FFCP PHASE1:Hg19::chr1:240448546..240448559,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3954|description=CAGE_peak_at_chr1:240448546..240448559,+|id=chr1:240448546..240448559,+|ontology_enrichment_celltype=CL:0002334!7.66e-22!12;CL:0000057!5.42e-20!75;CL:0002620!1.13e-18!23;CL:0002580!4.44e-12!3;CL:0002579!4.38e-11!3;CL:0000136!9.32e-11!15;CL:0000055!1.73e-09!180;CL:0000515!2.58e-08!4;CL:0002617!4.62e-08!2;CL:0002570!3.47e-07!8|ontology_enrichment_celltype_v019=CL:0002580;9.02e-60;3!CL:0002573;9.94e-28;2!CL:0002591;5.16e-21;1!CL:0002616;5.16e-21;1!CL:0002334;1.46e-15;12!CL:0002617;3.34e-11;2!CL:0000136;5.11e-07;13|ontology_enrichment_celltype_v019_2=CL:0002580,1.22e-59,3;CL:0002573,1.06e-27,2;CL:0002616,2.82e-21,1;CL:0002591,7.72e-21,1;CL:0002334,1.57e-15,12;CL:0002617,2.73e-11,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!1.04e-10!5;DOID:450!1.04e-10!5;DOID:66!1.04e-10!5;DOID:423!1.04e-10!5;DOID:0080000!1.04e-10!5;DOID:11722!1.04e-10!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!2.09e-14!6;UBERON:0002358!2.09e-14!6;UBERON:0003684!2.09e-14!6;UBERON:0001178!2.09e-14!6;UBERON:0004457!2.12e-13!12;UBERON:0000042!2.12e-13!12;UBERON:0002199!1.80e-11!45;UBERON:0002416!1.80e-11!45;UBERON:0002097!2.07e-11!40;UBERON:0000310!5.15e-09!10;UBERON:0001443!3.70e-08!11|ontology_enrichment_uberon_v019=UBERON:0000310;5.71e-32;10!UBERON:0001443;4.08e-29;11!UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0005406;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0000010;6.34e-10;8|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.49e-32,10;UBERON:0001443,3.93e-29,11;UBERON:0005406,2.47e-11,2;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0000010,6.48e-10,8;UBERON:0009722,4.18e-08,11;UBERON:0007690,4.18e-08,11;UBERON:0004145,7.76e-08,3|phase1_expression=1.63510541343501,0.214100523890983,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,1.18143432568886,0.389748020644795,0,0.368199594569197,0,0,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,3.6830873589135,1.12264037773229,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19496401972526,2.38597533325642,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:240448546..240448559,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3954 | |||
|description=CAGE_peak_at_chr1:240448546..240448559,+ | |||
|id=chr1:240448546..240448559,+ | |||
|ontology_enrichment_celltype=CL:0002334!7.66e-22!12;CL:0000057!5.42e-20!75;CL:0002620!1.13e-18!23;CL:0002580!4.44e-12!3;CL:0002579!4.38e-11!3;CL:0000136!9.32e-11!15;CL:0000055!1.73e-09!180;CL:0000515!2.58e-08!4;CL:0002617!4.62e-08!2;CL:0002570!3.47e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002580;9.02e-60;3!CL:0002573;9.94e-28;2!CL:0002591;5.16e-21;1!CL:0002616;5.16e-21;1!CL:0002334;1.46e-15;12!CL:0002617;3.34e-11;2!CL:0000136;5.11e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.22e-59,3;CL:0002573,1.06e-27,2;CL:0002616,2.82e-21,1;CL:0002591,7.72e-21,1;CL:0002334,1.57e-15,12;CL:0002617,2.73e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.04e-10!5;DOID:450!1.04e-10!5;DOID:66!1.04e-10!5;DOID:423!1.04e-10!5;DOID:0080000!1.04e-10!5;DOID:11722!1.04e-10!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.09e-14!6;UBERON:0002358!2.09e-14!6;UBERON:0003684!2.09e-14!6;UBERON:0001178!2.09e-14!6;UBERON:0004457!2.12e-13!12;UBERON:0000042!2.12e-13!12;UBERON:0002199!1.80e-11!45;UBERON:0002416!1.80e-11!45;UBERON:0002097!2.07e-11!40;UBERON:0000310!5.15e-09!10;UBERON:0001443!3.70e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;5.71e-32;10!UBERON:0001443;4.08e-29;11!UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0005406;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0000010;6.34e-10;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.49e-32,10;UBERON:0001443,3.93e-29,11;UBERON:0005406,2.47e-11,2;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0000010,6.48e-10,8;UBERON:0009722,4.18e-08,11;UBERON:0007690,4.18e-08,11;UBERON:0004145,7.76e-08,3 | |||
|phase1_expression=1.63510541343501,0.214100523890983,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,1.18143432568886,0.389748020644795,0,0.368199594569197,0,0,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,3.6830873589135,1.12264037773229,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19496401972526,2.38597533325642,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:240448546..240448559,+ | |||
}} |
Revision as of 04:31, 12 September 2013
Short description: | p@chr1:240448546..240448559, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:240448546..240448559, + |
Coexpression cluster: | C3954_Preadipocyte_schwannoma_Adipocyte_Ewing_Fibroblast_Myoblast_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.22e-59 | 3 |
Schwann cell | 1.06e-27 | 2 |
perirenal adipocyte cell | 2.82e-21 | 1 |
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
preadipocyte | 1.57e-15 | 12 |
adipocyte of breast | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
breast | 5.49e-32 | 10 |
chest | 3.93e-29 | 11 |
perirenal fat | 2.47e-11 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
peripheral nervous system | 6.48e-10 | 8 |
entire pharyngeal arch endoderm | 4.18e-08 | 11 |
early pharyngeal endoderm | 4.18e-08 | 11 |
outflow tract | 7.76e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.