FFCP PHASE1:Hg19::chr1:21058626..21058705,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=400745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28819|TSSclassifier=S|UniProt=Q6ZV89|association_with_transcript=65bp_to_ENST00000447746_5end|description=CAGE_peak_1_at_SH2D5_5end|id=chr1:21058626..21058705,-|ontology_enrichment_celltype=CL:0000066!7.66e-19!254;CL:0002321!1.02e-14!248;CL:0000220!4.33e-14!246;CL:0002076!2.72e-09!43;CL:0000223!1.50e-07!59;CL:0002159!2.79e-07!13;CL:0000221!3.05e-07!71;CL:0002368!3.73e-07!13;CL:0000076!4.62e-07!62|ontology_enrichment_celltype_v019=CL:0002159;3.73e-10;14!CL:0002076;4.33e-09;42!CL:0002368;2.83e-08;13!CL:1000507;6.40e-08;10!CL:1000494;6.40e-08;10!CL:0000240;8.21e-07;6!CL:0000311;8.21e-07;6!CL:0000079;8.21e-07;6!CL:0000237;8.21e-07;6|ontology_enrichment_celltype_v019_2=CL:0000066,1.20e-14,253;CL:0002076,4.68e-11,42;CL:0002159,6.25e-10,14;CL:0002321,1.78e-08,250;CL:0002368,2.47e-08,13;CL:1000507,6.93e-08,10;CL:1000494,6.93e-08,10;CL:0000223,1.42e-07,58;CL:0000076,6.22e-07,63|ontology_enrichment_development_v019=CL:0000357;8.21e-07;6!CL:0000114;8.21e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!3.70e-20!365;UBERON:0000119!7.21e-18!312;UBERON:0000483!1.09e-17!309;UBERON:0000064!1.08e-16!219;UBERON:0004121!4.55e-16!169;UBERON:0000924!1.63e-15!173;UBERON:0006601!1.63e-15!173;UBERON:0000033!1.88e-15!123;UBERON:0000481!1.17e-14!347;UBERON:0000153!2.33e-13!129;UBERON:0007811!2.33e-13!129;UBERON:0003056!5.57e-12!61;UBERON:0000062!6.63e-12!511;UBERON:0001869!1.71e-11!32;UBERON:0003075!5.58e-11!86;UBERON:0007284!5.58e-11!86;UBERON:0001893!1.04e-10!34;UBERON:0002020!1.44e-10!34;UBERON:0003528!1.44e-10!34;UBERON:0002346!2.70e-10!90;UBERON:0002791!3.74e-10!33;UBERON:0000467!6.29e-10!625;UBERON:0000480!9.44e-10!626;UBERON:0000955!1.04e-09!69;UBERON:0006238!1.04e-09!69;UBERON:0005743!1.55e-09!86;UBERON:0000922!1.81e-09!612;UBERON:0000468!2.25e-09!659;UBERON:0002780!3.72e-09!41;UBERON:0001890!3.72e-09!41;UBERON:0006240!3.72e-09!41;UBERON:0000073!4.04e-09!94;UBERON:0001016!4.04e-09!94;UBERON:0001017!1.12e-08!82;UBERON:0002050!1.20e-08!605;UBERON:0005423!1.20e-08!605;UBERON:0003080!1.33e-08!42;UBERON:0000923!1.43e-08!604;UBERON:0005291!1.43e-08!604;UBERON:0006598!1.43e-08!604;UBERON:0002532!1.43e-08!604;UBERON:0000956!2.47e-08!25;UBERON:0000203!2.47e-08!25;UBERON:0001950!2.68e-08!20;UBERON:0002619!6.21e-08!22;UBERON:0002616!1.49e-07!59;UBERON:0001049!2.00e-07!57;UBERON:0005068!2.00e-07!57;UBERON:0006241!2.00e-07!57;UBERON:0007135!2.00e-07!57;UBERON:0000477!5.60e-07!286;UBERON:0003102!6.49e-07!95;UBERON:0006554!7.64e-07!44|ontology_enrichment_uberon_v019=UBERON:0001869;7.68e-15;32!UBERON:0001893;1.29e-13;34!UBERON:0002791;1.42e-13;32!UBERON:0003528;3.27e-13;34!UBERON:0002020;3.27e-13;34!UBERON:0001950;2.57e-12;20!UBERON:0000956;2.67e-12;25!UBERON:0000203;2.67e-12;25!UBERON:0002619;3.70e-12;22!UBERON:0002780;1.59e-08;41!UBERON:0001890;1.59e-08;41!UBERON:0004211;6.40e-08;10!UBERON:0009773;6.40e-08;10!UBERON:0001231;6.40e-08;10!UBERON:0004810;6.40e-08;10!UBERON:0006554;6.98e-08;30!UBERON:0001008;6.98e-08;30!UBERON:0000486;7.31e-08;12!UBERON:0000200;4.73e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.16e-16,32;UBERON:0001893,3.61e-15,34;UBERON:0002791,5.12e-15,32;UBERON:0003528,7.40e-15,34;UBERON:0002020,7.40e-15,34;UBERON:0010371,1.21e-13,104;UBERON:0004121,4.40e-13,171;UBERON:0000924,4.40e-13,171;UBERON:0006601,4.40e-13,171;UBERON:0003056,4.40e-13,61;UBERON:0001950,1.52e-12,20;UBERON:0000956,1.76e-12,25;UBERON:0000203,1.76e-12,25;UBERON:0002619,2.27e-12,22;UBERON:0002780,3.76e-12,41;UBERON:0001890,3.76e-12,41;UBERON:0003080,3.76e-12,41;UBERON:0006240,3.76e-12,41;UBERON:0000119,7.83e-10,309;UBERON:0000483,1.60e-09,306;UBERON:0000073,4.44e-09,53;UBERON:0002616,4.44e-09,53;UBERON:0000955,8.48e-09,68;UBERON:0006238,8.48e-09,68;UBERON:0006554,1.21e-08,47;UBERON:0010314,1.82e-08,132;UBERON:0001008,2.66e-08,48;UBERON:0003075,3.35e-08,82;UBERON:0007284,3.35e-08,82;UBERON:0001017,3.62e-08,81;UBERON:0001049,3.82e-08,56;UBERON:0005068,3.82e-08,56;UBERON:0006241,3.82e-08,56;UBERON:0007135,3.82e-08,56;UBERON:0004810,6.93e-08,10;UBERON:0001016,1.46e-07,89;UBERON:0002346,2.43e-07,86;UBERON:0000200,4.05e-07,6;UBERON:0000922,8.33e-07,592;UBERON:0003102,8.97e-07,99|phase1_expression=0,0,0.140954404095971,2.00146596706261,0,0,0,0,0,0.982935746006035,2.09340350391728,0.655324116390517,0,0.247532705920093,0,0.672325146451775,1.20538905604795,0,0,0.61560529038394,0.204000691244253,0,0.286235987131057,1.23186982565596,1.50651167513763,0.0764134057479513,0.0821005894499457,0,0,0,0,7.35536979583142,13.8554722637995,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,0.50133791063589,0,0,0,0.567208902984407,0.6651881923876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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=400745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28819 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZV89 | |||
|association_with_transcript=65bp_to_ENST00000447746_5end | |||
|description=CAGE_peak_1_at_SH2D5_5end | |||
|id=chr1:21058626..21058705,- | |||
|ontology_enrichment_celltype=CL:0000066!7.66e-19!254;CL:0002321!1.02e-14!248;CL:0000220!4.33e-14!246;CL:0002076!2.72e-09!43;CL:0000223!1.50e-07!59;CL:0002159!2.79e-07!13;CL:0000221!3.05e-07!71;CL:0002368!3.73e-07!13;CL:0000076!4.62e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002159;3.73e-10;14!CL:0002076;4.33e-09;42!CL:0002368;2.83e-08;13!CL:1000507;6.40e-08;10!CL:1000494;6.40e-08;10!CL:0000240;8.21e-07;6!CL:0000311;8.21e-07;6!CL:0000079;8.21e-07;6!CL:0000237;8.21e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.20e-14,253;CL:0002076,4.68e-11,42;CL:0002159,6.25e-10,14;CL:0002321,1.78e-08,250;CL:0002368,2.47e-08,13;CL:1000507,6.93e-08,10;CL:1000494,6.93e-08,10;CL:0000223,1.42e-07,58;CL:0000076,6.22e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;8.21e-07;6!CL:0000114;8.21e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.70e-20!365;UBERON:0000119!7.21e-18!312;UBERON:0000483!1.09e-17!309;UBERON:0000064!1.08e-16!219;UBERON:0004121!4.55e-16!169;UBERON:0000924!1.63e-15!173;UBERON:0006601!1.63e-15!173;UBERON:0000033!1.88e-15!123;UBERON:0000481!1.17e-14!347;UBERON:0000153!2.33e-13!129;UBERON:0007811!2.33e-13!129;UBERON:0003056!5.57e-12!61;UBERON:0000062!6.63e-12!511;UBERON:0001869!1.71e-11!32;UBERON:0003075!5.58e-11!86;UBERON:0007284!5.58e-11!86;UBERON:0001893!1.04e-10!34;UBERON:0002020!1.44e-10!34;UBERON:0003528!1.44e-10!34;UBERON:0002346!2.70e-10!90;UBERON:0002791!3.74e-10!33;UBERON:0000467!6.29e-10!625;UBERON:0000480!9.44e-10!626;UBERON:0000955!1.04e-09!69;UBERON:0006238!1.04e-09!69;UBERON:0005743!1.55e-09!86;UBERON:0000922!1.81e-09!612;UBERON:0000468!2.25e-09!659;UBERON:0002780!3.72e-09!41;UBERON:0001890!3.72e-09!41;UBERON:0006240!3.72e-09!41;UBERON:0000073!4.04e-09!94;UBERON:0001016!4.04e-09!94;UBERON:0001017!1.12e-08!82;UBERON:0002050!1.20e-08!605;UBERON:0005423!1.20e-08!605;UBERON:0003080!1.33e-08!42;UBERON:0000923!1.43e-08!604;UBERON:0005291!1.43e-08!604;UBERON:0006598!1.43e-08!604;UBERON:0002532!1.43e-08!604;UBERON:0000956!2.47e-08!25;UBERON:0000203!2.47e-08!25;UBERON:0001950!2.68e-08!20;UBERON:0002619!6.21e-08!22;UBERON:0002616!1.49e-07!59;UBERON:0001049!2.00e-07!57;UBERON:0005068!2.00e-07!57;UBERON:0006241!2.00e-07!57;UBERON:0007135!2.00e-07!57;UBERON:0000477!5.60e-07!286;UBERON:0003102!6.49e-07!95;UBERON:0006554!7.64e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.68e-15;32!UBERON:0001893;1.29e-13;34!UBERON:0002791;1.42e-13;32!UBERON:0003528;3.27e-13;34!UBERON:0002020;3.27e-13;34!UBERON:0001950;2.57e-12;20!UBERON:0000956;2.67e-12;25!UBERON:0000203;2.67e-12;25!UBERON:0002619;3.70e-12;22!UBERON:0002780;1.59e-08;41!UBERON:0001890;1.59e-08;41!UBERON:0004211;6.40e-08;10!UBERON:0009773;6.40e-08;10!UBERON:0001231;6.40e-08;10!UBERON:0004810;6.40e-08;10!UBERON:0006554;6.98e-08;30!UBERON:0001008;6.98e-08;30!UBERON:0000486;7.31e-08;12!UBERON:0000200;4.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.16e-16,32;UBERON:0001893,3.61e-15,34;UBERON:0002791,5.12e-15,32;UBERON:0003528,7.40e-15,34;UBERON:0002020,7.40e-15,34;UBERON:0010371,1.21e-13,104;UBERON:0004121,4.40e-13,171;UBERON:0000924,4.40e-13,171;UBERON:0006601,4.40e-13,171;UBERON:0003056,4.40e-13,61;UBERON:0001950,1.52e-12,20;UBERON:0000956,1.76e-12,25;UBERON:0000203,1.76e-12,25;UBERON:0002619,2.27e-12,22;UBERON:0002780,3.76e-12,41;UBERON:0001890,3.76e-12,41;UBERON:0003080,3.76e-12,41;UBERON:0006240,3.76e-12,41;UBERON:0000119,7.83e-10,309;UBERON:0000483,1.60e-09,306;UBERON:0000073,4.44e-09,53;UBERON:0002616,4.44e-09,53;UBERON:0000955,8.48e-09,68;UBERON:0006238,8.48e-09,68;UBERON:0006554,1.21e-08,47;UBERON:0010314,1.82e-08,132;UBERON:0001008,2.66e-08,48;UBERON:0003075,3.35e-08,82;UBERON:0007284,3.35e-08,82;UBERON:0001017,3.62e-08,81;UBERON:0001049,3.82e-08,56;UBERON:0005068,3.82e-08,56;UBERON:0006241,3.82e-08,56;UBERON:0007135,3.82e-08,56;UBERON:0004810,6.93e-08,10;UBERON:0001016,1.46e-07,89;UBERON:0002346,2.43e-07,86;UBERON:0000200,4.05e-07,6;UBERON:0000922,8.33e-07,592;UBERON:0003102,8.97e-07,99 | |||
|phase1_expression=0,0,0.140954404095971,2.00146596706261,0,0,0,0,0,0.982935746006035,2.09340350391728,0.655324116390517,0,0.247532705920093,0,0.672325146451775,1.20538905604795,0,0,0.61560529038394,0.204000691244253,0,0.286235987131057,1.23186982565596,1.50651167513763,0.0764134057479513,0.0821005894499457,0,0,0,0,7.35536979583142,13.8554722637995,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,0.50133791063589,0,0,0,0.567208902984407,0.665188192387692,0.351339142772504,1.17881167947941,9.4716774956061,5.56176664176644,0,0,0,0,0,0,0,3.4409383804245,0,0,0,0.825354125820202,0,1.03366703667732,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0.225222960966644,0,0,0.732806975721629,0,0,8.72188104285069,0,0.759783069987479,4.50191214764944,1.72101972449288,0.354668382198357,0.560677600142307,0,1.48000529050296,0,0.404132016209064,0.490385709340376,0.302714855289863,0,0.468642863667593,0.936480230490962,0.570471821544449,0.298897361103602,0.822041490506354,0.647491777472526,1.26405726032024,1.02077085627447,2.82518929817066,0.103325781175765,1.18800285728205,0.494533858557114,0,1.43723628363248,1.68336113954066,0.750711119231785,1.6623846929051,0,0.30648779579902,0.150238058906597,0.907457465280168,0.358779271377724,0,0.847727604638247,1.80054657650641,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,1.26216887122057,0.184099797284599,0,0.355009592516614,0.604512589365842,0.67824236924195,10.2428252176547,4.36393792945335,8.03052867089211,1.95157929807353,3.31324420803713,1.62671520017326,1.34759371519982,0.756962552626885,1.09493207722749,0,0,2.76269842704961,0,0,0.709840800239063,0,0.241011029883482,0.55146986366197,0.653638332277218,0.237270619111097,0.134831308160164,0.392442930250692,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0.245976877086227,0.857839051492628,10.3165268284108,8.99214026060957,14.2751140824516,7.68484094815796,5.86454949558584,4.15973914111831,0,0.579652024875384,0.117408694235822,0.721832238805369,0,0.190254152234598,0,0,0,0,0,7.49870671894216,3.02367830757947,2.26840155587818,3.94057499892532,6.1033127087932,11.8848630541215,0,0,0,0,0.37872730027914,0.126995788584338,0.763976851116555,0,0,0.616964956219941,0,0,1.00917975910825,0,1.1734125731352,1.16344544182,0,0,2.12750493267896,1.04007436911366,0.514414748524284,0,0.266422179016099,0.857867961948885,0,0,0,0.710783897485092,0,1.20575750823834,0.871533458600294,1.29964888536674,0,0,0,0.718874566474748,1.14861935834114,0,1.88215698667853,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0.623912584592421,0.892144943985809,1.10391690523754,0.819989904948992,0,2.27407504055985,1.03473071292505,0,0.737476674166813,1.82455590382974,0.979005787313703,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0.460385919864187,0,0.128139149255701,0.511707249066704,0.482561763430822,1.48418066444991,0,0,0.410635780069046,1.55776328755086,0.116210378459959,1.20859449591622,2.80709058424599,4.05156351317944,1.37777337797528,2.73136752010076,3.93373244878272,3.15839729035188,1.61732207919271,9.41219723012226,4.38417673959782,0.73886140225013,0,0.680374821106063,0.863663664408557,0,2.16757150035082,5.01689773854853,5.60727800699084,2.49322802678617,5.37299411333228,0,0,4.87255237721139,1.64007322849853,1.95227036798582,2.88514832613622,0.0915694648183434,0,9.18824860793876,6.50060246036521,0,0.290012154876366,0.462145851343933,0.614014698904518,1.10269257987624,0,0.145016693914229,0.681813019328807,0.0890320356467374,2.97512847649761,4.42037154939744,10.5918551370505,5.56367794705525,0.464845549297286,0.94443704049192,0.6970372701606,1.23213432070436,1.59691809095107,0,0,0,0.744316738719335,0.316379424718726,1.14378116354295,4.09436466098134,0,0.636406495851874,0.78494864019923,0.539617372749944,1.37268514868027,1.88499843753098,0.606547444719948,0,0.421258456238981,1.46290121726877,0.731140468893853,0,0.409499734223957,0.565621727814851,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0,0.860468113224309,0.589494246078727,0,2.12856638442359,0.211107635297664,0,0.379473173765715,0.349934720244983,6.25443732715828,7.37332503089366,11.9780083347455,3.57746442951761,3.87454835404107,10.1082885400575,4.43430153536676,3.67557440331135,0,0,0,0,0,0,0,0,2.13648142254946,0,0.735120647943095,0.371606350251437,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,2.30584991324076,0,0.852408440419239,0.23874448473769,0,0.614321404198464,2.98244294329889,3.65740482667333,2.33748280548102,0,0.844501632511974,0,0,0,0.715880777515084,0.123084805461069,0.933118762985422,0.0898683511473268,0.716084698702437,0,0,0,2.22273980289274,1.93866549219044,7.0503754603007,1.99613798001194,0.260427761085233,0,0,1.365521379426,0,0,5.5158939718634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| |||
|short_description=p1@SH2D5 | |||
}} |
Revision as of 03:27, 12 September 2013
Short description: | p1@SH2D5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SH2D5_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_ENST00000447746_5end |
EntrezGene: | SH2D5 |
HGNC: | 28819 |
UniProt: | Q6ZV89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.20e-14 | 253 |
endo-epithelial cell | 4.68e-11 | 42 |
general ecto-epithelial cell | 6.25e-10 | 14 |
embryonic cell | 1.78e-08 | 250 |
respiratory epithelial cell | 2.47e-08 | 13 |
kidney tubule cell | 6.93e-08 | 10 |
nephron tubule epithelial cell | 6.93e-08 | 10 |
endodermal cell | 1.42e-07 | 58 |
squamous epithelial cell | 6.22e-07 | 63 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.