FFCP PHASE1:Hg19::chr1:227327399..227327429,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8476|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=1737|TSSclassifier=S|UniProt=Q9NYF6|association_with_transcript=-67bp_to_AF250871_5end|description=CAGE_peak_6_at_CDC42BPA_5end|id=chr1:227327399..227327429,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!5.47e-10!143;DOID:14566!2.31e-09!239;DOID:162!5.04e-09!235;DOID:305!4.19e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.31e-10!57;UBERON:0005068!5.31e-10!57;UBERON:0006241!5.31e-10!57;UBERON:0007135!5.31e-10!57;UBERON:0000955!2.38e-09!69;UBERON:0006238!2.38e-09!69;UBERON:0000073!3.33e-09!94;UBERON:0001016!3.33e-09!94;UBERON:0001017!5.80e-09!82;UBERON:0002616!1.15e-08!59;UBERON:0005743!1.73e-08!86;UBERON:0003080!2.39e-08!42;UBERON:0002780!3.31e-08!41;UBERON:0001890!3.31e-08!41;UBERON:0006240!3.31e-08!41;UBERON:0000468!1.81e-07!659;UBERON:0002346!3.43e-07!90;UBERON:0002020!5.02e-07!34;UBERON:0003528!5.02e-07!34|ontology_enrichment_uberon_v019=UBERON:0003528;2.52e-07;34!UBERON:0002020;2.52e-07;34!UBERON:0002791;9.38e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.23e-11,56;UBERON:0005068,5.23e-11,56;UBERON:0006241,5.23e-11,56;UBERON:0007135,5.23e-11,56;UBERON:0000073,3.16e-10,53;UBERON:0002616,3.16e-10,53;UBERON:0000955,2.95e-09,68;UBERON:0006238,2.95e-09,68;UBERON:0002346,7.08e-09,86;UBERON:0001016,9.59e-09,89;UBERON:0001017,9.72e-09,81;UBERON:0003528,1.28e-08,34;UBERON:0002020,1.28e-08,34;UBERON:0003075,2.42e-08,82;UBERON:0007284,2.42e-08,82;UBERON:0002780,3.05e-08,41;UBERON:0001890,3.05e-08,41;UBERON:0003080,3.05e-08,41;UBERON:0006240,3.05e-08,41;UBERON:0002791,9.16e-08,32;UBERON:0010371,2.35e-07,104;UBERON:0001893,5.06e-07,34;UBERON:0001869,9.82e-07,32|phase1_expression=0.363356758541113,1.71280419112787,0.281908808191942,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0.263766978228454,0.495065411840187,0.331397375727916,0,1.80808358407193,0,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,2.1686349143074,0,1.15877215168659,0,0.486634870302636,0.472674085820339,0.665188192387692,1.49319135678314,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.838998872419812,2.20094433552054,0,0,1.06729878806013,1.33888245105868,0,0.760272105718513,1.95249646038536,0.735326160691737,2.43042584364528,0.714397826272638,0.673588117878509,0.563057402416611,0,0,0.366403487860815,0,0,0,0.993943903390637,0.506522046658319,0.397227542439656,1.43418310374407,1.41867352879343,0,0,0.49333509683432,0.622422070799533,0.67355336034844,0.326923806226917,0,1.15235184896,0.234321431833797,0.624320153660641,0,1.19558944441441,0.117434498643765,0.323745888736263,0.280901613404497,0.408308342509787,0.982674538494144,0.206651562351531,0,2.47266929278557,0,0,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,2.33206526395521,0.640672166455702,1.48352330811693,0.600182192168805,0.618315175430633,1.03056216018252,1.11670113798954,0.843881661206331,0.389748020644795,1.51460264546469,0.368199594569197,1.13152239773168,0.710019185033229,0.705264687593482,0.339121184620975,0.193260853163297,0,0,1.09776335516636,0.397589304964456,0.69716365721711,0.932949495138334,0.252320850875628,0,0,3.21620469096443,0,1.85747171212792,0,0.354920400119532,0.337169380156203,1.92808823906786,1.32352767278873,1.08939722046203,0.71181185733329,1.34831308160164,0.784885860501384,1.92373578473195,0.738155454624648,0,0,0,1.26755034821831,2.94848165003288,4.13552934676983,0,0.614942192715568,0,0.329250856225877,0,0.502644862058154,0.277765335475589,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0.577465791044295,0.462985512576611,1.52203321787679,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.895585227028483,2.61570544662566,0,0,0.088048434013226,0,0.144119953416961,0,0.253991577168676,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.5867062865676,0.129271715757778,0,0.845302752556,1.59562869950922,0,0,0,0,0.857867961948885,1.08524321078289,0,0,0.355391948742546,0,0.301439377059586,0,1.59956785891291,0,0,2.10833939483032,2.15662369942424,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,2.28767947683888,3.03329280955175,2.68094105557689,1.28855556491985,0,0,0,0,0,0.78195253021274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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1737 | |||
|TSSclassifier=S | |||
|UniProt=Q9NYF6 | |||
|association_with_transcript=-67bp_to_AF250871_5end | |||
|description=CAGE_peak_6_at_CDC42BPA_5end | |||
|id=chr1:227327399..227327429,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.47e-10!143;DOID:14566!2.31e-09!239;DOID:162!5.04e-09!235;DOID:305!4.19e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.31e-10!57;UBERON:0005068!5.31e-10!57;UBERON:0006241!5.31e-10!57;UBERON:0007135!5.31e-10!57;UBERON:0000955!2.38e-09!69;UBERON:0006238!2.38e-09!69;UBERON:0000073!3.33e-09!94;UBERON:0001016!3.33e-09!94;UBERON:0001017!5.80e-09!82;UBERON:0002616!1.15e-08!59;UBERON:0005743!1.73e-08!86;UBERON:0003080!2.39e-08!42;UBERON:0002780!3.31e-08!41;UBERON:0001890!3.31e-08!41;UBERON:0006240!3.31e-08!41;UBERON:0000468!1.81e-07!659;UBERON:0002346!3.43e-07!90;UBERON:0002020!5.02e-07!34;UBERON:0003528!5.02e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.52e-07;34!UBERON:0002020;2.52e-07;34!UBERON:0002791;9.38e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.23e-11,56;UBERON:0005068,5.23e-11,56;UBERON:0006241,5.23e-11,56;UBERON:0007135,5.23e-11,56;UBERON:0000073,3.16e-10,53;UBERON:0002616,3.16e-10,53;UBERON:0000955,2.95e-09,68;UBERON:0006238,2.95e-09,68;UBERON:0002346,7.08e-09,86;UBERON:0001016,9.59e-09,89;UBERON:0001017,9.72e-09,81;UBERON:0003528,1.28e-08,34;UBERON:0002020,1.28e-08,34;UBERON:0003075,2.42e-08,82;UBERON:0007284,2.42e-08,82;UBERON:0002780,3.05e-08,41;UBERON:0001890,3.05e-08,41;UBERON:0003080,3.05e-08,41;UBERON:0006240,3.05e-08,41;UBERON:0002791,9.16e-08,32;UBERON:0010371,2.35e-07,104;UBERON:0001893,5.06e-07,34;UBERON:0001869,9.82e-07,32 | |||
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| |||
|short_description=p6@CDC42BPA | |||
}} |
Revision as of 04:00, 12 September 2013
Short description: | p6@CDC42BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CDC42BPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_AF250871_5end |
EntrezGene: | CDC42BPA |
HGNC: | 1737 |
UniProt: | Q9NYF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.23e-11 | 56 |
neural rod | 5.23e-11 | 56 |
future spinal cord | 5.23e-11 | 56 |
neural keel | 5.23e-11 | 56 |
regional part of nervous system | 3.16e-10 | 53 |
regional part of brain | 3.16e-10 | 53 |
brain | 2.95e-09 | 68 |
future brain | 2.95e-09 | 68 |
neurectoderm | 7.08e-09 | 86 |
nervous system | 9.59e-09 | 89 |
central nervous system | 9.72e-09 | 81 |
brain grey matter | 1.28e-08 | 34 |
gray matter | 1.28e-08 | 34 |
neural plate | 2.42e-08 | 82 |
presumptive neural plate | 2.42e-08 | 82 |
regional part of forebrain | 3.05e-08 | 41 |
forebrain | 3.05e-08 | 41 |
anterior neural tube | 3.05e-08 | 41 |
future forebrain | 3.05e-08 | 41 |
regional part of telencephalon | 9.16e-08 | 32 |
ecto-epithelium | 2.35e-07 | 104 |
telencephalon | 5.06e-07 | 34 |
cerebral hemisphere | 9.82e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.