FFCP PHASE1:Hg19::chr1:2487402..2487416,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8764|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11912|TSSclassifier=S|UniProt=F6Q0M4|association_with_transcript=-2bp_to_ENST00000451778_5end|coexpression_cluster_id=C806|description=CAGE_peak_5_at_TNFRSF14_5end|id=chr1:2487402..2487416,+|ontology_enrichment_celltype=CL:0000766!6.10e-36!76;CL:0000557!3.21e-34!71;CL:0000839!2.95e-33!70;CL:0002009!4.21e-33!65;CL:0002057!7.39e-33!42;CL:0002194!5.99e-32!63;CL:0000576!5.99e-32!63;CL:0000040!5.99e-32!63;CL:0000559!5.99e-32!63;CL:0000860!2.97e-29!45;CL:0000738!1.54e-25!140;CL:0002031!2.89e-24!124;CL:0000763!6.46e-23!112;CL:0000049!6.46e-23!112;CL:0002087!3.22e-22!119;CL:0000037!5.51e-19!172;CL:0000566!5.51e-19!172;CL:0002032!1.29e-18!165;CL:0000837!1.29e-18!165;CL:0000988!3.76e-18!182;CL:0000115!2.36e-07!35;CL:0002393!2.41e-07!9;CL:0002397!2.41e-07!9|ontology_enrichment_celltype_v019=CL:0000473;8.26e-46;39!CL:0000234;8.26e-46;39!CL:0000860;6.86e-45;33!CL:0002057;6.86e-45;33!CL:0000576;1.88e-39;48!CL:0000766;1.67e-32;69!CL:0000763;7.06e-16;100!CL:0000235;5.41e-12;6!CL:0000738;3.72e-10;136!CL:0002087;4.50e-10;104!CL:0002393;1.42e-09;6!CL:0002397;1.42e-09;6!CL:0000148;2.06e-09;10!CL:0000147;5.18e-08;14!CL:0002567;5.48e-07;3!CL:0002619;6.33e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,2.14e-77,72;CL:0000557,2.82e-75,67;CL:0000839,6.04e-74,66;CL:0000473,4.15e-72,48;CL:0000234,4.15e-72,48;CL:0002194,4.57e-72,59;CL:0000576,4.57e-72,59;CL:0000040,4.57e-72,59;CL:0000559,4.57e-72,59;CL:0002009,6.41e-72,61;CL:0000860,3.25e-61,42;CL:0002057,3.25e-61,42;CL:0000763,5.94e-51,108;CL:0000049,5.94e-51,108;CL:0000738,8.65e-38,136;CL:0002031,2.83e-37,120;CL:0002087,3.04e-33,115;CL:0002032,2.40e-30,161;CL:0000837,2.40e-30,161;CL:0000037,2.37e-29,168;CL:0000988,6.86e-27,177;CL:0002393,1.76e-13,9;CL:0002397,1.76e-13,9;CL:0000235,5.34e-12,6;CL:0000148,2.06e-09,10;CL:0000541,2.06e-09,10;CL:0000219,3.40e-09,386;CL:0000147,5.62e-08,14;CL:0000134,7.57e-08,354;CL:0002320,2.25e-07,361;CL:0002567,5.45e-07,3;CL:0002619,6.47e-07,3|ontology_enrichment_development_v019=CL:0002057;1.41e-44;42!CL:0000049;5.52e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.17e-32!115;UBERON:0002371!4.35e-29!80;UBERON:0002193!2.52e-28!112;UBERON:0002390!1.61e-26!102;UBERON:0003061!1.61e-26!102;UBERON:0001474!8.14e-26!86;UBERON:0004765!7.19e-21!101;UBERON:0001434!7.19e-21!101;UBERON:0003081!1.97e-11!216;UBERON:0002204!9.87e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.68e-64,76;UBERON:0002405,3.01e-59,93;UBERON:0001474,2.59e-58,82;UBERON:0004765,1.43e-51,90;UBERON:0002193,4.29e-50,108;UBERON:0002390,2.09e-49,98;UBERON:0003061,2.09e-49,98;UBERON:0001434,1.15e-44,100;UBERON:0003081,2.17e-22,203;UBERON:0002204,6.28e-22,167;UBERON:0000926,2.97e-09,315;UBERON:0004120,2.97e-09,315;UBERON:0006603,2.97e-09,315;UBERON:0002384,4.04e-07,371|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.152826811495903,0,0.0787107813136792,1.18009283054671,0.767658796194425,3.40595471295367,0,0,0,0,0.426507697462265,0,2.76997704265939,1.60435557976113,1.95309783644267,21.0480545785529,24.6159186174424,20.0908942754665,4.79814187972564,24.9398122834614,7.76268995801012,15.5727454726809,62.9086868673393,53.2694957939578,7.48000220037591,15.369642391746,17.2632027818667,12.0660988257816,49.7023206359546,59.5876541015104,9.41211697713024,41.7546409588504,25.1690302578495,10.4068523406107,43.6463476823487,26.8521592835597,1.64925650093358,9.77371922345996,2.55734850319616,3.77272010217159,19.8584828641899,16.1933784738849,10.5524439407832,27.1171117578505,19.5469960234605,1.21079900526674,20.9918252512912,13.2914202725171,4.01385043992689,2.76385589954557,3.98351426465914,1.12328631146495,0.901061357049038,0.32145117339416,1.71007646244749,1.9891667719909,1.27864907635244,0,0,0,0.853460445133014,0,0,0,0.954053754535364,0.569212969109448,1.17447437874188,4.20500550937752,0,2.24203425192614,0,0,0,0.822405995998037,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.384273959177026,1.30059347559878,0,0.552700035571697,0.869409257205157,0,0,0,0.339928028092699,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,1.62273696827342,2.43781632218974,2.79211717089617,0,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,1.29208379584664,2.13459757612026,0.66944122552934,0.402829317109147,0,0.732186172644509,0.367663080345869,1.62028389576352,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.549605231791222,13.1780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0.300091096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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |||
|TSSclassifier=S | |||
|UniProt=F6Q0M4 | |||
|association_with_transcript=-2bp_to_ENST00000451778_5end | |||
|coexpression_cluster_id=C806 | |||
|description=CAGE_peak_5_at_TNFRSF14_5end | |||
|id=chr1:2487402..2487416,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.10e-36!76;CL:0000557!3.21e-34!71;CL:0000839!2.95e-33!70;CL:0002009!4.21e-33!65;CL:0002057!7.39e-33!42;CL:0002194!5.99e-32!63;CL:0000576!5.99e-32!63;CL:0000040!5.99e-32!63;CL:0000559!5.99e-32!63;CL:0000860!2.97e-29!45;CL:0000738!1.54e-25!140;CL:0002031!2.89e-24!124;CL:0000763!6.46e-23!112;CL:0000049!6.46e-23!112;CL:0002087!3.22e-22!119;CL:0000037!5.51e-19!172;CL:0000566!5.51e-19!172;CL:0002032!1.29e-18!165;CL:0000837!1.29e-18!165;CL:0000988!3.76e-18!182;CL:0000115!2.36e-07!35;CL:0002393!2.41e-07!9;CL:0002397!2.41e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.26e-46;39!CL:0000234;8.26e-46;39!CL:0000860;6.86e-45;33!CL:0002057;6.86e-45;33!CL:0000576;1.88e-39;48!CL:0000766;1.67e-32;69!CL:0000763;7.06e-16;100!CL:0000235;5.41e-12;6!CL:0000738;3.72e-10;136!CL:0002087;4.50e-10;104!CL:0002393;1.42e-09;6!CL:0002397;1.42e-09;6!CL:0000148;2.06e-09;10!CL:0000147;5.18e-08;14!CL:0002567;5.48e-07;3!CL:0002619;6.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.14e-77,72;CL:0000557,2.82e-75,67;CL:0000839,6.04e-74,66;CL:0000473,4.15e-72,48;CL:0000234,4.15e-72,48;CL:0002194,4.57e-72,59;CL:0000576,4.57e-72,59;CL:0000040,4.57e-72,59;CL:0000559,4.57e-72,59;CL:0002009,6.41e-72,61;CL:0000860,3.25e-61,42;CL:0002057,3.25e-61,42;CL:0000763,5.94e-51,108;CL:0000049,5.94e-51,108;CL:0000738,8.65e-38,136;CL:0002031,2.83e-37,120;CL:0002087,3.04e-33,115;CL:0002032,2.40e-30,161;CL:0000837,2.40e-30,161;CL:0000037,2.37e-29,168;CL:0000988,6.86e-27,177;CL:0002393,1.76e-13,9;CL:0002397,1.76e-13,9;CL:0000235,5.34e-12,6;CL:0000148,2.06e-09,10;CL:0000541,2.06e-09,10;CL:0000219,3.40e-09,386;CL:0000147,5.62e-08,14;CL:0000134,7.57e-08,354;CL:0002320,2.25e-07,361;CL:0002567,5.45e-07,3;CL:0002619,6.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-44;42!CL:0000049;5.52e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.17e-32!115;UBERON:0002371!4.35e-29!80;UBERON:0002193!2.52e-28!112;UBERON:0002390!1.61e-26!102;UBERON:0003061!1.61e-26!102;UBERON:0001474!8.14e-26!86;UBERON:0004765!7.19e-21!101;UBERON:0001434!7.19e-21!101;UBERON:0003081!1.97e-11!216;UBERON:0002204!9.87e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.68e-64,76;UBERON:0002405,3.01e-59,93;UBERON:0001474,2.59e-58,82;UBERON:0004765,1.43e-51,90;UBERON:0002193,4.29e-50,108;UBERON:0002390,2.09e-49,98;UBERON:0003061,2.09e-49,98;UBERON:0001434,1.15e-44,100;UBERON:0003081,2.17e-22,203;UBERON:0002204,6.28e-22,167;UBERON:0000926,2.97e-09,315;UBERON:0004120,2.97e-09,315;UBERON:0006603,2.97e-09,315;UBERON:0002384,4.04e-07,371 | |||
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| |||
|short_description=p5@TNFRSF14 | |||
}} |
Revision as of 04:49, 12 September 2013
Short description: | p5@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TNFRSF14_5end |
Coexpression cluster: | C806_Melanocyte_CD14_Monocytederived_Macrophage_granulocyte_Mast_Eosinophils |
Association with transcript: | -2bp_to_ENST00000451778_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | F6Q0M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.68e-64 | 76 |
immune system | 3.01e-59 | 93 |
bone element | 2.59e-58 | 82 |
skeletal element | 1.43e-51 | 90 |
hemolymphoid system | 4.29e-50 | 108 |
hematopoietic system | 2.09e-49 | 98 |
blood island | 2.09e-49 | 98 |
skeletal system | 1.15e-44 | 100 |
lateral plate mesoderm | 2.17e-22 | 203 |
musculoskeletal system | 6.28e-22 | 167 |
mesoderm | 2.97e-09 | 315 |
mesoderm-derived structure | 2.97e-09 | 315 |
presumptive mesoderm | 2.97e-09 | 315 |
connective tissue | 4.04e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.