FFCP PHASE1:Hg19::chr1:207510129..207510165,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C531|description=CAGE_peak_at_chr1:207510129..207510165,-|id=chr1:207510129..207510165,-|ontology_enrichment_celltype=CL:0000860!4.86e-18!45;CL:0002057!5.13e-16!42;CL:0002009!9.64e-11!65;CL:0000766!2.79e-10!76;CL:0002194!6.52e-10!63;CL:0000576!6.52e-10!63;CL:0000040!6.52e-10!63;CL:0000559!6.52e-10!63;CL:0000839!1.67e-09!70;CL:0000557!2.34e-09!71;CL:0000738!3.64e-09!140;CL:0002031!1.21e-08!124;CL:0002087!1.24e-08!119;CL:0000763!6.94e-08!112;CL:0000049!6.94e-08!112;CL:0002032!1.06e-07!165;CL:0000837!1.06e-07!165;CL:0000037!4.33e-07!172;CL:0000566!4.33e-07!172|ontology_enrichment_celltype_v019=CL:0000860;5.09e-23;33!CL:0002057;5.09e-23;33!CL:0000473;8.84e-15;39!CL:0000234;8.84e-15;39!CL:0000576;1.61e-11;48!CL:0002537;7.67e-08;5!CL:0000766;2.33e-07;69|ontology_enrichment_celltype_v019_2=CL:0000860,3.14e-23,42;CL:0002057,3.14e-23,42;CL:0000473,4.19e-19,48;CL:0000234,4.19e-19,48;CL:0002009,4.38e-16,61;CL:0000766,1.56e-14,72;CL:0002194,1.86e-14,59;CL:0000576,1.86e-14,59;CL:0000040,1.86e-14,59;CL:0000559,1.86e-14,59;CL:0000557,8.68e-14,67;CL:0000839,7.26e-13,66;CL:0000763,3.35e-11,108;CL:0000049,3.35e-11,108;CL:0002031,1.40e-09,120;CL:0000738,2.87e-09,136;CL:0002032,1.37e-08,161;CL:0000837,1.37e-08,161;CL:0002087,1.72e-08,115;CL:0000037,1.00e-07,168;CL:0002537,1.84e-07,5;CL:0000988,3.33e-07,177|ontology_enrichment_development_v019=CL:0002057;5.65e-17;42|ontology_enrichment_disease=DOID:305!1.99e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.56e-09!102;UBERON:0003061!8.56e-09!102;UBERON:0002193!1.79e-08!112;UBERON:0001737!1.91e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;3.82e-14;9!UBERON:0001557;3.82e-14;9!UBERON:0005631;9.44e-09;10!UBERON:0000158;9.44e-09;10|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.13e-14,9;UBERON:0002390,6.52e-12,98;UBERON:0003061,6.52e-12,98;UBERON:0002371,4.60e-11,76;UBERON:0002193,1.57e-10,108;UBERON:0001474,1.31e-09,82;UBERON:0002405,3.91e-08,93;UBERON:0004765,5.30e-08,90;UBERON:0001434,4.86e-07,100;UBERON:0005631,6.03e-07,14;UBERON:0000158,6.03e-07,14|phase1_expression=0.908391896352783,0.428201047781966,1.40954404095971,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0,0,0.602694528023977,1.46062018077475,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0.164201178899891,0,0,0.767658796194425,0.77408061658038,0,0,0,0.309868802321207,0.284338464974843,0,1.10799081706375,2.00544447470142,0.868043482863407,0,0,0,1.89017710413434,0.377875943688809,0.242584061187816,1.62700325833979,1.6446715520873,1.54853185447552,3.74000110018796,1.7931249457037,1.89185783910868,5.5159308917859,3.22742341791913,1.35426486594342,3.38836211176688,1.63743690034707,1.34834090667051,8.57034898638527,2.24650318953266,8.31138263538754,0.989553900560148,1.19678194572979,0.852449501065388,6.38460324982885,2.26954089876456,2.4912889959823,2.51248665256743,1.5644487552606,1.95469960234605,8.47559303686716,1.84138817993782,4.1140110367315,0.845021145247767,0.850417199860174,0.838634582033504,1.01095768031846,0.750884464207532,0,0,0,1.0959849225878,0,0.546138611262131,0,1.28019066769952,1.20118796110804,0,0.661044872784862,0,1.1384259382189,1.17447437874188,1.52909291250092,0,0.560508562981536,0.263384084775077,1.180258620683,1.17903228824749,0.822405995998037,0.334372990781356,0,0,0,0,0.294605907474837,0.443067789167242,0,0.640456598628376,0.910415432919148,1.15106533222573,1.10540007114339,0,0.889719378972363,0.802622484269139,1.04535523804977,0.339928028092699,0.383220493601921,0,0.253019692019503,1.59282707162048,0,0,0,0,0,0,0.821127996921047,0.403213486449465,0.534880391567015,1.30341963494519,0,1.34140171940727,0.255725123687061,1.0843174571537,0,1.15877215168659,0,3.40644409211845,0.283604451492204,0,0.351339142772504,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,1.19245312152671,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,2.20094433552054,0.208994966536811,0.516833518338658,0.35576626268671,0,1.20848795132744,1.52054421143703,0.488124115096339,0.735326160691737,0.81014194788176,0.17859945656816,0.44905874525234,0.450445921933289,0,0,0.732806975721629,1.31780417436063,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0.817309515567294,0,0,0,0.312160076830321,0,0.896692083310806,0.23486899728753,0,0.280901613404497,0,0.245668634623536,0,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.907457465280168,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,6.27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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C531 | |||
|description=CAGE_peak_at_chr1:207510129..207510165,- | |||
|id=chr1:207510129..207510165,- | |||
|ontology_enrichment_celltype=CL:0000860!4.86e-18!45;CL:0002057!5.13e-16!42;CL:0002009!9.64e-11!65;CL:0000766!2.79e-10!76;CL:0002194!6.52e-10!63;CL:0000576!6.52e-10!63;CL:0000040!6.52e-10!63;CL:0000559!6.52e-10!63;CL:0000839!1.67e-09!70;CL:0000557!2.34e-09!71;CL:0000738!3.64e-09!140;CL:0002031!1.21e-08!124;CL:0002087!1.24e-08!119;CL:0000763!6.94e-08!112;CL:0000049!6.94e-08!112;CL:0002032!1.06e-07!165;CL:0000837!1.06e-07!165;CL:0000037!4.33e-07!172;CL:0000566!4.33e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.09e-23;33!CL:0002057;5.09e-23;33!CL:0000473;8.84e-15;39!CL:0000234;8.84e-15;39!CL:0000576;1.61e-11;48!CL:0002537;7.67e-08;5!CL:0000766;2.33e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.14e-23,42;CL:0002057,3.14e-23,42;CL:0000473,4.19e-19,48;CL:0000234,4.19e-19,48;CL:0002009,4.38e-16,61;CL:0000766,1.56e-14,72;CL:0002194,1.86e-14,59;CL:0000576,1.86e-14,59;CL:0000040,1.86e-14,59;CL:0000559,1.86e-14,59;CL:0000557,8.68e-14,67;CL:0000839,7.26e-13,66;CL:0000763,3.35e-11,108;CL:0000049,3.35e-11,108;CL:0002031,1.40e-09,120;CL:0000738,2.87e-09,136;CL:0002032,1.37e-08,161;CL:0000837,1.37e-08,161;CL:0002087,1.72e-08,115;CL:0000037,1.00e-07,168;CL:0002537,1.84e-07,5;CL:0000988,3.33e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.65e-17;42 | |||
|ontology_enrichment_disease=DOID:305!1.99e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.56e-09!102;UBERON:0003061!8.56e-09!102;UBERON:0002193!1.79e-08!112;UBERON:0001737!1.91e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.82e-14;9!UBERON:0001557;3.82e-14;9!UBERON:0005631;9.44e-09;10!UBERON:0000158;9.44e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.13e-14,9;UBERON:0002390,6.52e-12,98;UBERON:0003061,6.52e-12,98;UBERON:0002371,4.60e-11,76;UBERON:0002193,1.57e-10,108;UBERON:0001474,1.31e-09,82;UBERON:0002405,3.91e-08,93;UBERON:0004765,5.30e-08,90;UBERON:0001434,4.86e-07,100;UBERON:0005631,6.03e-07,14;UBERON:0000158,6.03e-07,14 | |||
|phase1_expression=0.908391896352783,0.428201047781966,1.40954404095971,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0,0,0.602694528023977,1.46062018077475,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0.164201178899891,0,0,0.767658796194425,0.77408061658038,0,0,0,0.309868802321207,0.284338464974843,0,1.10799081706375,2.00544447470142,0.868043482863407,0,0,0,1.89017710413434,0.377875943688809,0.242584061187816,1.62700325833979,1.6446715520873,1.54853185447552,3.74000110018796,1.7931249457037,1.89185783910868,5.5159308917859,3.22742341791913,1.35426486594342,3.38836211176688,1.63743690034707,1.34834090667051,8.57034898638527,2.24650318953266,8.31138263538754,0.989553900560148,1.19678194572979,0.852449501065388,6.38460324982885,2.26954089876456,2.4912889959823,2.51248665256743,1.5644487552606,1.95469960234605,8.47559303686716,1.84138817993782,4.1140110367315,0.845021145247767,0.850417199860174,0.838634582033504,1.01095768031846,0.750884464207532,0,0,0,1.0959849225878,0,0.546138611262131,0,1.28019066769952,1.20118796110804,0,0.661044872784862,0,1.1384259382189,1.17447437874188,1.52909291250092,0,0.560508562981536,0.263384084775077,1.180258620683,1.17903228824749,0.822405995998037,0.334372990781356,0,0,0,0,0.294605907474837,0.443067789167242,0,0.640456598628376,0.910415432919148,1.15106533222573,1.10540007114339,0,0.889719378972363,0.802622484269139,1.04535523804977,0.339928028092699,0.383220493601921,0,0.253019692019503,1.59282707162048,0,0,0,0,0,0,0.821127996921047,0.403213486449465,0.534880391567015,1.30341963494519,0,1.34140171940727,0.255725123687061,1.0843174571537,0,1.15877215168659,0,3.40644409211845,0.283604451492204,0,0.351339142772504,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,1.19245312152671,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,2.20094433552054,0.208994966536811,0.516833518338658,0.35576626268671,0,1.20848795132744,1.52054421143703,0.488124115096339,0.735326160691737,0.81014194788176,0.17859945656816,0.44905874525234,0.450445921933289,0,0,0.732806975721629,1.31780417436063,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0.817309515567294,0,0,0,0.312160076830321,0,0.896692083310806,0.23486899728753,0,0.280901613404497,0,0.245668634623536,0,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.907457465280168,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,6.27026040211173,4.38320194203064,1.44606617930089,6.17646247301406,5.88274499049497,3.32178866755535,6.87639671616838,6.08286541888573,3.8474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0.402115889646523,0.185176890317059,0,0,2.88662684050547,0.115930404975077,0.469634776943287,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0.53735113621709,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.37872730027914,0,0,0,0,0,0.600686115687835,0,0,0,0,0.387815147273333,0,0,2.12750493267896,1.04007436911366,0.257207374262142,0,0,0,0,0,0.65147236858747,0.355391948742546,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0,0.896681151948218,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,4.49404214368309,8.97484377612075,2.90090859405225,0.12269149171914,0,0,0.623912584592421,0.892144943985809,1.41932173530541,0,0,0,0,0,0,0.434418072340414,0.195801157462741,0,0.413536052245775,0.862856803274467,0.320182673410333,0.303127571446259,0,0,1.24053903909388,0.460385919864187,1.40330047216537,2.56278298511402,0.511707249066704,3.05622450172854,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0.232420756919918,0.725156697549733,0,1.10497186723076,0.574072240823034,0.728364672026868,0.786746489756545,0,0.385076685522074,0,0,0.316654886678627,0,0.340187410553031,0.215915916102139,0,0,0,0.254876273045038,0,0,0.657779629937804,1.0457418040996,0.512900250232778,0,0,1.03041011647722,0.54941678891006,0.165018999841176,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.137836572484531,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.910420027699949,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0.848432591722276,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,2.32218398827431,0.658589785919804,0,0,0.192444225451024,0,0,0.847294206991012,0.43050537267123,0,0,0.229723400206959,0,0,1.70894156152249,1.90585420366231,3.29089818468955,1.94541993357815,0.540031437238115,2.37937552888281,0.106824071127473,0,0.980160863924127,0.743212700502875,0.28853842595289,0.142283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| |||
|short_description=p@chr1:207510129..207510165,- | |||
}} |
Revision as of 03:15, 12 September 2013
Short description: | p@chr1:207510129..207510165, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:207510129..207510165, - |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.14e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-23 | 42 |
defensive cell | 4.19e-19 | 48 |
phagocyte | 4.19e-19 | 48 |
macrophage dendritic cell progenitor | 4.38e-16 | 61 |
myeloid leukocyte | 1.56e-14 | 72 |
monopoietic cell | 1.86e-14 | 59 |
monocyte | 1.86e-14 | 59 |
monoblast | 1.86e-14 | 59 |
promonocyte | 1.86e-14 | 59 |
granulocyte monocyte progenitor cell | 8.68e-14 | 67 |
myeloid lineage restricted progenitor cell | 7.26e-13 | 66 |
myeloid cell | 3.35e-11 | 108 |
common myeloid progenitor | 3.35e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 1.40e-09 | 120 |
leukocyte | 2.87e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.37e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-08 | 161 |
nongranular leukocyte | 1.72e-08 | 115 |
hematopoietic stem cell | 1.00e-07 | 168 |
amnion mesenchymal stem cell | 1.84e-07 | 5 |
hematopoietic cell | 3.33e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.13e-14 | 9 |
hematopoietic system | 6.52e-12 | 98 |
blood island | 6.52e-12 | 98 |
bone marrow | 4.60e-11 | 76 |
hemolymphoid system | 1.57e-10 | 108 |
bone element | 1.31e-09 | 82 |
immune system | 3.91e-08 | 93 |
skeletal element | 5.30e-08 | 90 |
skeletal system | 4.86e-07 | 100 |
extraembryonic membrane | 6.03e-07 | 14 |
membranous layer | 6.03e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.