FFCP PHASE1:Hg19::chr1:227505289..227505304,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8476|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1737|TSSclassifier=S|UniProt=Q5VT25|association_with_transcript=110bp_to_ENST00000366765_5end|description=CAGE_peak_20_at_CDC42BPA_5end|id=chr1:227505289..227505304,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000322;8.38e-07;3!CL:0002579;8.38e-07;3|ontology_enrichment_celltype_v019_2=CL:0000322,6.88e-07,3|ontology_enrichment_development_v019=UBERON:0004161;6.16e-07;11|ontology_enrichment_disease=DOID:0050687!5.26e-11!143;DOID:305!6.42e-08!106;DOID:14566!2.96e-07!239;DOID:162!3.74e-07!235|ontology_enrichment_disease_v019=DOID:154;1.38e-09;2!DOID:4236;1.38e-09;2!DOID:3910;1.38e-09;2|ontology_enrichment_disease_v019_2=DOID:3910,1.03e-09,2;DOID:154,1.22e-09,2;DOID:4236,1.22e-09,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001282;8.01e-18;1!UBERON:0009842;8.01e-18;1!UBERON:0003704;8.01e-18;1!UBERON:0001171;8.01e-18;1!UBERON:0001172;8.01e-18;1!UBERON:0002021;3.59e-14;5!UBERON:0004903;1.38e-09;2!UBERON:0002702;1.38e-09;2!UBERON:0002173;1.38e-09;2!UBERON:0002186;1.38e-09;2!UBERON:0001950;1.10e-07;20!UBERON:0000058;1.52e-07;10!UBERON:0002619;4.63e-07;22!UBERON:0001870;8.38e-07;3!UBERON:0004821;8.38e-07;3!UBERON:0007499;8.38e-07;3!UBERON:0003215;8.38e-07;3!UBERON:0010368;8.38e-07;3!UBERON:0009911;8.38e-07;3!UBERON:0002299;8.38e-07;3!UBERON:0001280;8.38e-07;3!UBERON:0004647;8.38e-07;3!UBERON:0006524;8.38e-07;3!UBERON:0008874;8.38e-07;3!UBERON:0002169;8.38e-07;3!UBERON:0004894;8.38e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.37e-18,1;UBERON:0009842,7.37e-18,1;UBERON:0003704,7.37e-18,1;UBERON:0001171,7.37e-18,1;UBERON:0001172,7.37e-18,1;UBERON:0002021,3.37e-14,5;UBERON:0002702,9.46e-10,2;UBERON:0004903,1.03e-09,2;UBERON:0002173,1.03e-09,2;UBERON:0002186,1.03e-09,2;UBERON:0001950,9.73e-08,20;UBERON:0002619,4.13e-07,22;UBERON:0001870,6.50e-07,3;UBERON:0004821,6.88e-07,3;UBERON:0003215,6.88e-07,3;UBERON:0010368,6.88e-07,3;UBERON:0009911,6.88e-07,3;UBERON:0002299,6.88e-07,3;UBERON:0006524,6.88e-07,3;UBERON:0008874,6.88e-07,3;UBERON:0002169,6.88e-07,3;UBERON:0004894,6.88e-07,3;UBERON:0001280,8.15e-07,3;UBERON:0004647,8.15e-07,3;UBERON:0005171,8.15e-07,3|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,2.3858578411533,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.825354125820202,0.208994966536811,0,1.06729878806013,0,0,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0.311211035399766,0.67355336034844,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0.604512589365842,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.985143749731331,0.871901815541886,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,0.1466765716419,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0,0.184161977871793,0.459257792658427,0,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0.48335359146061,0,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.661139661443912,0.384380134730212,0,0.2023155617111,0,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0.316379424718726,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.9554993798559,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.294747123039363,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0.699869440489966,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,1.42068073403207,0,0,0,0,0.422008249231538,0.111308705022906,0,0.211125408127993,0.19924798825107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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1737 | |||
|TSSclassifier=S | |||
|UniProt=Q5VT25 | |||
|association_with_transcript=110bp_to_ENST00000366765_5end | |||
|description=CAGE_peak_20_at_CDC42BPA_5end | |||
|id=chr1:227505289..227505304,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;8.38e-07;3!CL:0002579;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.16e-07;11 | |||
|ontology_enrichment_disease=DOID:0050687!5.26e-11!143;DOID:305!6.42e-08!106;DOID:14566!2.96e-07!239;DOID:162!3.74e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:154;1.38e-09;2!DOID:4236;1.38e-09;2!DOID:3910;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.03e-09,2;DOID:154,1.22e-09,2;DOID:4236,1.22e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;8.01e-18;1!UBERON:0009842;8.01e-18;1!UBERON:0003704;8.01e-18;1!UBERON:0001171;8.01e-18;1!UBERON:0001172;8.01e-18;1!UBERON:0002021;3.59e-14;5!UBERON:0004903;1.38e-09;2!UBERON:0002702;1.38e-09;2!UBERON:0002173;1.38e-09;2!UBERON:0002186;1.38e-09;2!UBERON:0001950;1.10e-07;20!UBERON:0000058;1.52e-07;10!UBERON:0002619;4.63e-07;22!UBERON:0001870;8.38e-07;3!UBERON:0004821;8.38e-07;3!UBERON:0007499;8.38e-07;3!UBERON:0003215;8.38e-07;3!UBERON:0010368;8.38e-07;3!UBERON:0009911;8.38e-07;3!UBERON:0002299;8.38e-07;3!UBERON:0001280;8.38e-07;3!UBERON:0004647;8.38e-07;3!UBERON:0006524;8.38e-07;3!UBERON:0008874;8.38e-07;3!UBERON:0002169;8.38e-07;3!UBERON:0004894;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.37e-18,1;UBERON:0009842,7.37e-18,1;UBERON:0003704,7.37e-18,1;UBERON:0001171,7.37e-18,1;UBERON:0001172,7.37e-18,1;UBERON:0002021,3.37e-14,5;UBERON:0002702,9.46e-10,2;UBERON:0004903,1.03e-09,2;UBERON:0002173,1.03e-09,2;UBERON:0002186,1.03e-09,2;UBERON:0001950,9.73e-08,20;UBERON:0002619,4.13e-07,22;UBERON:0001870,6.50e-07,3;UBERON:0004821,6.88e-07,3;UBERON:0003215,6.88e-07,3;UBERON:0010368,6.88e-07,3;UBERON:0009911,6.88e-07,3;UBERON:0002299,6.88e-07,3;UBERON:0006524,6.88e-07,3;UBERON:0008874,6.88e-07,3;UBERON:0002169,6.88e-07,3;UBERON:0004894,6.88e-07,3;UBERON:0001280,8.15e-07,3;UBERON:0004647,8.15e-07,3;UBERON:0005171,8.15e-07,3 | |||
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| |||
|short_description=p20@CDC42BPA | |||
}} |
Revision as of 04:00, 12 September 2013
Short description: | p20@CDC42BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_CDC42BPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_ENST00000366765_5end |
EntrezGene: | CDC42BPA |
HGNC: | 1737 |
UniProt: | Q5VT25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.37e-18 | 1 |
acinus | 7.37e-18 | 1 |
intrahepatic bile duct | 7.37e-18 | 1 |
portal lobule | 7.37e-18 | 1 |
hepatic acinus | 7.37e-18 | 1 |
occipital lobe | 3.37e-14 | 5 |
middle frontal gyrus | 9.46e-10 | 2 |
bronchoalveolar duct junction | 1.03e-09 | 2 |
alveolar duct | 1.03e-09 | 2 |
bronchiole | 1.03e-09 | 2 |
neocortex | 9.73e-08 | 20 |
regional part of cerebral cortex | 4.13e-07 | 22 |
frontal cortex | 6.50e-07 | 3 |
pulmonary alveolus epithelium | 6.88e-07 | 3 |
alveolus | 6.88e-07 | 3 |
pulmonary lobule | 6.88e-07 | 3 |
lobule | 6.88e-07 | 3 |
alveolus of lung | 6.88e-07 | 3 |
alveolar system | 6.88e-07 | 3 |
pulmonary acinus | 6.88e-07 | 3 |
alveolar sac | 6.88e-07 | 3 |
alveolar wall | 6.88e-07 | 3 |
liver parenchyma | 8.15e-07 | 3 |
liver lobule | 8.15e-07 | 3 |
hepatic duct | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.03e-09 | 2 |
mixed cell type cancer | 1.22e-09 | 2 |
carcinosarcoma | 1.22e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.