FFCP PHASE1:Hg19::chr1:249132608..249132628,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79894|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26179|TSSclassifier=S|UniProt=Q499Z4|association_with_transcript=78bp_to_ENST00000505503,NM_024836,uc001iex.2_5end|description=CAGE_peak_5_at_ZNF672_5end|id=chr1:249132608..249132628,+|ontology_enrichment_celltype=CL:0000557!2.52e-08!71;CL:0000766!4.03e-08!76;CL:0000839!3.43e-07!70;CL:0002009!4.93e-07!65|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000557,1.07e-09,67;CL:0000766,6.32e-09,72;CL:0000839,1.63e-08,66;CL:0002009,9.78e-08,61;CL:0002194,6.06e-07,59;CL:0000576,6.06e-07,59;CL:0000040,6.06e-07,59;CL:0000559,6.06e-07,59|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000922!1.09e-12!612;UBERON:0002050!4.89e-12!605;UBERON:0005423!4.89e-12!605;UBERON:0000923!5.52e-12!604;UBERON:0005291!5.52e-12!604;UBERON:0006598!5.52e-12!604;UBERON:0002532!5.52e-12!604;UBERON:0000468!2.99e-11!659;UBERON:0000467!1.77e-10!625;UBERON:0000480!2.24e-10!626;UBERON:0000062!7.39e-10!511;UBERON:0000477!2.20e-08!286;UBERON:0003081!4.46e-07!216;UBERON:0000926!5.71e-07!448;UBERON:0004120!5.71e-07!448;UBERON:0006603!5.71e-07!448|ontology_enrichment_uberon_v019=UBERON:0001737;2.38e-07;9!UBERON:0001557;2.38e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000922,8.40e-09,592;UBERON:0005423,2.33e-08,581;UBERON:0000923,5.32e-08,560;UBERON:0010316,5.32e-08,560;UBERON:0005291,5.32e-08,560;UBERON:0006598,5.32e-08,560;UBERON:0010317,5.32e-08,560;UBERON:0002532,5.32e-08,560;UBERON:0002050,1.49e-07,564;UBERON:0001737,1.56e-07,9;UBERON:0002371,5.52e-07,76|phase1_expression=0.726713517082227,1.49870366723688,0.704772020479856,0,0.893922188854576,0.872338524100369,5.06599756336621,0,0.522371256399677,0.491467873003018,1.39560233594486,0.655324116390517,0.263766978228454,0.866364470720326,1.32558950291166,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,1.23121058076788,1.63200552995402,1.25381888591235,1.71741592278634,0.684372125364421,0.753255837568817,0.61130724598361,0.328402357799783,0.236132343941038,0.393364276848904,0.383829398097213,0.77408061658038,0,1.204823675113,0,0.0774672005803016,0.284338464974843,0,0,0.601633342410425,0.651032612147555,2.01523926815932,2.59114932815184,1.28787783817093,1.45398238779565,1.51150377475524,1.94067248950253,1.39457422143411,1.6446715520873,1.54853185447552,1.1507695692886,1.0246428261164,0.47296445977717,2.06847408441971,1.93645405075148,0,1.12945403725563,3.27487380069415,0.449446968890169,0.612167784741805,1.60464513538047,3.19668562899521,2.63881040149373,1.59570926097305,3.40979800426155,0.580418477257168,1.70215567407342,2.4912889959823,2.26123798731069,1.0429658368404,1.3031330682307,0,0,0.949387162322653,0.633765858935825,1.4882300997553,0.838634582033504,1.01095768031846,1.50176892841506,0.803627933485401,0.285012743741249,0.39783335439818,0.91332076882317,0,1.09227722252426,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,0,0.560508562981536,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0,1.2786256184353,1.44575660953827,1.50401373190767,0.869079113764942,0.795285947051099,0.486634870302636,1.22895262313288,0.886917589850256,0.614843499851882,0.916853528483988,0.364295288292542,0.370784442784429,1.62273696827342,1.56716763569341,1.86141144726411,0.238490624305342,0,0,0.993812036833525,1.72046919021225,0.694281003215189,1.69592382577203,1.67799774483962,3.57653454522088,0.835979866147242,0.258416759169329,1.06729878806013,0.33472061276467,4.02829317109147,0.760272105718513,4.88124115096339,1.10298924103761,0.81014194788176,0.625098097988558,0.898117490504679,0.563057402416611,1.53316637465883,0.949265659568129,2.01521918323448,2.63560834872127,0,0,0,1.13967460498122,0.529636723252875,0.573673241497627,2.4826786753885,1.12135520028461,0,1.2333377420858,0.933633106199299,0.942974704487816,1.30769522490767,0.908144565869588,2.30470369792,0.70296429550139,0,0,1.04614076386261,0.469737994575059,0.161872944368132,0.140450806702248,0.816616685019573,0.491337269247072,0.826606249406124,0,0.741800787835671,0.910161361938026,0.718618141816238,0.336672227908132,0.500474079487857,0.277064115484183,0.438977620880838,1.22595118319608,1.20190447125277,0.907457465280168,0.538168907066586,0.640672166455702,0.423863802319124,0,0,0,0,0.506328996723799,0.389748020644795,0,0.368199594569197,0.161646056818812,1.42003837006646,1.0075209822764,0,0,0.818238361772504,0.286804595389004,0.731842236777572,0.530119073285941,0.464775771478074,1.24393266018445,1.00928340350251,1.45990943630332,0,2.57296375277154,0,1.39310378409594,0,2.60274960087657,3.20310911148393,2.89213235860178,2.53676137284506,4.35758888184812,3.08451804844426,1.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26179 | |||
|TSSclassifier=S | |||
|UniProt=Q499Z4 | |||
|association_with_transcript=78bp_to_ENST00000505503,NM_024836,uc001iex.2_5end | |||
|description=CAGE_peak_5_at_ZNF672_5end | |||
|id=chr1:249132608..249132628,+ | |||
|ontology_enrichment_celltype=CL:0000557!2.52e-08!71;CL:0000766!4.03e-08!76;CL:0000839!3.43e-07!70;CL:0002009!4.93e-07!65 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.07e-09,67;CL:0000766,6.32e-09,72;CL:0000839,1.63e-08,66;CL:0002009,9.78e-08,61;CL:0002194,6.06e-07,59;CL:0000576,6.06e-07,59;CL:0000040,6.06e-07,59;CL:0000559,6.06e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!1.09e-12!612;UBERON:0002050!4.89e-12!605;UBERON:0005423!4.89e-12!605;UBERON:0000923!5.52e-12!604;UBERON:0005291!5.52e-12!604;UBERON:0006598!5.52e-12!604;UBERON:0002532!5.52e-12!604;UBERON:0000468!2.99e-11!659;UBERON:0000467!1.77e-10!625;UBERON:0000480!2.24e-10!626;UBERON:0000062!7.39e-10!511;UBERON:0000477!2.20e-08!286;UBERON:0003081!4.46e-07!216;UBERON:0000926!5.71e-07!448;UBERON:0004120!5.71e-07!448;UBERON:0006603!5.71e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.38e-07;9!UBERON:0001557;2.38e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,8.40e-09,592;UBERON:0005423,2.33e-08,581;UBERON:0000923,5.32e-08,560;UBERON:0010316,5.32e-08,560;UBERON:0005291,5.32e-08,560;UBERON:0006598,5.32e-08,560;UBERON:0010317,5.32e-08,560;UBERON:0002532,5.32e-08,560;UBERON:0002050,1.49e-07,564;UBERON:0001737,1.56e-07,9;UBERON:0002371,5.52e-07,76 | |||
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| |||
|short_description=p5@ZNF672 | |||
}} |
Revision as of 04:50, 12 September 2013
Short description: | p5@ZNF672 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ZNF672_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENST00000505503, NM_024836, uc001iex.2_5end |
EntrezGene: | ZNF672 |
HGNC: | 26179 |
UniProt: | Q499Z4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.07e-09 | 67 |
myeloid leukocyte | 6.32e-09 | 72 |
myeloid lineage restricted progenitor cell | 1.63e-08 | 66 |
macrophage dendritic cell progenitor | 9.78e-08 | 61 |
monopoietic cell | 6.06e-07 | 59 |
monocyte | 6.06e-07 | 59 |
monoblast | 6.06e-07 | 59 |
promonocyte | 6.06e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
embryo | 8.40e-09 | 592 |
developing anatomical structure | 2.33e-08 | 581 |
germ layer | 5.32e-08 | 560 |
germ layer / neural crest | 5.32e-08 | 560 |
embryonic tissue | 5.32e-08 | 560 |
presumptive structure | 5.32e-08 | 560 |
germ layer / neural crest derived structure | 5.32e-08 | 560 |
epiblast (generic) | 5.32e-08 | 560 |
embryonic structure | 1.49e-07 | 564 |
larynx | 1.56e-07 | 9 |
bone marrow | 5.52e-07 | 76 |
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