FFCP PHASE1:Hg19::chr1:214454301..214454314,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56950|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20982|TSSclassifier=W|UniProt=|association_with_transcript=-130bp_to_ENST00000491455_5end|description=CAGE_peak_6_at_SMYD2_5end|id=chr1:214454301..214454314,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!5.90e-12!22;UBERON:0001049!3.90e-11!57;UBERON:0005068!3.90e-11!57;UBERON:0006241!3.90e-11!57;UBERON:0007135!3.90e-11!57;UBERON:0001950!4.25e-11!20;UBERON:0002616!5.66e-11!59;UBERON:0000955!6.04e-11!69;UBERON:0006238!6.04e-11!69;UBERON:0001017!2.65e-10!82;UBERON:0007023!2.89e-10!115;UBERON:0003080!5.24e-10!42;UBERON:0001869!5.47e-10!32;UBERON:0005743!8.61e-10!86;UBERON:0003075!9.02e-10!86;UBERON:0007284!9.02e-10!86;UBERON:0002780!1.29e-09!41;UBERON:0001890!1.29e-09!41;UBERON:0006240!1.29e-09!41;UBERON:0000956!1.35e-09!25;UBERON:0000203!1.35e-09!25;UBERON:0002346!1.41e-09!90;UBERON:0001893!2.28e-09!34;UBERON:0002020!4.57e-09!34;UBERON:0003528!4.57e-09!34;UBERON:0002791!8.98e-09!33;UBERON:0000033!2.41e-08!123;UBERON:0000073!3.84e-08!94;UBERON:0001016!3.84e-08!94;UBERON:0000153!6.05e-08!129;UBERON:0007811!6.05e-08!129;UBERON:0003056!7.98e-08!61|ontology_enrichment_uberon_v019=UBERON:0001950;1.57e-28;20!UBERON:0002619;1.08e-25;22!UBERON:0000956;2.90e-22;25!UBERON:0000203;2.90e-22;25!UBERON:0001869;3.63e-19;32!UBERON:0001893;3.87e-17;34!UBERON:0002791;6.40e-17;32!UBERON:0003528;2.01e-15;34!UBERON:0002020;2.01e-15;34!UBERON:0002021;1.77e-14;5!UBERON:0000200;6.08e-13;6!UBERON:0002780;7.82e-13;41!UBERON:0001890;7.82e-13;41!UBERON:0000073;2.12e-10;53!UBERON:0002616;2.12e-10;53!UBERON:0001870;3.28e-10;3!UBERON:0000955;1.55e-08;68!UBERON:0001017;2.11e-08;75!UBERON:0002702;2.06e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.60e-29,20;UBERON:0002619,6.87e-26,22;UBERON:0000956,1.96e-22,25;UBERON:0000203,1.96e-22,25;UBERON:0001869,5.15e-22,32;UBERON:0001893,1.72e-20,34;UBERON:0002791,3.45e-19,32;UBERON:0000073,1.28e-18,53;UBERON:0002616,1.28e-18,53;UBERON:0001017,1.36e-18,81;UBERON:0002780,2.54e-18,41;UBERON:0001890,2.54e-18,41;UBERON:0003080,2.54e-18,41;UBERON:0006240,2.54e-18,41;UBERON:0000955,5.65e-18,68;UBERON:0006238,5.65e-18,68;UBERON:0003528,7.56e-18,34;UBERON:0002020,7.56e-18,34;UBERON:0001049,2.45e-17,56;UBERON:0005068,2.45e-17,56;UBERON:0006241,2.45e-17,56;UBERON:0007135,2.45e-17,56;UBERON:0001016,4.64e-16,89;UBERON:0003075,2.75e-15,82;UBERON:0007284,2.75e-15,82;UBERON:0007023,4.21e-15,114;UBERON:0002346,2.80e-14,86;UBERON:0002021,3.10e-14,5;UBERON:0003056,1.03e-13,61;UBERON:0000200,6.38e-13,6;UBERON:0004121,3.52e-11,171;UBERON:0000924,3.52e-11,171;UBERON:0006601,3.52e-11,171;UBERON:0010371,9.94e-11,104;UBERON:0010314,1.12e-10,132;UBERON:0001870,3.60e-10,3;UBERON:0002702,1.99e-07,2;UBERON:0000025,4.12e-07,192|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0.491467873003018,0,0.655324116390517,0.527533956456907,0.123766352960047,0,0,1.80808358407193,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.382067028739756,0,0.157421562627358,0,0,0.309632246632152,0,0,0,0.154934401160603,0.426507697462265,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0.422510572623884,0.212604299965044,0.419317291016752,0.44931452458598,0.150176892841506,0,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.579297615531196,2.43806866313962,0,0.383587685530591,0,0,0.434539556882471,0,0.486634870302636,0.283604451492204,0.221729397462564,0.263504357079378,0.589405839739707,0,0,0.649094787309367,0.522389211897802,0.26591592103773,0,0,0,0.198762407366705,0,0.694281003215189,1.13061588384802,0,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0.805658634218294,0,1.70843440283719,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,1.53316637465883,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.25326102332916,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0.98667019366864,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0.468642863667593,0,0,0.149448680551801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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56950 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20982 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-130bp_to_ENST00000491455_5end | |||
|description=CAGE_peak_6_at_SMYD2_5end | |||
|id=chr1:214454301..214454314,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p6@SMYD2 | |||
}} |
Revision as of 03:34, 12 September 2013
Short description: | p6@SMYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SMYD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -130bp_to_ENST00000491455_5end |
EntrezGene: | SMYD2 |
HGNC: | 20982 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.