FFCP PHASE1:Hg19::chr1:2488970..2488979,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8764|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11912|TSSclassifier=N|UniProt=|association_with_transcript=-272bp_to_ENST00000466750_5end|coexpression_cluster_id=C88|description=CAGE_peak_21_at_TNFRSF14_5end|id=chr1:2488970..2488979,+|ontology_enrichment_celltype=CL:0000148!1.44e-31!10;CL:0000541!1.44e-31!10;CL:0000147!2.61e-22!14;CL:0002567!1.19e-20!3;CL:0000710!2.36e-15!20;CL:0000075!3.86e-11!27;CL:0002077!5.99e-09!33;CL:0002566!7.26e-08!1;CL:0000325!1.97e-07!39|ontology_enrichment_celltype_v019=CL:0000148;1.30e-106;10!CL:0000147;3.01e-76;14!CL:0002567;1.72e-66;3!CL:0000710;1.89e-53;20!CL:0000075;1.22e-39;27!CL:0002077;1.02e-27;34!CL:0002566;5.13e-23;1!CL:0000149;9.63e-07;4|ontology_enrichment_celltype_v019_2=CL:0000148,1.52e-106,10;CL:0000541,1.52e-106,10;CL:0000147,3.37e-76,14;CL:0002567,1.23e-66,3;CL:0000710,2.04e-53,20;CL:0000075,1.29e-39,27;CL:0002077,1.74e-31,34;CL:0000333,6.55e-25,41;CL:0002566,6.40e-23,1;CL:0000133,1.47e-17,59;CL:0000221,1.83e-14,72;CL:0000149,9.63e-07,4|ontology_enrichment_development_v019=CL:0000133;1.34e-09;59!CL:0000221;4.50e-08;72|ontology_enrichment_disease=DOID:1909!2.70e-14!2;DOID:3493!3.07e-13!2|ontology_enrichment_disease_v019=DOID:1909;9.78e-45;2|ontology_enrichment_disease_v019_2=DOID:1909,7.83e-45,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001003;7.86e-07;15!UBERON:0007376;7.86e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001003,7.63e-07,15;UBERON:0007376,7.63e-07,15;UBERON:0007383,7.63e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,1.20645999155121,1.90994212779139,7.03304683260282,3.4214489204541,3.39330725920968,1.8020583470635,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42638588066636,2.85465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0|short_description=p21@TNFRSF14}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-272bp_to_ENST00000466750_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_21_at_TNFRSF14_5end | |||
|id=chr1:2488970..2488979,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.44e-31!10;CL:0000541!1.44e-31!10;CL:0000147!2.61e-22!14;CL:0002567!1.19e-20!3;CL:0000710!2.36e-15!20;CL:0000075!3.86e-11!27;CL:0002077!5.99e-09!33;CL:0002566!7.26e-08!1;CL:0000325!1.97e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.30e-106;10!CL:0000147;3.01e-76;14!CL:0002567;1.72e-66;3!CL:0000710;1.89e-53;20!CL:0000075;1.22e-39;27!CL:0002077;1.02e-27;34!CL:0002566;5.13e-23;1!CL:0000149;9.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.52e-106,10;CL:0000541,1.52e-106,10;CL:0000147,3.37e-76,14;CL:0002567,1.23e-66,3;CL:0000710,2.04e-53,20;CL:0000075,1.29e-39,27;CL:0002077,1.74e-31,34;CL:0000333,6.55e-25,41;CL:0002566,6.40e-23,1;CL:0000133,1.47e-17,59;CL:0000221,1.83e-14,72;CL:0000149,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.34e-09;59!CL:0000221;4.50e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!2.70e-14!2;DOID:3493!3.07e-13!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;9.78e-45;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.83e-45,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;7.86e-07;15!UBERON:0007376;7.86e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,7.63e-07,15;UBERON:0007376,7.63e-07,15;UBERON:0007383,7.63e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,1.20645999155121,1.90994212779139,7.03304683260282,3.4214489204541,3.39330725920968,1.8020583470635,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42638588066636,2.85465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p21@TNFRSF14 | |||
}} |
Revision as of 04:49, 12 September 2013
Short description: | p21@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_TNFRSF14_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -272bp_to_ENST00000466750_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.52e-106 | 10 |
melanoblast | 1.52e-106 | 10 |
pigment cell | 3.37e-76 | 14 |
light melanocyte | 1.23e-66 | 3 |
neurecto-epithelial cell | 2.04e-53 | 20 |
columnar/cuboidal epithelial cell | 1.29e-39 | 27 |
ecto-epithelial cell | 1.74e-31 | 34 |
migratory neural crest cell | 6.55e-25 | 41 |
dark melanocyte | 6.40e-23 | 1 |
neurectodermal cell | 1.47e-17 | 59 |
ectodermal cell | 1.83e-14 | 72 |
visual pigment cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 7.63e-07 | 15 |
outer epithelium | 7.63e-07 | 15 |
enveloping layer of ectoderm | 7.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.83e-45 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.