FFCP PHASE1:Hg19::chr1:236849791..236849806,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=88 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=164 | |||
|TSSclassifier=S | |||
|UniProt=P35609 | |||
|association_with_transcript=-1bp_to_ENST00000366578_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_ACTN2_5end | |||
|id=chr1:236849791..236849806,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.04e-10!42;CL:0000860!1.74e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.64e-13;33!CL:0002057;7.64e-13;33!CL:0000473;5.71e-08;39!CL:0000234;5.71e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.42e-09,42;CL:0002057,5.42e-09,42;CL:0000473,8.15e-07,48;CL:0000234,8.15e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.00e-11;82!CL:0002057;4.05e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@ACTN2 | |||
}} |
Revision as of 04:26, 12 September 2013
Short description: | p1@ACTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ACTN2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -1bp_to_ENST00000366578_5end |
EntrezGene: | ACTN2 |
HGNC: | 164 |
UniProt: | P35609 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.42e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.42e-09 | 42 |
defensive cell | 8.15e-07 | 48 |
phagocyte | 8.15e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.