FFCP PHASE1:Hg19::chr1:233749836..233749859,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3775|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6272|TSSclassifier=S|UniProt=O00180|association_with_transcript=86bp_to_ENST00000366621,NM_002245,uc010pxo.1_5end|description=CAGE_peak_5_at_KCNK1_5end|id=chr1:233749836..233749859,+|ontology_enrichment_celltype=CL:0000066!2.54e-12!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,1.99e-12,253|ontology_enrichment_development_v019=UBERON:0008947;1.86e-07;29|ontology_enrichment_disease=DOID:305!3.59e-15!106;DOID:0050687!1.22e-08!143|ontology_enrichment_disease_v019=DOID:299;3.03e-08;25|ontology_enrichment_disease_v019_2=DOID:305,2.66e-17,106;DOID:0050687,3.95e-11,143;DOID:299,1.10e-08,25|ontology_enrichment_uberon=UBERON:0007023!3.04e-16!115;UBERON:0000064!5.77e-14!219;UBERON:0001049!4.44e-13!57;UBERON:0005068!4.44e-13!57;UBERON:0006241!4.44e-13!57;UBERON:0007135!4.44e-13!57;UBERON:0004119!3.07e-11!169;UBERON:0000925!3.07e-11!169;UBERON:0006595!3.07e-11!169;UBERON:0000481!1.74e-10!347;UBERON:0001004!2.23e-10!72;UBERON:0002616!4.63e-10!59;UBERON:0000062!8.85e-10!511;UBERON:0008947!1.02e-09!38;UBERON:0003258!1.02e-09!38;UBERON:0000065!1.18e-09!53;UBERON:0002780!2.12e-09!41;UBERON:0001890!2.12e-09!41;UBERON:0006240!2.12e-09!41;UBERON:0005156!6.18e-09!59;UBERON:0000990!6.18e-09!59;UBERON:0003075!6.66e-09!86;UBERON:0007284!6.66e-09!86;UBERON:0003080!7.42e-09!42;UBERON:0000033!8.74e-09!123;UBERON:0001007!1.38e-08!155;UBERON:0001555!1.38e-08!155;UBERON:0007026!1.38e-08!155;UBERON:0001017!1.55e-08!82;UBERON:0000955!2.13e-08!69;UBERON:0006238!2.13e-08!69;UBERON:0005743!2.34e-08!86;UBERON:0000153!3.39e-08!129;UBERON:0007811!3.39e-08!129;UBERON:0003133!3.65e-08!48;UBERON:0002346!3.76e-08!90;UBERON:0000072!7.27e-08!46;UBERON:0001737!1.03e-07!9;UBERON:0003100!1.54e-07!41;UBERON:0000077!1.97e-07!130;UBERON:0001893!2.32e-07!34;UBERON:0000477!3.09e-07!286;UBERON:0004175!3.81e-07!25;UBERON:0000475!4.90e-07!365;UBERON:0004121!5.03e-07!169;UBERON:0002020!5.04e-07!34;UBERON:0003528!5.04e-07!34;UBERON:0002791!7.61e-07!33;UBERON:0004921!8.04e-07!129;UBERON:0004185!8.04e-07!129;UBERON:0003134!8.47e-07!37;UBERON:0000474!8.47e-07!37|ontology_enrichment_uberon_v019=UBERON:0001737;3.72e-12;9!UBERON:0001557;3.72e-12;9!UBERON:0000073;7.98e-09;53!UBERON:0002616;7.98e-09;53!UBERON:0004733;3.19e-07;12!UBERON:0002028;3.19e-07;12!UBERON:0000065;6.20e-07;44!UBERON:0002298;6.80e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.50e-15,56;UBERON:0005068,8.50e-15,56;UBERON:0006241,8.50e-15,56;UBERON:0007135,8.50e-15,56;UBERON:0000073,5.21e-14,53;UBERON:0002616,5.21e-14,53;UBERON:0001737,4.91e-12,9;UBERON:0007023,2.24e-11,114;UBERON:0000955,1.85e-10,68;UBERON:0006238,1.85e-10,68;UBERON:0001017,2.15e-09,81;UBERON:0002780,4.30e-09,41;UBERON:0001890,4.30e-09,41;UBERON:0003080,4.30e-09,41;UBERON:0006240,4.30e-09,41;UBERON:0011216,6.27e-09,223;UBERON:0003075,8.14e-09,82;UBERON:0007284,8.14e-09,82;UBERON:0002346,1.75e-08,86;UBERON:0010371,3.47e-08,104;UBERON:0003076,1.63e-07,15;UBERON:0003057,1.63e-07,15;UBERON:0001016,1.71e-07,89;UBERON:0005631,3.97e-07,14;UBERON:0000158,3.97e-07,14;UBERON:0004733,7.68e-07,12;UBERON:0002028,7.68e-07,12;UBERON:0007277,7.68e-07,12|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0.982935746006035,1.39560233594486,1.31064823278103,0.791300934685361,0.990130823680373,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,1.29902789771517,1.64201178899891,1.18066171970519,0,0,0.154816123316076,0,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.512365278902701,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.44575660953827,0.50133791063589,1.59331170856906,0.795285947051099,4.86634870302636,0.283604451492204,0,0.263504357079378,0.916853528483988,1.09288586487763,0.370784442784429,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450445921933289,0,0,0.549605231791222,0,0,0.872188104285069,0,0,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0.61417158655884,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0,0.68205903612839,0,0,0,0.355009592516614,0,0.339121184620975,0.966304265816484,0.818238361772504,1.14721838155602,1.70763188581434,0.927708378250397,1.2781333715647,1.14027160516907,1.7662459561294,1.09493207722749,0,0,0,0.928735856063958,0,4.49565840151407,4.21461725195254,6.26628677697053,3.74999507290139,5.44698610231015,5.69449485866632,4.04493924480493,2.1584361163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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3775 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6272 | |||
|TSSclassifier=S | |||
|UniProt=O00180 | |||
|association_with_transcript=86bp_to_ENST00000366621,NM_002245,uc010pxo.1_5end | |||
|description=CAGE_peak_5_at_KCNK1_5end | |||
|id=chr1:233749836..233749859,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.54e-12!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.99e-12,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.86e-07;29 | |||
|ontology_enrichment_disease=DOID:305!3.59e-15!106;DOID:0050687!1.22e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:299;3.03e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.66e-17,106;DOID:0050687,3.95e-11,143;DOID:299,1.10e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.04e-16!115;UBERON:0000064!5.77e-14!219;UBERON:0001049!4.44e-13!57;UBERON:0005068!4.44e-13!57;UBERON:0006241!4.44e-13!57;UBERON:0007135!4.44e-13!57;UBERON:0004119!3.07e-11!169;UBERON:0000925!3.07e-11!169;UBERON:0006595!3.07e-11!169;UBERON:0000481!1.74e-10!347;UBERON:0001004!2.23e-10!72;UBERON:0002616!4.63e-10!59;UBERON:0000062!8.85e-10!511;UBERON:0008947!1.02e-09!38;UBERON:0003258!1.02e-09!38;UBERON:0000065!1.18e-09!53;UBERON:0002780!2.12e-09!41;UBERON:0001890!2.12e-09!41;UBERON:0006240!2.12e-09!41;UBERON:0005156!6.18e-09!59;UBERON:0000990!6.18e-09!59;UBERON:0003075!6.66e-09!86;UBERON:0007284!6.66e-09!86;UBERON:0003080!7.42e-09!42;UBERON:0000033!8.74e-09!123;UBERON:0001007!1.38e-08!155;UBERON:0001555!1.38e-08!155;UBERON:0007026!1.38e-08!155;UBERON:0001017!1.55e-08!82;UBERON:0000955!2.13e-08!69;UBERON:0006238!2.13e-08!69;UBERON:0005743!2.34e-08!86;UBERON:0000153!3.39e-08!129;UBERON:0007811!3.39e-08!129;UBERON:0003133!3.65e-08!48;UBERON:0002346!3.76e-08!90;UBERON:0000072!7.27e-08!46;UBERON:0001737!1.03e-07!9;UBERON:0003100!1.54e-07!41;UBERON:0000077!1.97e-07!130;UBERON:0001893!2.32e-07!34;UBERON:0000477!3.09e-07!286;UBERON:0004175!3.81e-07!25;UBERON:0000475!4.90e-07!365;UBERON:0004121!5.03e-07!169;UBERON:0002020!5.04e-07!34;UBERON:0003528!5.04e-07!34;UBERON:0002791!7.61e-07!33;UBERON:0004921!8.04e-07!129;UBERON:0004185!8.04e-07!129;UBERON:0003134!8.47e-07!37;UBERON:0000474!8.47e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.72e-12;9!UBERON:0001557;3.72e-12;9!UBERON:0000073;7.98e-09;53!UBERON:0002616;7.98e-09;53!UBERON:0004733;3.19e-07;12!UBERON:0002028;3.19e-07;12!UBERON:0000065;6.20e-07;44!UBERON:0002298;6.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.50e-15,56;UBERON:0005068,8.50e-15,56;UBERON:0006241,8.50e-15,56;UBERON:0007135,8.50e-15,56;UBERON:0000073,5.21e-14,53;UBERON:0002616,5.21e-14,53;UBERON:0001737,4.91e-12,9;UBERON:0007023,2.24e-11,114;UBERON:0000955,1.85e-10,68;UBERON:0006238,1.85e-10,68;UBERON:0001017,2.15e-09,81;UBERON:0002780,4.30e-09,41;UBERON:0001890,4.30e-09,41;UBERON:0003080,4.30e-09,41;UBERON:0006240,4.30e-09,41;UBERON:0011216,6.27e-09,223;UBERON:0003075,8.14e-09,82;UBERON:0007284,8.14e-09,82;UBERON:0002346,1.75e-08,86;UBERON:0010371,3.47e-08,104;UBERON:0003076,1.63e-07,15;UBERON:0003057,1.63e-07,15;UBERON:0001016,1.71e-07,89;UBERON:0005631,3.97e-07,14;UBERON:0000158,3.97e-07,14;UBERON:0004733,7.68e-07,12;UBERON:0002028,7.68e-07,12;UBERON:0007277,7.68e-07,12 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0.982935746006035,1.39560233594486,1.31064823278103,0.791300934685361,0.990130823680373,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,1.29902789771517,1.64201178899891,1.18066171970519,0,0,0.154816123316076,0,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.512365278902701,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.44575660953827,0.50133791063589,1.59331170856906,0.795285947051099,4.86634870302636,0.283604451492204,0,0.263504357079378,0.916853528483988,1.09288586487763,0.370784442784429,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450445921933289,0,0,0.549605231791222,0,0,0.872188104285069,0,0,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0.61417158655884,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0,0.68205903612839,0,0,0,0.355009592516614,0,0.339121184620975,0.966304265816484,0.818238361772504,1.14721838155602,1.70763188581434,0.927708378250397,1.2781333715647,1.14027160516907,1.7662459561294,1.09493207722749,0,0,0,0.928735856063958,0,4.49565840151407,4.21461725195254,6.26628677697053,3.74999507290139,5.44698610231015,5.69449485866632,4.04493924480493,2.15843611637881,2.30848294167834,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,2.81481122752566,1.11106134190236,0,0,0,0.115930404975077,0.117408694235822,0,0,0,2.37061319387782,1.71697232418975,0,0,0,1.87467667973554,0.503946384596579,0.708875486211932,1.61205340865127,2.03443756959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0.301439377059586,0.871533458600294,1.59956785891291,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,1.2269149171914,0,1.08506009479894,0.415941723061614,0,0.157702415033935,0.35142424497814,0.902838299183157,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,3.63753085735511,1.66435439510497,2.41912234663744,0.744323423456331,0.460385919864187,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,0,0,0.519254429183621,0,0,0.601519410909855,4.41988746892302,0.229628896329213,0.546273504020151,0.655622074797121,0.451199612907412,2.31046011313244,0,0,1.58327443339314,0,0,0,0,0.541892875087706,0,1.52925763827023,2.49322802678617,0.447749509444357,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0.515205058238611,0,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0.770243085573222,0.15350367472613,0,0.751941714077915,0.580066775656914,0.426133137080504,0,1.65284915360978,1.53752053892085,1.27612712494584,1.31505115112215,0,0.62962469366128,2.0911118104818,0.308033580176089,0,0.869932992075073,0.55597265731176,0,0,0,0,0.767693373934002,0,1.27281299170375,0,0.179872457583315,0,0.471249609382746,0,0,0,0.48763373908959,0.487426979262569,0,0.409499734223957,0,0,0.551365343546124,0,0,0.578775534266688,1.31178950409327,0,0,0,0.573645408816206,0.392996164052485,0,1.06428319221179,0.844430541190656,0.329294892959902,0,0,0.673554789078584,1.34060455107157,0,0.470719003883896,1.29151611801369,0,1.7737206141467,4.82419140434615,0,0,0,0,0,0,0,0,0,2.88743956579008,2.45040215981032,0,0,0.0711418433484141,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,3.69262196843137,1.35227839237992,0,4.22961015263549,2.99424864653152,0.146508179271894,0,0,0.568272293612826,6.20735660317994,3.26661148915902,4.30024982938925,0,0.422008249231538,0.556543525114529,0.16480387422676,0,0.398495976502139,0,0.251932747854276,0,0.984678443688556,0,0.718946809178615,3.9384658428634,0,0.789147245095469,0,0,6.78532922266653,3.06134723934109,0,1.82299432759663,2.53633999988968,0,1.365521379426,0,6.61885508950222,0,0,0,1.77148277162768,0.723578631752448,7.62908681585416,2.32216445855572,9.16197618755997,3.07139556015562,1.52513848926586,0.278847488557207,0.923403102045565,0.455768223388005,0.69169171316418,1.70539524378567,0.325942115766024,3.50901275705111,3.02272058226146,1.06606955203727,0,0,0,0.676786981851542,0.588187602953219,0.671286347903371,0.75901493089674,0,0.843992258112108,0.489698424477443,0,0,0.995261931078505,1.32686346755009,1.83309043480088,0.296521128680622,0.247127877893006,0.417687798021821,2.22423738836234,0,1.63985112007737,0,1.17398771359254,0,2.36750641709634,0,0,0.442306057399416,0.150323419414493,0.518440956986236,0,0,0,0,0,0.1386746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| |||
|short_description=p5@KCNK1 | |||
}} |
Revision as of 04:15, 12 September 2013
Short description: | p5@KCNK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KCNK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_ENST00000366621, NM_002245, uc010pxo.1_5end |
EntrezGene: | KCNK1 |
HGNC: | 6272 |
UniProt: | O00180 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.99e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
neural tube | 8.50e-15 | 56 |
neural rod | 8.50e-15 | 56 |
future spinal cord | 8.50e-15 | 56 |
neural keel | 8.50e-15 | 56 |
regional part of nervous system | 5.21e-14 | 53 |
regional part of brain | 5.21e-14 | 53 |
larynx | 4.91e-12 | 9 |
adult organism | 2.24e-11 | 114 |
brain | 1.85e-10 | 68 |
future brain | 1.85e-10 | 68 |
central nervous system | 2.15e-09 | 81 |
regional part of forebrain | 4.30e-09 | 41 |
forebrain | 4.30e-09 | 41 |
anterior neural tube | 4.30e-09 | 41 |
future forebrain | 4.30e-09 | 41 |
organ system subdivision | 6.27e-09 | 223 |
neural plate | 8.14e-09 | 82 |
presumptive neural plate | 8.14e-09 | 82 |
neurectoderm | 1.75e-08 | 86 |
ecto-epithelium | 3.47e-08 | 104 |
posterior neural tube | 1.63e-07 | 15 |
chordal neural plate | 1.63e-07 | 15 |
nervous system | 1.71e-07 | 89 |
extraembryonic membrane | 3.97e-07 | 14 |
membranous layer | 3.97e-07 | 14 |
segmental subdivision of hindbrain | 7.68e-07 | 12 |
hindbrain | 7.68e-07 | 12 |
presumptive hindbrain | 7.68e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.66e-17 | 106 |
cell type cancer | 3.95e-11 | 143 |
adenocarcinoma | 1.10e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.