0345239835768,4.888241159469,67.6068173391818,80.8108160710129,73.8263183003569,1.01101699471016,1.60515529459758,0.234264445725339,28.0980375392126,0,0,0,7.25944296291983,0.61214552326098,6.06591164433484,0.450970258243478,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,1.74580229679155,0,0.225980740780532,0,0,0.443175571691151,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,4.51787750343577,43.4338399427706,0,64.1445144441527,0.558564802544508,0.4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| |||
|short_description=p1@RPS6KA1 | |||
}} |
Revision as of 04:59, 12 September 2013
Short description: | p1@RPS6KA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RPS6KA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374163, ENST00000530607, ENST00000531382, NM_001006665, uc001bms.1, uc009vsl.1_5end |
EntrezGene: | RPS6KA1 |
HGNC: | 10430 |
UniProt: | E9PAN7Q15418 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.86e-48 | 98 |
blood island | 4.86e-48 | 98 |
hemolymphoid system | 8.69e-44 | 108 |
immune system | 1.86e-31 | 93 |
bone marrow | 2.57e-31 | 76 |
bone element | 3.62e-27 | 82 |
skeletal element | 2.72e-23 | 90 |
connective tissue | 6.74e-19 | 371 |
skeletal system | 1.38e-18 | 100 |
blood | 3.26e-14 | 15 |
haemolymphatic fluid | 3.26e-14 | 15 |
organism substance | 3.26e-14 | 15 |
lateral plate mesoderm | 2.97e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.40e-22 | 51 |
immune system cancer | 1.40e-22 | 51 |
leukemia | 8.41e-19 | 39 |
myeloid leukemia | 7.30e-15 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.