FFCP PHASE1:Hg19::chr1:24646002..24646013,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57822|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25839|TSSclassifier=S|UniProt=A2A297,Q8TE85|association_with_transcript=-42bp_to_ENST00000356046,NM_001195010_5end|description=CAGE_peak_3_at_GRHL3_5end|id=chr1:24646002..24646013,+|ontology_enrichment_celltype=CL:0000066!4.03e-13!254;CL:0002076!4.56e-11!43;CL:0000223!1.22e-08!59;CL:0000622!1.18e-07!5;CL:0002251!1.70e-07!21;CL:0002159!3.71e-07!13|ontology_enrichment_celltype_v019=CL:0000622;1.77e-17;5!CL:0000154;1.60e-14;6!CL:0002623;1.89e-11;3!CL:0000150;1.38e-09;9!CL:0002159;1.48e-08;14!CL:0000575;2.01e-08;2!CL:0001014;4.46e-08;2!CL:0001016;4.46e-08;2!CL:0000317;9.72e-08;2!CL:1000448;9.72e-08;2!CL:0002308;9.72e-08;2!CL:0002140;9.72e-08;2|ontology_enrichment_celltype_v019_2=CL:0000622,2.36e-17,5;CL:0000154,2.02e-14,6;CL:0002623,3.12e-11,3;CL:0000150,1.61e-09,9;CL:0002159,1.44e-08,14;CL:0000575,1.80e-08,2;CL:0001014,6.17e-08,2;CL:0001016,6.17e-08,2;CL:0000317,7.90e-08,2;CL:1000448,7.90e-08,2;CL:0002308,7.90e-08,2;CL:0002140,7.90e-08,2;CL:0000066,2.08e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!2.30e-08!14;DOID:305!3.64e-08!106|ontology_enrichment_disease_v019=DOID:5093;6.15e-09;4!DOID:1612;6.15e-09;4|ontology_enrichment_disease_v019_2=DOID:5093,8.07e-09,4;DOID:1612,8.07e-09,4|ontology_enrichment_uberon=UBERON:0003076!3.83e-10!15;UBERON:0003057!3.83e-10!15;UBERON:0000161!9.34e-10!35;UBERON:0000062!4.52e-09!511;UBERON:0000475!5.28e-09!365;UBERON:0000922!1.50e-08!612;UBERON:0001008!1.54e-08!45;UBERON:0006554!7.76e-08!44;UBERON:0000468!9.98e-08!659;UBERON:0000924!1.24e-07!173;UBERON:0006601!1.24e-07!173;UBERON:0004121!1.36e-07!169;UBERON:0004733!2.53e-07!12;UBERON:0002028!2.53e-07!12;UBERON:0007277!2.53e-07!12;UBERON:0000489!3.24e-07!32;UBERON:0004119!4.48e-07!169;UBERON:0000925!4.48e-07!169;UBERON:0006595!4.48e-07!169;UBERON:0000344!5.22e-07!12;UBERON:0001004!7.03e-07!72;UBERON:0002298!7.41e-07!8|ontology_enrichment_uberon_v019=UBERON:0002419;9.72e-08;2!UBERON:0007771;9.72e-08;2!UBERON:0003297;9.72e-08;2!UBERON:0001821;9.72e-08;2!UBERON:0003487;9.72e-08;2!UBERON:0001820;9.72e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002419,7.90e-08,2;UBERON:0007771,7.90e-08,2;UBERON:0003297,7.90e-08,2;UBERON:0001821,7.90e-08,2;UBERON:0003487,7.90e-08,2;UBERON:0001820,7.90e-08,2;UBERON:0005089,7.90e-08,2;UBERON:0005088,7.90e-08,2|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.984968464614303,0.408001382488506,1.56727360739044,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,2.91436230634034,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0.243947412259191,0.265059536642971,0.116193942869518,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0.171567810298526,2.41450627898976,1.1240175325762,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0.93733833986777,0,0.425325291727159,0.179117045405697,1.16253575405585,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,2.5782676902051,0,0,0,6.31679458070376,1.23224539367064,0.784349769176855,0,0.844413031143006,0,0,0,0,0,0,3.05851527654046,4.15538004464362,0,0,0,0,0,0,0,0.457847324091717,0.990113999047056,1.14853107599234,1.95018073810956,0,0,0.154048617114644,0,0,0,0,0,0,0.991709492165869,0,0.510450849978337,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,0,0,0.43050537267123,0,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0.359473404589307,0.179021174675609,0,0.887790650732402,0,0,0,0.185536196323703,0,1.04171104434093,15.5678799993228,0,0.1137934482855,2.79679015322043,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,11.2933232865669,2.46240827212151,0,1.61394733071642,1.6156375993759,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0.337005664903385,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0,0,0,0.442306057399416,0.150323419414493,0.207376382794494,0,0,0,0,1.99226682220855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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25839 | |||
|TSSclassifier=S | |||
|UniProt=A2A297,Q8TE85 | |||
|association_with_transcript=-42bp_to_ENST00000356046,NM_001195010_5end | |||
|description=CAGE_peak_3_at_GRHL3_5end | |||
|id=chr1:24646002..24646013,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.03e-13!254;CL:0002076!4.56e-11!43;CL:0000223!1.22e-08!59;CL:0000622!1.18e-07!5;CL:0002251!1.70e-07!21;CL:0002159!3.71e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000622;1.77e-17;5!CL:0000154;1.60e-14;6!CL:0002623;1.89e-11;3!CL:0000150;1.38e-09;9!CL:0002159;1.48e-08;14!CL:0000575;2.01e-08;2!CL:0001014;4.46e-08;2!CL:0001016;4.46e-08;2!CL:0000317;9.72e-08;2!CL:1000448;9.72e-08;2!CL:0002308;9.72e-08;2!CL:0002140;9.72e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.36e-17,5;CL:0000154,2.02e-14,6;CL:0002623,3.12e-11,3;CL:0000150,1.61e-09,9;CL:0002159,1.44e-08,14;CL:0000575,1.80e-08,2;CL:0001014,6.17e-08,2;CL:0001016,6.17e-08,2;CL:0000317,7.90e-08,2;CL:1000448,7.90e-08,2;CL:0002308,7.90e-08,2;CL:0002140,7.90e-08,2;CL:0000066,2.08e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.30e-08!14;DOID:305!3.64e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.15e-09;4!DOID:1612;6.15e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.07e-09,4;DOID:1612,8.07e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0003076!3.83e-10!15;UBERON:0003057!3.83e-10!15;UBERON:0000161!9.34e-10!35;UBERON:0000062!4.52e-09!511;UBERON:0000475!5.28e-09!365;UBERON:0000922!1.50e-08!612;UBERON:0001008!1.54e-08!45;UBERON:0006554!7.76e-08!44;UBERON:0000468!9.98e-08!659;UBERON:0000924!1.24e-07!173;UBERON:0006601!1.24e-07!173;UBERON:0004121!1.36e-07!169;UBERON:0004733!2.53e-07!12;UBERON:0002028!2.53e-07!12;UBERON:0007277!2.53e-07!12;UBERON:0000489!3.24e-07!32;UBERON:0004119!4.48e-07!169;UBERON:0000925!4.48e-07!169;UBERON:0006595!4.48e-07!169;UBERON:0000344!5.22e-07!12;UBERON:0001004!7.03e-07!72;UBERON:0002298!7.41e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;9.72e-08;2!UBERON:0007771;9.72e-08;2!UBERON:0003297;9.72e-08;2!UBERON:0001821;9.72e-08;2!UBERON:0003487;9.72e-08;2!UBERON:0001820;9.72e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,7.90e-08,2;UBERON:0007771,7.90e-08,2;UBERON:0003297,7.90e-08,2;UBERON:0001821,7.90e-08,2;UBERON:0003487,7.90e-08,2;UBERON:0001820,7.90e-08,2;UBERON:0005089,7.90e-08,2;UBERON:0005088,7.90e-08,2 | |||
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|short_description=p3@GRHL3 | |||
}} |
Revision as of 04:44, 12 September 2013
Short description: | p3@GRHL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GRHL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000356046, NM_001195010_5end |
EntrezGene: | GRHL3 |
HGNC: | 25839 |
UniProt: | A2A297Q8TE85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.36e-17 | 5 |
protein secreting cell | 2.02e-14 | 6 |
acinar cell of salivary gland | 3.12e-11 | 3 |
glandular epithelial cell | 1.61e-09 | 9 |
general ecto-epithelial cell | 1.44e-08 | 14 |
corneal epithelial cell | 1.80e-08 | 2 |
CD1a-positive Langerhans cell | 6.17e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.17e-08 | 2 |
sebum secreting cell | 7.90e-08 | 2 |
epithelial cell of sweat gland | 7.90e-08 | 2 |
epithelial cell of skin gland | 7.90e-08 | 2 |
acinar cell of sebaceous gland | 7.90e-08 | 2 |
epithelial cell | 2.08e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
skin gland | 7.90e-08 | 2 |
epidermis gland | 7.90e-08 | 2 |
gland of integumental system | 7.90e-08 | 2 |
sebaceous gland | 7.90e-08 | 2 |
skin sebaceous gland | 7.90e-08 | 2 |
sweat gland | 7.90e-08 | 2 |
sweat gland placode | 7.90e-08 | 2 |
sebaceous gland placode | 7.90e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.07e-09 | 4 |
breast cancer | 8.07e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.